RNA–Protein interactions for RNA: ENST00000616944.4

CBWD1-225, Transcript of COBW domain containing 1, humanhuman

TSL 2

Gene CBWD1, Length 1,648 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD1-225ENST00000616944 MYLKQ15746 1914 aa15.45■□□□□ 0.06
CBWD1-225ENST00000616944 MUC3AQ02505 3323 aa15.45■□□□□ 0.06
CBWD1-225ENST00000616944 CISD3P0C7P0 127 aa15.45■□□□□ 0.06
CBWD1-225ENST00000616944 PABPC1P11940 636 aaKnown RBP15.45■□□□□ 0.06
CBWD1-225ENST00000616944 H2AFXP16104 143 aaPredicted RBP15.45■□□□□ 0.06
CBWD1-225ENST00000616944 NFKB1P19838 968 aa15.45■□□□□ 0.06
CBWD1-225ENST00000616944 PSMB4P28070 264 aa15.45■□□□□ 0.06
CBWD1-225ENST00000616944 GDI1P31150 447 aa15.45■□□□□ 0.06
CBWD1-225ENST00000616944 CALCOCO2Q13137 446 aa15.45■□□□□ 0.06
CBWD1-225ENST00000616944 RUNX3Q13761 415 aa15.45■□□□□ 0.06
CBWD1-225ENST00000616944 RFTN1Q14699 578 aaPredicted RBP15.45■□□□□ 0.06
CBWD1-225ENST00000616944 LBRQ14739 615 aaKnown RBP15.45■□□□□ 0.06
CBWD1-225ENST00000616944 MORF4L2Q15014 288 aa15.45■□□□□ 0.06
CBWD1-225ENST00000616944 PARP6Q2NL67 630 aa15.45■□□□□ 0.06
CBWD1-225ENST00000616944 MARC1Q5VT66 337 aa15.45■□□□□ 0.06
CBWD1-225ENST00000616944 ALG1LQ6GMV1 187 aa15.45■□□□□ 0.06
CBWD1-225ENST00000616944 PID1Q7Z2X4 250 aa15.45■□□□□ 0.06
CBWD1-225ENST00000616944 HOOK3Q86VS8 718 aa15.45■□□□□ 0.06
CBWD1-225ENST00000616944 GSPT2Q8IYD1 628 aaKnown RBP15.45■□□□□ 0.06
CBWD1-225ENST00000616944 PGBD5Q8N414 524 aa15.45■□□□□ 0.06
CBWD1-225ENST00000616944 CPA6Q8N4T0 437 aa15.45■□□□□ 0.06
CBWD1-225ENST00000616944 NAT8LQ8N9F0 302 aa15.45■□□□□ 0.06
CBWD1-225ENST00000616944 BBOF1Q8ND07 529 aa15.45■□□□□ 0.06
CBWD1-225ENST00000616944 USP33Q8TEY7 942 aa15.45■□□□□ 0.06
CBWD1-225ENST00000616944 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP15.45■□□□□ 0.06
CBWD1-225ENST00000616944 PRCCQ92733 491 aaPredicted RBP15.45■□□□□ 0.06
CBWD1-225ENST00000616944 C2orf49Q9BVC5 232 aaPredicted RBP15.45■□□□□ 0.06
CBWD1-225ENST00000616944 TRMT61BQ9BVS5 477 aaKnown RBP15.45■□□□□ 0.06
CBWD1-225ENST00000616944 ETNK1Q9HBU6 452 aa15.45■□□□□ 0.06
CBWD1-225ENST00000616944 PRDM6Q9NQX0 595 aa15.45■□□□□ 0.06
CBWD1-225ENST00000616944 RBM22Q9NW64 420 aaKnown RBP eCLIP15.45■□□□□ 0.06
CBWD1-225ENST00000616944 GTSE1Q9NYZ3 720 aa15.45■□□□□ 0.06
CBWD1-225ENST00000616944 SHOC2Q9UQ13 582 aa15.45■□□□□ 0.06
CBWD1-225ENST00000616944 SLC27A6Q9Y2P4 619 aa15.45■□□□□ 0.06
CBWD1-225ENST00000616944 CCDC151A5D8V7 595 aa15.44■□□□□ 0.06
CBWD1-225ENST00000616944 TRIM24O15164 1050 aa15.44■□□□□ 0.06
CBWD1-225ENST00000616944 TULP3O75386 442 aa15.44■□□□□ 0.06
CBWD1-225ENST00000616944 TMEM63AO94886 807 aa15.44■□□□□ 0.06
CBWD1-225ENST00000616944 FDFT1P37268 417 aa15.44■□□□□ 0.06
CBWD1-225ENST00000616944 MMP13P45452 471 aa15.44■□□□□ 0.06
CBWD1-225ENST00000616944 PLTPP55058 493 aa15.44■□□□□ 0.06
CBWD1-225ENST00000616944 BASP1P80723 227 aaKnown RBP15.44■□□□□ 0.06
CBWD1-225ENST00000616944 DMC1Q14565 340 aa15.44■□□□□ 0.06
CBWD1-225ENST00000616944 INO80DQ53TQ3 878 aaPredicted RBP15.44■□□□□ 0.06
CBWD1-225ENST00000616944 FAXCQ5TGI0 409 aa15.44■□□□□ 0.06
CBWD1-225ENST00000616944 ANKRD22Q5VYY1 191 aa15.44■□□□□ 0.06
CBWD1-225ENST00000616944 TMEM215Q68D42 235 aa15.44■□□□□ 0.06
CBWD1-225ENST00000616944 ITPRIPL1Q6GPH6 555 aa15.44■□□□□ 0.06
CBWD1-225ENST00000616944 LEKR1Q6ZMV7 388 aa15.44■□□□□ 0.06
CBWD1-225ENST00000616944 PCGF5Q86SE9 256 aa15.44■□□□□ 0.06
CBWD1-225ENST00000616944 ADIPOR2Q86V24 386 aa15.44■□□□□ 0.06
CBWD1-225ENST00000616944 PPIL6Q8IXY8 311 aa15.44■□□□□ 0.06
CBWD1-225ENST00000616944 YAF2Q8IY57 180 aa15.44■□□□□ 0.06
CBWD1-225ENST00000616944 TAB3Q8N5C8 712 aaPredicted RBP15.44■□□□□ 0.06
CBWD1-225ENST00000616944 NAT16Q8N8M0 369 aa15.44■□□□□ 0.06
CBWD1-225ENST00000616944 AENQ8WTP8 325 aaKnown RBP15.44■□□□□ 0.06
CBWD1-225ENST00000616944 PSKH2Q96QS6 385 aa15.44■□□□□ 0.06
CBWD1-225ENST00000616944 XPO6Q96QU8 1125 aaKnown RBP15.44■□□□□ 0.06
CBWD1-225ENST00000616944 UBA2Q9UBT2 640 aaPredicted RBP15.44■□□□□ 0.06
CBWD1-225ENST00000616944 TCF20Q9UGU0 1960 aaKnown RBP15.43■□□□□ 0.06
CBWD1-225ENST00000616944 TCRBV7S3A2A0A539 114 aa15.43■□□□□ 0.06
CBWD1-225ENST00000616944 MUSKO15146 869 aa15.43■□□□□ 0.06
CBWD1-225ENST00000616944 CAV1Q03135 178 aa15.43■□□□□ 0.06
CBWD1-225ENST00000616944 MESP2Q0VG99 397 aa15.43■□□□□ 0.06
CBWD1-225ENST00000616944 HLTFQ14527 1009 aaKnown RBP eCLIP15.43■□□□□ 0.06
CBWD1-225ENST00000616944 BRD3Q15059 726 aa15.43■□□□□ 0.06
CBWD1-225ENST00000616944 GEN1Q17RS7 908 aa15.43■□□□□ 0.06
CBWD1-225ENST00000616944 KCTD11Q693B1 232 aa15.43■□□□□ 0.06
CBWD1-225ENST00000616944 LINGO4Q6UY18 593 aa15.43■□□□□ 0.06
CBWD1-225ENST00000616944 AHI1Q8N157 1196 aa15.43■□□□□ 0.06
CBWD1-225ENST00000616944 PHTF2Q8N3S3 785 aa15.43■□□□□ 0.06
CBWD1-225ENST00000616944 NSMCE1Q8WV22 266 aa15.43■□□□□ 0.06
CBWD1-225ENST00000616944 FCRL5Q96RD9 977 aa15.43■□□□□ 0.06
CBWD1-225ENST00000616944 MGME1Q9BQP7 344 aa15.43■□□□□ 0.06
CBWD1-225ENST00000616944 GLOD4Q9HC38 313 aa15.43■□□□□ 0.06
CBWD1-225ENST00000616944 DNAJC17Q9NVM6 304 aaKnown RBP15.43■□□□□ 0.06
CBWD1-225ENST00000616944 RSPH14Q9UHP6 348 aa15.43■□□□□ 0.06
CBWD1-225ENST00000616944 ANAPC5Q9UJX4 755 aa15.43■□□□□ 0.06
CBWD1-225ENST00000616944 SMAPO00193 183 aa15.43■□□□□ 0.06
CBWD1-225ENST00000616944 NDC80O14777 642 aa15.43■□□□□ 0.06
CBWD1-225ENST00000616944 MT-CO1P00395 513 aa15.43■□□□□ 0.06
CBWD1-225ENST00000616944 TPSB2P20231 275 aa15.43■□□□□ 0.06
CBWD1-225ENST00000616944 GJA4P35212 333 aa15.43■□□□□ 0.06
CBWD1-225ENST00000616944 OPRD1P41143 372 aa15.43■□□□□ 0.06
CBWD1-225ENST00000616944 DGKGP49619 791 aa15.43■□□□□ 0.06
CBWD1-225ENST00000616944 SERPINH1P50454 418 aaKnown RBP15.43■□□□□ 0.06
CBWD1-225ENST00000616944 CYTH1Q15438 398 aa15.43■□□□□ 0.06
CBWD1-225ENST00000616944 TPSAB1Q15661 275 aa15.43■□□□□ 0.06
CBWD1-225ENST00000616944 FBXO38Q6PIJ6 1188 aa15.43■□□□□ 0.06
CBWD1-225ENST00000616944 PLCD3Q8N3E9 789 aa15.43■□□□□ 0.06
CBWD1-225ENST00000616944 HNRNPLLQ8WVV9 542 aaKnown RBP15.43■□□□□ 0.06
CBWD1-225ENST00000616944 ANKRD7Q92527 254 aa15.43■□□□□ 0.06
CBWD1-225ENST00000616944 EXOC4Q96A65 974 aa15.43■□□□□ 0.06
CBWD1-225ENST00000616944 TTC17Q96AE7 1141 aa15.43■□□□□ 0.06
CBWD1-225ENST00000616944 OXNAD1Q96HP4 312 aaPredicted RBP15.43■□□□□ 0.06
CBWD1-225ENST00000616944 FMO2Q99518 471 aa15.43■□□□□ 0.06
CBWD1-225ENST00000616944 MLPHQ9BV36 600 aaPredicted RBP15.43■□□□□ 0.06
CBWD1-225ENST00000616944 NT5MQ9NPB1 228 aa15.43■□□□□ 0.06
CBWD1-225ENST00000616944 EIF2B3Q9NR50 452 aaKnown RBP15.43■□□□□ 0.06
CBWD1-225ENST00000616944 SEPT3Q9UH03 358 aa15.43■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms