RNA–Protein interactions for RNA: ENST00000623056.3

LDB3-209, Transcript of LIM domain binding 3, humanhuman

TSL 5 BASIC

Gene LDB3, Length 2,314 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-209ENST00000623056 COQ6Q9Y2Z9 468 aa14.33□□□□□ -0.12
LDB3-209ENST00000623056 TRIP11Q15643 1979 aa14.33□□□□□ -0.12
LDB3-209ENST00000623056 IGKV6D-21A0A0A0MT36 114 aa14.32□□□□□ -0.12
LDB3-209ENST00000623056 SOCS2O14508 198 aa14.32□□□□□ -0.12
LDB3-209ENST00000623056 TRIM24O15164 1050 aa14.32□□□□□ -0.12
LDB3-209ENST00000623056 APOA4P06727 396 aa14.32□□□□□ -0.12
LDB3-209ENST00000623056 YBX3P16989 372 aaKnown RBP eCLIP14.32□□□□□ -0.12
LDB3-209ENST00000623056 GOT1P17174 413 aa14.32□□□□□ -0.12
LDB3-209ENST00000623056 TMEM132AQ24JP5 1023 aa14.32□□□□□ -0.12
LDB3-209ENST00000623056 ZNF829Q3KNS6 432 aaPredicted RBP14.32□□□□□ -0.12
LDB3-209ENST00000623056 CYP2R1Q6VVX0 501 aa14.32□□□□□ -0.12
LDB3-209ENST00000623056 CHSY3Q70JA7 882 aa14.32□□□□□ -0.12
LDB3-209ENST00000623056 ZNF786Q8N393 782 aa14.32□□□□□ -0.12
LDB3-209ENST00000623056 OR52K1Q8NGK4 314 aa14.32□□□□□ -0.12
LDB3-209ENST00000623056 CXorf38Q8TB03 319 aa14.32□□□□□ -0.12
LDB3-209ENST00000623056 THAP11Q96EK4 314 aa14.32□□□□□ -0.12
LDB3-209ENST00000623056 ZNF668Q96K58 619 aaPredicted RBP14.32□□□□□ -0.12
LDB3-209ENST00000623056 APBA2Q99767 749 aa14.32□□□□□ -0.12
LDB3-209ENST00000623056 LRRC40Q9H9A6 602 aa14.32□□□□□ -0.12
LDB3-209ENST00000623056 SEPT10Q9P0V9 454 aa14.32□□□□□ -0.12
LDB3-209ENST00000623056 FER1L6Q2WGJ9 1857 aa14.32□□□□□ -0.12
LDB3-209ENST00000623056 PSME4Q14997 1843 aa14.32□□□□□ -0.12
LDB3-209ENST00000623056 HEATR9A2RTY3 570 aa14.32□□□□□ -0.12
LDB3-209ENST00000623056 FUOMA2VDF0 154 aa14.32□□□□□ -0.12
LDB3-209ENST00000623056 TRIM43BA6NCK2 446 aa14.32□□□□□ -0.12
LDB3-209ENST00000623056 PRORSD1PA6NEY8 169 aa14.32□□□□□ -0.12
LDB3-209ENST00000623056 PAPSS1O43252 624 aaPredicted RBP14.32□□□□□ -0.12
LDB3-209ENST00000623056 MFSD11O43934 449 aa14.32□□□□□ -0.12
LDB3-209ENST00000623056 IL18RAPO95256 599 aa14.32□□□□□ -0.12
LDB3-209ENST00000623056 GNAO1P09471 354 aa14.32□□□□□ -0.12
LDB3-209ENST00000623056 BTG3Q14201 252 aaPredicted RBP14.32□□□□□ -0.12
LDB3-209ENST00000623056 DALRD3Q5D0E6 543 aaKnown RBP14.32□□□□□ -0.12
LDB3-209ENST00000623056 FKBP1CQ5VVH2 108 aa14.32□□□□□ -0.12
LDB3-209ENST00000623056 JADE1Q6IE81 842 aa14.32□□□□□ -0.12
LDB3-209ENST00000623056 PPP4R4Q6NUP7 873 aa14.32□□□□□ -0.12
LDB3-209ENST00000623056 DCDC5Q6ZRR9 648 aa14.32□□□□□ -0.12
LDB3-209ENST00000623056 CCDC185Q8N715 623 aa14.32□□□□□ -0.12
LDB3-209ENST00000623056 TBC1D15Q8TC07 691 aa14.32□□□□□ -0.12
LDB3-209ENST00000623056 RDH11Q8TC12 318 aa14.32□□□□□ -0.12
LDB3-209ENST00000623056 DQX1Q8TE96 717 aaKnown RBP14.32□□□□□ -0.12
LDB3-209ENST00000623056 PPWD1Q96BP3 646 aaKnown RBP14.32□□□□□ -0.12
LDB3-209ENST00000623056 DUS3LQ96G46 650 aaKnown RBP14.32□□□□□ -0.12
LDB3-209ENST00000623056 B3GNT5Q9BYG0 378 aa14.32□□□□□ -0.12
LDB3-209ENST00000623056 RPF2Q9H7B2 306 aaKnown RBP14.32□□□□□ -0.12
LDB3-209ENST00000623056 FAM49BQ9NUQ9 324 aa14.32□□□□□ -0.12
LDB3-209ENST00000623056 SELENONQ9NZV5 590 aa14.32□□□□□ -0.12
LDB3-209ENST00000623056 USP3Q9Y6I4 520 aa14.32□□□□□ -0.12
LDB3-209ENST00000623056 LACTBL1A8MY62 500 aa14.31□□□□□ -0.12
LDB3-209ENST00000623056 TMEM233B4DJY2 109 aa14.31□□□□□ -0.12
LDB3-209ENST00000623056 H3BMQ9 156 aa14.31□□□□□ -0.12
LDB3-209ENST00000623056 TIPRLO75663 272 aa14.31□□□□□ -0.12
LDB3-209ENST00000623056 CABYRO75952 493 aa14.31□□□□□ -0.12
LDB3-209ENST00000623056 STAMBPO95630 424 aa14.31□□□□□ -0.12
LDB3-209ENST00000623056 ZNF12P17014 697 aa14.31□□□□□ -0.12
LDB3-209ENST00000623056 EPHX2P34913 555 aa14.31□□□□□ -0.12
LDB3-209ENST00000623056 GLRBP48167 497 aa14.31□□□□□ -0.12
LDB3-209ENST00000623056 PGGT1BP53609 377 aa14.31□□□□□ -0.12
LDB3-209ENST00000623056 OXCT1P55809 520 aa14.31□□□□□ -0.12
LDB3-209ENST00000623056 PRKCQQ04759 706 aa14.31□□□□□ -0.12
LDB3-209ENST00000623056 TRAP1Q12931 704 aaKnown RBP14.31□□□□□ -0.12
LDB3-209ENST00000623056 TTC33Q6PID6 262 aaPredicted RBP14.31□□□□□ -0.12
LDB3-209ENST00000623056 FAM83AQ86UY5 434 aa14.31□□□□□ -0.12
LDB3-209ENST00000623056 PYROXD2Q8N2H3 581 aa14.31□□□□□ -0.12
LDB3-209ENST00000623056 LRRC71Q8N4P6 559 aa14.31□□□□□ -0.12
LDB3-209ENST00000623056 ANKFN1Q8N957 763 aa14.31□□□□□ -0.12
LDB3-209ENST00000623056 ADAMTS16Q8TE57 1224 aa14.31□□□□□ -0.12
LDB3-209ENST00000623056 PLEKHA8Q96JA3 519 aa14.31□□□□□ -0.12
LDB3-209ENST00000623056 SCYL1Q96KG9 808 aa14.31□□□□□ -0.12
LDB3-209ENST00000623056 COG8Q96MW5 612 aa14.31□□□□□ -0.12
LDB3-209ENST00000623056 NPLQ9BXD5 320 aaPredicted RBP14.31□□□□□ -0.12
LDB3-209ENST00000623056 C1QTNF1Q9BXJ1 281 aa14.31□□□□□ -0.12
LDB3-209ENST00000623056 CDT1Q9H211 546 aa14.31□□□□□ -0.12
LDB3-209ENST00000623056 CXorf21Q9HAI6 301 aa14.31□□□□□ -0.12
LDB3-209ENST00000623056 GTF2IRD1Q9UHL9 959 aa14.31□□□□□ -0.12
LDB3-209ENST00000623056 SNX9Q9Y5X1 595 aa14.31□□□□□ -0.12
LDB3-209ENST00000623056 TANC1Q9C0D5 1861 aa14.31□□□□□ -0.12
LDB3-209ENST00000623056 ZCWPW2A0A1B0GU75 182 aa14.31□□□□□ -0.12
LDB3-209ENST00000623056 FBP2O00757 339 aa14.31□□□□□ -0.12
LDB3-209ENST00000623056 GIPC1O14908 333 aa14.31□□□□□ -0.12
LDB3-209ENST00000623056 AKAP10O43572 662 aa14.31□□□□□ -0.12
LDB3-209ENST00000623056 TIMM44O43615 452 aa14.31□□□□□ -0.12
LDB3-209ENST00000623056 USP12O75317 370 aa14.31□□□□□ -0.12
LDB3-209ENST00000623056 GABBR2O75899 941 aa14.31□□□□□ -0.12
LDB3-209ENST00000623056 OCM2P0CE71 109 aa14.31□□□□□ -0.12
LDB3-209ENST00000623056 OCMP0CE72 109 aaPredicted RBP14.31□□□□□ -0.12
LDB3-209ENST00000623056 PRKAA2P54646 552 aa14.31□□□□□ -0.12
LDB3-209ENST00000623056 C21orf59P57076 290 aa14.31□□□□□ -0.12
LDB3-209ENST00000623056 INCA1Q0VD86 236 aa14.31□□□□□ -0.12
LDB3-209ENST00000623056 MTA1Q13330 715 aa14.31□□□□□ -0.12
LDB3-209ENST00000623056 LRP8Q14114 963 aa14.31□□□□□ -0.12
LDB3-209ENST00000623056 DGKDQ16760 1214 aa14.31□□□□□ -0.12
LDB3-209ENST00000623056 IER5Q5VY09 327 aa14.31□□□□□ -0.12
LDB3-209ENST00000623056 XKR5Q6UX68 686 aa14.31□□□□□ -0.12
LDB3-209ENST00000623056 ZNF567Q8N184 647 aa14.31□□□□□ -0.12
LDB3-209ENST00000623056 PBXIP1Q96AQ6 731 aa14.31□□□□□ -0.12
LDB3-209ENST00000623056 HPDLQ96IR7 371 aa14.31□□□□□ -0.12
LDB3-209ENST00000623056 VPS39Q96JC1 886 aa14.31□□□□□ -0.12
LDB3-209ENST00000623056 EFHD1Q9BUP0 239 aa14.31□□□□□ -0.12
LDB3-209ENST00000623056 VRTNQ9H8Y1 702 aa14.31□□□□□ -0.12
LDB3-209ENST00000623056 SMOXQ9NWM0 555 aa14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 70.3 ms