RNA–Protein interactions for RNA: ENST00000608720.5

CTCFL-219, Transcript of CCCTC-binding factor like, humanhuman

TSL 1 (best)

Gene CTCFL, Length 2,241 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-219ENST00000608720 SCAPQ12770 1279 aa14.9□□□□□ -0.02
CTCFL-219ENST00000608720 ZFP1Q6P2D0 407 aa14.9□□□□□ -0.02
CTCFL-219ENST00000608720 TOP6BLQ8N6T0 577 aa14.9□□□□□ -0.02
CTCFL-219ENST00000608720 RSPH1Q8WYR4 309 aa14.9□□□□□ -0.02
CTCFL-219ENST00000608720 VAT1Q99536 393 aa14.9□□□□□ -0.02
CTCFL-219ENST00000608720 Q9H521 79 aa14.9□□□□□ -0.02
CTCFL-219ENST00000608720 IARS2Q9NSE4 1012 aaKnown RBP14.9□□□□□ -0.02
CTCFL-219ENST00000608720 INPP5FQ9Y2H2 1132 aa14.9□□□□□ -0.02
CTCFL-219ENST00000608720 FAM72CH0Y354 149 aa14.9□□□□□ -0.02
CTCFL-219ENST00000608720 VILLO15195 856 aa14.9□□□□□ -0.02
CTCFL-219ENST00000608720 DENRO43583 198 aaKnown RBP14.9□□□□□ -0.02
CTCFL-219ENST00000608720 MPSTP25325 297 aa14.9□□□□□ -0.02
CTCFL-219ENST00000608720 DNAJB1P25685 340 aa14.9□□□□□ -0.02
CTCFL-219ENST00000608720 DNAJB2P25686 324 aa14.9□□□□□ -0.02
CTCFL-219ENST00000608720 AXLP30530 894 aa14.9□□□□□ -0.02
CTCFL-219ENST00000608720 CD68P34810 354 aaPredicted RBP14.9□□□□□ -0.02
CTCFL-219ENST00000608720 GRIA4P48058 902 aa14.9□□□□□ -0.02
CTCFL-219ENST00000608720 PHEXP78562 749 aa14.9□□□□□ -0.02
CTCFL-219ENST00000608720 PRKAA1Q13131 559 aa14.9□□□□□ -0.02
CTCFL-219ENST00000608720 SEMA3BQ13214 749 aa14.9□□□□□ -0.02
CTCFL-219ENST00000608720 LSM12Q3MHD2 195 aaKnown RBP14.9□□□□□ -0.02
CTCFL-219ENST00000608720 FAM72AQ5TYM5 149 aa14.9□□□□□ -0.02
CTCFL-219ENST00000608720 FAM72DQ6L9T8 149 aa14.9□□□□□ -0.02
CTCFL-219ENST00000608720 BORAQ6PGQ7 559 aa14.9□□□□□ -0.02
CTCFL-219ENST00000608720 UGT2A3Q6UWM9 527 aa14.9□□□□□ -0.02
CTCFL-219ENST00000608720 SATL1Q86VE3 508 aa14.9□□□□□ -0.02
CTCFL-219ENST00000608720 OSTM1Q86WC4 334 aa14.9□□□□□ -0.02
CTCFL-219ENST00000608720 FAM72BQ86X60 149 aa14.9□□□□□ -0.02
CTCFL-219ENST00000608720 SNX32Q86XE0 403 aa14.9□□□□□ -0.02
CTCFL-219ENST00000608720 DSELQ8IZU8 1212 aa14.9□□□□□ -0.02
CTCFL-219ENST00000608720 AGR3Q8TD06 166 aa14.9□□□□□ -0.02
CTCFL-219ENST00000608720 GPR22Q99680 433 aa14.9□□□□□ -0.02
CTCFL-219ENST00000608720 SLX1AQ9BQ83 275 aa14.9□□□□□ -0.02
CTCFL-219ENST00000608720 MLPHQ9BV36 600 aaPredicted RBP14.9□□□□□ -0.02
CTCFL-219ENST00000608720 FAM49AQ9H0Q0 323 aaPredicted RBP14.9□□□□□ -0.02
CTCFL-219ENST00000608720 TASP1Q9H6P5 420 aa14.9□□□□□ -0.02
CTCFL-219ENST00000608720 WDR55Q9H6Y2 383 aaPredicted RBP14.9□□□□□ -0.02
CTCFL-219ENST00000608720 SLC39A10Q9ULF5 831 aa14.9□□□□□ -0.02
CTCFL-219ENST00000608720 SH3GLB1Q9Y371 365 aa14.9□□□□□ -0.02
CTCFL-219ENST00000608720 CITO14578 2027 aa14.9□□□□□ -0.02
CTCFL-219ENST00000608720 NRCAMQ92823 1304 aa14.89□□□□□ -0.03
CTCFL-219ENST00000608720 GOLGA8QA0A0J9YX86 632 aa14.89□□□□□ -0.03
CTCFL-219ENST00000608720 GOLGA8OA6NCC3 632 aa14.89□□□□□ -0.03
CTCFL-219ENST00000608720 GOLGA8NF8WBI6 632 aa14.89□□□□□ -0.03
CTCFL-219ENST00000608720 TXNDC9O14530 226 aa14.89□□□□□ -0.03
CTCFL-219ENST00000608720 FBXO21O94952 628 aa14.89□□□□□ -0.03
CTCFL-219ENST00000608720 PTPN1P18031 435 aaKnown RBP14.89□□□□□ -0.03
CTCFL-219ENST00000608720 TFEBP19484 476 aa14.89□□□□□ -0.03
CTCFL-219ENST00000608720 CSRP3P50461 194 aa14.89□□□□□ -0.03
CTCFL-219ENST00000608720 ADARP55265 1226 aaKnown RBP14.89□□□□□ -0.03
CTCFL-219ENST00000608720 HERC3Q15034 1050 aa14.89□□□□□ -0.03
CTCFL-219ENST00000608720 XKR4Q5GH76 650 aa14.89□□□□□ -0.03
CTCFL-219ENST00000608720 BNC2Q6ZN30 1099 aaPredicted RBP14.89□□□□□ -0.03
CTCFL-219ENST00000608720 CATSPER1Q8NEC5 780 aa14.89□□□□□ -0.03
CTCFL-219ENST00000608720 HDAC11Q96DB2 347 aa14.89□□□□□ -0.03
CTCFL-219ENST00000608720 ZFRQ96KR1 1074 aaKnown RBP14.89□□□□□ -0.03
CTCFL-219ENST00000608720 CDHR5Q9HBB8 845 aa14.89□□□□□ -0.03
CTCFL-219ENST00000608720 CHRAC1Q9NRG0 131 aa14.89□□□□□ -0.03
CTCFL-219ENST00000608720 RHBDL2Q9NX52 303 aa14.89□□□□□ -0.03
CTCFL-219ENST00000608720 CDKN2AIPQ9NXV6 580 aaPredicted RBP14.89□□□□□ -0.03
CTCFL-219ENST00000608720 FBXW11Q9UKB1 542 aa14.89□□□□□ -0.03
CTCFL-219ENST00000608720 CLDN5O00501 218 aa14.89□□□□□ -0.03
CTCFL-219ENST00000608720 PSMD3O43242 534 aa14.89□□□□□ -0.03
CTCFL-219ENST00000608720 GRID2O43424 1007 aa14.89□□□□□ -0.03
CTCFL-219ENST00000608720 BEST1O76090 585 aa14.89□□□□□ -0.03
CTCFL-219ENST00000608720 DDHD2O94830 711 aa14.89□□□□□ -0.03
CTCFL-219ENST00000608720 CHRNGP07510 517 aa14.89□□□□□ -0.03
CTCFL-219ENST00000608720 HOXD8P13378 290 aaPredicted RBP14.89□□□□□ -0.03
CTCFL-219ENST00000608720 DARSP14868 501 aaKnown RBP14.89□□□□□ -0.03
CTCFL-219ENST00000608720 PPARGP37231 505 aaPredicted RBP14.89□□□□□ -0.03
CTCFL-219ENST00000608720 ABCG1P45844 678 aa14.89□□□□□ -0.03
CTCFL-219ENST00000608720 TKTL1P51854 596 aa14.89□□□□□ -0.03
CTCFL-219ENST00000608720 SNAPC2Q13487 334 aa14.89□□□□□ -0.03
CTCFL-219ENST00000608720 DCTN2Q13561 401 aaKnown RBP14.89□□□□□ -0.03
CTCFL-219ENST00000608720 PRPSAP1Q14558 356 aa14.89□□□□□ -0.03
CTCFL-219ENST00000608720 ARL13AQ5H913 290 aaPredicted RBP14.89□□□□□ -0.03
CTCFL-219ENST00000608720 RARS2Q5T160 578 aaKnown RBP14.89□□□□□ -0.03
CTCFL-219ENST00000608720 TMEM151AQ8N4L1 468 aa14.89□□□□□ -0.03
CTCFL-219ENST00000608720 MARVELD2Q8N4S9 558 aa14.89□□□□□ -0.03
CTCFL-219ENST00000608720 SMYD1Q8NB12 490 aa14.89□□□□□ -0.03
CTCFL-219ENST00000608720 NMD3Q96D46 503 aaKnown RBP14.89□□□□□ -0.03
CTCFL-219ENST00000608720 LRGUKQ96M69 825 aa14.89□□□□□ -0.03
CTCFL-219ENST00000608720 CDRT15Q96T59 188 aa14.89□□□□□ -0.03
CTCFL-219ENST00000608720 C1QTNF1Q9BXJ1 281 aa14.89□□□□□ -0.03
CTCFL-219ENST00000608720 RBM38Q9H0Z9 239 aaKnown RBP14.89□□□□□ -0.03
CTCFL-219ENST00000608720 RHOJQ9H4E5 214 aa14.89□□□□□ -0.03
CTCFL-219ENST00000608720 WDR6Q9NNW5 1121 aaKnown RBP14.89□□□□□ -0.03
CTCFL-219ENST00000608720 CLIC5Q9NZA1 410 aa14.89□□□□□ -0.03
CTCFL-219ENST00000608720 KLK14Q9P0G3 267 aa14.89□□□□□ -0.03
CTCFL-219ENST00000608720 PIGNO95427 931 aa14.88□□□□□ -0.03
CTCFL-219ENST00000608720 MMP3P08254 477 aa14.88□□□□□ -0.03
CTCFL-219ENST00000608720 F7P08709 466 aaPredicted RBP14.88□□□□□ -0.03
CTCFL-219ENST00000608720 SMIM18P0DKX4 95 aa14.88□□□□□ -0.03
CTCFL-219ENST00000608720 COL6A2P12110 1019 aa14.88□□□□□ -0.03
CTCFL-219ENST00000608720 ZNF135P52742 658 aaPredicted RBP14.88□□□□□ -0.03
CTCFL-219ENST00000608720 LILRA4P59901 499 aa14.88□□□□□ -0.03
CTCFL-219ENST00000608720 GALNT2Q10471 571 aa14.88□□□□□ -0.03
CTCFL-219ENST00000608720 CDH17Q12864 832 aa14.88□□□□□ -0.03
CTCFL-219ENST00000608720 TMED1Q13445 227 aa14.88□□□□□ -0.03
CTCFL-219ENST00000608720 USP10Q14694 798 aaKnown RBP14.88□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms