RNA–Protein interactions for RNA: ENST00000611598.1

PCDHGB1-202, Transcript of protocadherin gamma subfamily B, 1, humanhuman

APPRIS ALT2 BASIC

Gene PCDHGB1, Length 2,592 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB1-202ENST00000611598 TSPAN14Q8NG11 270 aa15.36■□□□□ 0.05
PCDHGB1-202ENST00000611598 OMDQ99983 421 aa15.36■□□□□ 0.05
PCDHGB1-202ENST00000611598 CASS4Q9NQ75 786 aa15.36■□□□□ 0.05
PCDHGB1-202ENST00000611598 BCAP29Q9UHQ4 241 aa15.36■□□□□ 0.05
PCDHGB1-202ENST00000611598 GJA3Q9Y6H8 435 aa15.36■□□□□ 0.05
PCDHGB1-202ENST00000611598 XPO1O14980 1071 aaKnown RBP15.35■□□□□ 0.05
PCDHGB1-202ENST00000611598 MAGEB3O15480 346 aa15.35■□□□□ 0.05
PCDHGB1-202ENST00000611598 TIMM44O43615 452 aa15.35■□□□□ 0.05
PCDHGB1-202ENST00000611598 DLX3O60479 287 aa15.35■□□□□ 0.05
PCDHGB1-202ENST00000611598 HDCP19113 662 aa15.35■□□□□ 0.05
PCDHGB1-202ENST00000611598 DPYSQ14117 519 aa15.35■□□□□ 0.05
PCDHGB1-202ENST00000611598 CENPLQ8N0S6 344 aaPredicted RBP15.35■□□□□ 0.05
PCDHGB1-202ENST00000611598 CCNYL1Q8N7R7 359 aa15.35■□□□□ 0.05
PCDHGB1-202ENST00000611598 SLC2A14Q8TDB8 520 aa15.35■□□□□ 0.05
PCDHGB1-202ENST00000611598 APBA2Q99767 749 aa15.35■□□□□ 0.05
PCDHGB1-202ENST00000611598 CCT7Q99832 543 aa15.35■□□□□ 0.05
PCDHGB1-202ENST00000611598 IL22Q9GZX6 179 aa15.35■□□□□ 0.05
PCDHGB1-202ENST00000611598 RCOR3Q9P2K3 495 aaPredicted RBP15.35■□□□□ 0.05
PCDHGB1-202ENST00000611598 TLK1Q9UKI8 766 aa15.35■□□□□ 0.05
PCDHGB1-202ENST00000611598 RUVBL2Q9Y230 463 aaKnown RBP15.35■□□□□ 0.05
PCDHGB1-202ENST00000611598 MCM3APO60318 1980 aa15.35■□□□□ 0.05
PCDHGB1-202ENST00000611598 C9IYK1 514 aa15.35■□□□□ 0.05
PCDHGB1-202ENST00000611598 E7ENX8 843 aa15.35■□□□□ 0.05
PCDHGB1-202ENST00000611598 DCLK1O15075 740 aa15.35■□□□□ 0.05
PCDHGB1-202ENST00000611598 SLC35E2BP0CK96 405 aa15.35■□□□□ 0.05
PCDHGB1-202ENST00000611598 TKTP29401 623 aaKnown RBP15.35■□□□□ 0.05
PCDHGB1-202ENST00000611598 CSRP3P50461 194 aa15.35■□□□□ 0.05
PCDHGB1-202ENST00000611598 ADIGQ0VDE8 80 aa15.35■□□□□ 0.05
PCDHGB1-202ENST00000611598 RALGDSQ12967 914 aa15.35■□□□□ 0.05
PCDHGB1-202ENST00000611598 USP10Q14694 798 aaKnown RBP15.35■□□□□ 0.05
PCDHGB1-202ENST00000611598 HERC3Q15034 1050 aa15.35■□□□□ 0.05
PCDHGB1-202ENST00000611598 ANO4Q32M45 955 aa15.35■□□□□ 0.05
PCDHGB1-202ENST00000611598 SLC41A1Q8IVJ1 513 aa15.35■□□□□ 0.05
PCDHGB1-202ENST00000611598 MYO1HQ8N1T3 1032 aa15.35■□□□□ 0.05
PCDHGB1-202ENST00000611598 SNX31Q8N9S9 440 aa15.35■□□□□ 0.05
PCDHGB1-202ENST00000611598 GPR22Q99680 433 aa15.35■□□□□ 0.05
PCDHGB1-202ENST00000611598 TIMMDC1Q9NPL8 285 aa15.35■□□□□ 0.05
PCDHGB1-202ENST00000611598 XPR1Q9UBH6 696 aa15.35■□□□□ 0.05
PCDHGB1-202ENST00000611598 FIS1Q9Y3D6 152 aa15.35■□□□□ 0.05
PCDHGB1-202ENST00000611598 PCDHGA7Q9Y5G6 932 aa15.35■□□□□ 0.05
PCDHGB1-202ENST00000611598 EEF2KO00418 725 aaKnown RBP15.34■□□□□ 0.05
PCDHGB1-202ENST00000611598 TRIM38O00635 465 aa15.34■□□□□ 0.05
PCDHGB1-202ENST00000611598 SLC22A2O15244 555 aa15.34■□□□□ 0.05
PCDHGB1-202ENST00000611598 CABYRO75952 493 aa15.34■□□□□ 0.05
PCDHGB1-202ENST00000611598 RPL10P27635 214 aaKnown RBP15.34■□□□□ 0.05
PCDHGB1-202ENST00000611598 GABRB3P28472 473 aa15.34■□□□□ 0.05
PCDHGB1-202ENST00000611598 CSE1LP55060 971 aaKnown RBP15.34■□□□□ 0.05
PCDHGB1-202ENST00000611598 ADARP55265 1226 aaKnown RBP15.34■□□□□ 0.05
PCDHGB1-202ENST00000611598 COG7P83436 770 aa15.34■□□□□ 0.05
PCDHGB1-202ENST00000611598 ZBTB17Q13105 803 aa15.34■□□□□ 0.05
PCDHGB1-202ENST00000611598 RFTN1Q14699 578 aaPredicted RBP15.34■□□□□ 0.05
PCDHGB1-202ENST00000611598 PAFAH1B3Q15102 231 aaKnown RBP15.34■□□□□ 0.05
PCDHGB1-202ENST00000611598 DGKDQ16760 1214 aa15.34■□□□□ 0.05
PCDHGB1-202ENST00000611598 TSTD2Q5T7W7 516 aa15.34■□□□□ 0.05
PCDHGB1-202ENST00000611598 SYPL2Q5VXT5 272 aa15.34■□□□□ 0.05
PCDHGB1-202ENST00000611598 KCTD11Q693B1 232 aa15.34■□□□□ 0.05
PCDHGB1-202ENST00000611598 ZC3HC1Q86WB0 502 aaKnown RBP15.34■□□□□ 0.05
PCDHGB1-202ENST00000611598 NPWQ8N729 165 aa15.34■□□□□ 0.05
PCDHGB1-202ENST00000611598 KDM1BQ8NB78 822 aa15.34■□□□□ 0.05
PCDHGB1-202ENST00000611598 RNF169Q8NCN4 708 aa15.34■□□□□ 0.05
PCDHGB1-202ENST00000611598 HMGCLL1Q8TB92 370 aa15.34■□□□□ 0.05
PCDHGB1-202ENST00000611598 STYXQ8WUJ0 223 aa15.34■□□□□ 0.05
PCDHGB1-202ENST00000611598 ABTB1Q969K4 478 aaPredicted RBP15.34■□□□□ 0.05
PCDHGB1-202ENST00000611598 SLC29A1Q99808 456 aa15.34■□□□□ 0.05
PCDHGB1-202ENST00000611598 ANLNQ9NQW6 1124 aa15.34■□□□□ 0.05
PCDHGB1-202ENST00000611598 SETD4Q9NVD3 440 aa15.34■□□□□ 0.05
PCDHGB1-202ENST00000611598 SNTG2Q9NY99 539 aa15.34■□□□□ 0.05
PCDHGB1-202ENST00000611598 ARHGEF37A1IGU5 675 aa15.34■□□□□ 0.05
PCDHGB1-202ENST00000611598 TARM1B6A8C7 271 aa15.34■□□□□ 0.05
PCDHGB1-202ENST00000611598 M0QYT0 321 aa15.34■□□□□ 0.05
PCDHGB1-202ENST00000611598 PLOD2O00469 737 aa15.34■□□□□ 0.05
PCDHGB1-202ENST00000611598 TXNP10599 105 aaKnown RBP15.34■□□□□ 0.05
PCDHGB1-202ENST00000611598 PPIDQ08752 370 aaKnown RBP15.34■□□□□ 0.05
PCDHGB1-202ENST00000611598 DCTN2Q13561 401 aaKnown RBP15.34■□□□□ 0.05
PCDHGB1-202ENST00000611598 IKBKEQ14164 716 aa15.34■□□□□ 0.05
PCDHGB1-202ENST00000611598 MTX3Q5HYI7 312 aa15.34■□□□□ 0.05
PCDHGB1-202ENST00000611598 CNTD1Q8N815 330 aa15.34■□□□□ 0.05
PCDHGB1-202ENST00000611598 ZNF597Q96LX8 424 aa15.34■□□□□ 0.05
PCDHGB1-202ENST00000611598 FAM210AQ96ND0 272 aa15.34■□□□□ 0.05
PCDHGB1-202ENST00000611598 FAM124BQ9H5Z6 455 aaPredicted RBP15.34■□□□□ 0.05
PCDHGB1-202ENST00000611598 CAAP1Q9H8G2 361 aa15.34■□□□□ 0.05
PCDHGB1-202ENST00000611598 PIGVQ9NUD9 493 aa15.34■□□□□ 0.05
PCDHGB1-202ENST00000611598 CHCHD3Q9NX63 227 aaKnown RBP15.34■□□□□ 0.05
PCDHGB1-202ENST00000611598 RSL24D1Q9UHA3 163 aaKnown RBP15.34■□□□□ 0.05
PCDHGB1-202ENST00000611598 AP4S1Q9Y587 144 aa15.34■□□□□ 0.05
PCDHGB1-202ENST00000611598 GTF3C5Q9Y5Q8 519 aaPredicted RBP15.34■□□□□ 0.05
PCDHGB1-202ENST00000611598 I6L893 689 aaPredicted RBP15.33■□□□□ 0.05
PCDHGB1-202ENST00000611598 SDHDO14521 159 aa15.33■□□□□ 0.05
PCDHGB1-202ENST00000611598 DDHD2O94830 711 aa15.33■□□□□ 0.05
PCDHGB1-202ENST00000611598 CYP2C8P10632 490 aa15.33■□□□□ 0.05
PCDHGB1-202ENST00000611598 ZNF23P17027 643 aa15.33■□□□□ 0.05
PCDHGB1-202ENST00000611598 ERCC2P18074 760 aa15.33■□□□□ 0.05
PCDHGB1-202ENST00000611598 CYP2B6P20813 491 aa15.33■□□□□ 0.05
PCDHGB1-202ENST00000611598 EPHX2P34913 555 aa15.33■□□□□ 0.05
PCDHGB1-202ENST00000611598 NDUFV1P49821 464 aa15.33■□□□□ 0.05
PCDHGB1-202ENST00000611598 PSME3P61289 254 aa15.33■□□□□ 0.05
PCDHGB1-202ENST00000611598 TMED1Q13445 227 aa15.33■□□□□ 0.05
PCDHGB1-202ENST00000611598 LRRC8EQ6NSJ5 796 aa15.33■□□□□ 0.05
PCDHGB1-202ENST00000611598 DUS1LQ6P1R4 473 aaKnown RBP15.33■□□□□ 0.05
PCDHGB1-202ENST00000611598 CYP2R1Q6VVX0 501 aa15.33■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms