RNA–Protein interactions for RNA: ENST00000627109.2

CTNNA1-244, Transcript of catenin alpha 1, humanhuman

TSL 5 BASIC

Gene CTNNA1, Length 3,831 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-244ENST00000627109 ATP2A3Q93084 1043 aa7.3□□□□□ -1.24
CTNNA1-244ENST00000627109 TTC1Q99614 292 aa7.3□□□□□ -1.24
CTNNA1-244ENST00000627109 RTP3Q9BQQ7 232 aa7.3□□□□□ -1.24
CTNNA1-244ENST00000627109 KIFC1Q9BW19 673 aa7.3□□□□□ -1.24
CTNNA1-244ENST00000627109 OSBPL1AQ9BXW6 950 aa7.3□□□□□ -1.24
CTNNA1-244ENST00000627109 YIPF3Q9GZM5 350 aa7.3□□□□□ -1.24
CTNNA1-244ENST00000627109 C11orf49Q9H6J7 331 aa7.3□□□□□ -1.24
CTNNA1-244ENST00000627109 LRRC40Q9H9A6 602 aa7.3□□□□□ -1.24
CTNNA1-244ENST00000627109 NMRK1Q9NWW6 199 aa7.3□□□□□ -1.24
CTNNA1-244ENST00000627109 SOX13Q9UN79 622 aa7.3□□□□□ -1.24
CTNNA1-244ENST00000627109 TBC1D30Q9Y2I9 924 aa7.3□□□□□ -1.24
CTNNA1-244ENST00000627109 HUS1O60921 280 aa7.3□□□□□ -1.24
CTNNA1-244ENST00000627109 TBX10O75333 385 aa7.3□□□□□ -1.24
CTNNA1-244ENST00000627109 PAX7P23759 505 aa7.3□□□□□ -1.24
CTNNA1-244ENST00000627109 GJA8P48165 433 aa7.3□□□□□ -1.24
CTNNA1-244ENST00000627109 SLC1A6P48664 564 aa7.3□□□□□ -1.24
CTNNA1-244ENST00000627109 LHX1P48742 406 aa7.3□□□□□ -1.24
CTNNA1-244ENST00000627109 IDH3AP50213 366 aa7.3□□□□□ -1.24
CTNNA1-244ENST00000627109 PRKAA2P54646 552 aa7.3□□□□□ -1.24
CTNNA1-244ENST00000627109 PURAQ00577 322 aaKnown RBP7.3□□□□□ -1.24
CTNNA1-244ENST00000627109 DEUP1Q05D60 604 aa7.3□□□□□ -1.24
CTNNA1-244ENST00000627109 IFRD2Q12894 506 aaPredicted RBP7.3□□□□□ -1.24
CTNNA1-244ENST00000627109 RCN1Q15293 331 aa7.3□□□□□ -1.24
CTNNA1-244ENST00000627109 TRIM60Q495X7 471 aa7.3□□□□□ -1.24
CTNNA1-244ENST00000627109 N4BP2L1Q5TBK1 243 aaPredicted RBP7.3□□□□□ -1.24
CTNNA1-244ENST00000627109 METTL21CQ5VZV1 264 aa7.3□□□□□ -1.24
CTNNA1-244ENST00000627109 EPGNQ6UW88 154 aa7.3□□□□□ -1.24
CTNNA1-244ENST00000627109 EP400NLQ6ZTU2 488 aa7.3□□□□□ -1.24
CTNNA1-244ENST00000627109 HFE2Q6ZVN8 426 aa7.3□□□□□ -1.24
CTNNA1-244ENST00000627109 RSPH3Q86UC2 560 aa7.3□□□□□ -1.24
CTNNA1-244ENST00000627109 PANX3Q96QZ0 392 aa7.3□□□□□ -1.24
CTNNA1-244ENST00000627109 IER2Q9BTL4 223 aa7.3□□□□□ -1.24
CTNNA1-244ENST00000627109 ZNF395Q9H8N7 513 aaPredicted RBP7.3□□□□□ -1.24
CTNNA1-244ENST00000627109 CHST12Q9NRB3 414 aa7.3□□□□□ -1.24
CTNNA1-244ENST00000627109 KRT82Q9NSB4 513 aa7.3□□□□□ -1.24
CTNNA1-244ENST00000627109 OSER1Q9NX31 292 aa7.3□□□□□ -1.24
CTNNA1-244ENST00000627109 VPS28Q9UK41 221 aa7.3□□□□□ -1.24
CTNNA1-244ENST00000627109 BUD23O43709 281 aaKnown RBP7.3□□□□□ -1.24
CTNNA1-244ENST00000627109 CSPG5O95196 566 aa7.3□□□□□ -1.24
CTNNA1-244ENST00000627109 KLHL2O95198 593 aa7.3□□□□□ -1.24
CTNNA1-244ENST00000627109 TOP3BO95985 862 aaKnown RBP7.3□□□□□ -1.24
CTNNA1-244ENST00000627109 SBK3P0C264 359 aa7.3□□□□□ -1.24
CTNNA1-244ENST00000627109 NCF2P19878 526 aaPredicted RBP7.3□□□□□ -1.24
CTNNA1-244ENST00000627109 GLDCP23378 1020 aa7.3□□□□□ -1.24
CTNNA1-244ENST00000627109 CYP2C18P33260 490 aa7.3□□□□□ -1.24
CTNNA1-244ENST00000627109 GARSP41250 739 aaKnown RBP7.3□□□□□ -1.24
CTNNA1-244ENST00000627109 SERPINB8P50452 374 aa7.3□□□□□ -1.24
CTNNA1-244ENST00000627109 EPHB1P54762 984 aa7.3□□□□□ -1.24
CTNNA1-244ENST00000627109 MAP3K21Q5TCX8 1036 aa7.3□□□□□ -1.24
CTNNA1-244ENST00000627109 CES3Q6UWW8 571 aa7.3□□□□□ -1.24
CTNNA1-244ENST00000627109 GALNT7Q86SF2 657 aa7.3□□□□□ -1.24
CTNNA1-244ENST00000627109 CPSF7Q8N684 471 aaKnown RBP7.3□□□□□ -1.24
CTNNA1-244ENST00000627109 ACTRT2Q8TDY3 377 aa7.3□□□□□ -1.24
CTNNA1-244ENST00000627109 RNF34Q969K3 372 aa7.3□□□□□ -1.24
CTNNA1-244ENST00000627109 CCDC124Q96CT7 223 aaKnown RBP7.3□□□□□ -1.24
CTNNA1-244ENST00000627109 PPP1R36Q96LQ0 422 aa7.3□□□□□ -1.24
CTNNA1-244ENST00000627109 EBF4Q9BQW3 602 aa7.3□□□□□ -1.24
CTNNA1-244ENST00000627109 THTPAQ9BU02 230 aa7.3□□□□□ -1.24
CTNNA1-244ENST00000627109 CYP4F11Q9HBI6 524 aa7.3□□□□□ -1.24
CTNNA1-244ENST00000627109 TMPRSS4Q9NRS4 437 aa7.3□□□□□ -1.24
CTNNA1-244ENST00000627109 VTI1BQ9UEU0 232 aa7.3□□□□□ -1.24
CTNNA1-244ENST00000627109 CDH9Q9ULB4 789 aa7.3□□□□□ -1.24
CTNNA1-244ENST00000627109 ANKRD6Q9Y2G4 727 aa7.3□□□□□ -1.24
CTNNA1-244ENST00000627109 THSD7BQ9C0I4 1608 aa7.29□□□□□ -1.24
CTNNA1-244ENST00000627109 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP7.29□□□□□ -1.24
CTNNA1-244ENST00000627109 EEF2KO00418 725 aaKnown RBP7.29□□□□□ -1.24
CTNNA1-244ENST00000627109 F9P00740 461 aa7.29□□□□□ -1.24
CTNNA1-244ENST00000627109 CRABP2P29373 138 aa7.29□□□□□ -1.24
CTNNA1-244ENST00000627109 NDUFV1P49821 464 aa7.29□□□□□ -1.24
CTNNA1-244ENST00000627109 ABCE1P61221 599 aaKnown RBP7.29□□□□□ -1.24
CTNNA1-244ENST00000627109 IRGCQ6NXR0 463 aa7.29□□□□□ -1.24
CTNNA1-244ENST00000627109 C16orf46Q6P387 395 aa7.29□□□□□ -1.24
CTNNA1-244ENST00000627109 GPRIN1Q7Z2K8 1008 aa7.29□□□□□ -1.24
CTNNA1-244ENST00000627109 FAM35AQ86V20 835 aa7.29□□□□□ -1.24
CTNNA1-244ENST00000627109 ULK2Q8IYT8 1036 aa7.29□□□□□ -1.24
CTNNA1-244ENST00000627109 ADAMTS19Q8TE59 1207 aa7.29□□□□□ -1.24
CTNNA1-244ENST00000627109 ARMC5Q96C12 935 aa7.29□□□□□ -1.24
CTNNA1-244ENST00000627109 GPR22Q99680 433 aa7.29□□□□□ -1.24
CTNNA1-244ENST00000627109 SNX15Q9NRS6 342 aa7.29□□□□□ -1.24
CTNNA1-244ENST00000627109 SLC38A7Q9NVC3 462 aa7.29□□□□□ -1.24
CTNNA1-244ENST00000627109 TMEM216Q9P0N5 145 aa7.29□□□□□ -1.24
CTNNA1-244ENST00000627109 FNIP2Q9P278 1114 aa7.29□□□□□ -1.24
CTNNA1-244ENST00000627109 SLC7A8Q9UHI5 535 aa7.29□□□□□ -1.24
CTNNA1-244ENST00000627109 ASB3Q9Y575 518 aa7.29□□□□□ -1.24
CTNNA1-244ENST00000627109 MYO7AQ13402 2215 aa7.29□□□□□ -1.24
CTNNA1-244ENST00000627109 SNUPNO95149 360 aaKnown RBP7.29□□□□□ -1.24
CTNNA1-244ENST00000627109 ERCC2P18074 760 aa7.29□□□□□ -1.24
CTNNA1-244ENST00000627109 RPL9P32969 192 aaKnown RBP7.29□□□□□ -1.24
CTNNA1-244ENST00000627109 ADRA1AP35348 466 aa7.29□□□□□ -1.24
CTNNA1-244ENST00000627109 MRPS35P82673 323 aaKnown RBP7.29□□□□□ -1.24
CTNNA1-244ENST00000627109 THOC5Q13769 683 aaKnown RBP7.29□□□□□ -1.24
CTNNA1-244ENST00000627109 LRRC36Q1X8D7 754 aa7.29□□□□□ -1.24
CTNNA1-244ENST00000627109 ANKRD20A4Q4UJ75 823 aa7.29□□□□□ -1.24
CTNNA1-244ENST00000627109 DCAF6Q58WW2 860 aa7.29□□□□□ -1.24
CTNNA1-244ENST00000627109 CAPRIN2Q6IMN6 1127 aaKnown RBP7.29□□□□□ -1.24
CTNNA1-244ENST00000627109 DCLRE1AQ6PJP8 1040 aa7.29□□□□□ -1.24
CTNNA1-244ENST00000627109 LRRC74BQ6ZQY2 392 aa7.29□□□□□ -1.24
CTNNA1-244ENST00000627109 SERBP1Q8NC51 408 aaKnown RBP eCLIP7.29□□□□□ -1.24
CTNNA1-244ENST00000627109 PPP4R1Q8TF05 950 aa7.29□□□□□ -1.24
CTNNA1-244ENST00000627109 PTCD2Q8WV60 388 aaKnown RBP7.29□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms