RNA–Protein interactions for RNA: ENST00000601656.5

FARP1-235, Transcript of FERM, ARH/RhoGEF and pleckstrin domain protein 1, humanhuman

TSL 5

Gene FARP1, Length 806 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FARP1-235ENST00000601656 ZMYM2Q9UBW7 1377 aa9.63□□□□□ -0.87
FARP1-235ENST00000601656 PRAMEF25A6NGN4 478 aa9.63□□□□□ -0.87
FARP1-235ENST00000601656 I3L4J1 428 aa9.63□□□□□ -0.87
FARP1-235ENST00000601656 PTGESO14684 152 aa9.63□□□□□ -0.87
FARP1-235ENST00000601656 ARHGAP6O43182 974 aa9.63□□□□□ -0.87
FARP1-235ENST00000601656 SGTAO43765 313 aa9.63□□□□□ -0.87
FARP1-235ENST00000601656 NEMFO60524 1076 aa9.63□□□□□ -0.87
FARP1-235ENST00000601656 APBB3O95704 486 aa9.63□□□□□ -0.87
FARP1-235ENST00000601656 ENGP17813 658 aa9.63□□□□□ -0.87
FARP1-235ENST00000601656 TUBP50607 506 aa9.63□□□□□ -0.87
FARP1-235ENST00000601656 DCAF7P61962 342 aa9.63□□□□□ -0.87
FARP1-235ENST00000601656 PSMC5P62195 406 aa9.63□□□□□ -0.87
FARP1-235ENST00000601656 ADCY2Q08462 1091 aa9.63□□□□□ -0.87
FARP1-235ENST00000601656 PTPAQ15257 358 aa9.63□□□□□ -0.87
FARP1-235ENST00000601656 NAB2Q15742 525 aa9.63□□□□□ -0.87
FARP1-235ENST00000601656 ITPRIPL2Q3MIP1 535 aa9.63□□□□□ -0.87
FARP1-235ENST00000601656 USP39Q53GS9 565 aaKnown RBP9.63□□□□□ -0.87
FARP1-235ENST00000601656 TMEM196Q5HYL7 178 aa9.63□□□□□ -0.87
FARP1-235ENST00000601656 SLC8B1Q6J4K2 584 aa9.63□□□□□ -0.87
FARP1-235ENST00000601656 BEND5Q7L4P6 421 aa9.63□□□□□ -0.87
FARP1-235ENST00000601656 PNPLA5Q7Z6Z6 429 aaPredicted RBP9.63□□□□□ -0.87
FARP1-235ENST00000601656 MOGAT3Q86VF5 341 aa9.63□□□□□ -0.87
FARP1-235ENST00000601656 CILP2Q8IUL8 1156 aa9.63□□□□□ -0.87
FARP1-235ENST00000601656 HDDC3Q8N4P3 179 aa9.63□□□□□ -0.87
FARP1-235ENST00000601656 LEMD2Q8NC56 503 aa9.63□□□□□ -0.87
FARP1-235ENST00000601656 SHKBP1Q8TBC3 707 aa9.63□□□□□ -0.87
FARP1-235ENST00000601656 PLEKHO2Q8TD55 490 aa9.63□□□□□ -0.87
FARP1-235ENST00000601656 MAELQ96JY0 434 aaKnown RBP9.63□□□□□ -0.87
FARP1-235ENST00000601656 PYM1Q9BRP8 204 aaKnown RBP9.63□□□□□ -0.87
FARP1-235ENST00000601656 CXCL16Q9H2A7 254 aa9.63□□□□□ -0.87
FARP1-235ENST00000601656 SERHLQ9NQF3 203 aa9.63□□□□□ -0.87
FARP1-235ENST00000601656 OLA1Q9NTK5 396 aaKnown RBP9.63□□□□□ -0.87
FARP1-235ENST00000601656 CPNE7Q9UBL6 633 aa9.63□□□□□ -0.87
FARP1-235ENST00000601656 GULP1Q9UBP9 304 aa9.63□□□□□ -0.87
FARP1-235ENST00000601656 MKL2Q9ULH7 1088 aa9.63□□□□□ -0.87
FARP1-235ENST00000601656 ASB1Q9Y576 335 aa9.63□□□□□ -0.87
FARP1-235ENST00000601656 PTPRBP23467 1997 aa9.63□□□□□ -0.87
FARP1-235ENST00000601656 A0A1B0GUA9 196 aa9.62□□□□□ -0.87
FARP1-235ENST00000601656 F8W735 103 aaPredicted RBP9.62□□□□□ -0.87
FARP1-235ENST00000601656 GOLGA6L22H0YM25 854 aa9.62□□□□□ -0.87
FARP1-235ENST00000601656 PIK3R2O00459 728 aa9.62□□□□□ -0.87
FARP1-235ENST00000601656 TRIM38O00635 465 aa9.62□□□□□ -0.87
FARP1-235ENST00000601656 B4GALT5O43286 388 aa9.62□□□□□ -0.87
FARP1-235ENST00000601656 TRAPPC3O43617 180 aa9.62□□□□□ -0.87
FARP1-235ENST00000601656 TIPRLO75663 272 aa9.62□□□□□ -0.87
FARP1-235ENST00000601656 B3GAT3O94766 335 aa9.62□□□□□ -0.87
FARP1-235ENST00000601656 BAG4O95429 457 aaKnown RBP9.62□□□□□ -0.87
FARP1-235ENST00000601656 EGFP01133 1207 aa9.62□□□□□ -0.87
FARP1-235ENST00000601656 U2AF2P26368 475 aaKnown RBP eCLIP9.62□□□□□ -0.87
FARP1-235ENST00000601656 KRT20P35900 424 aa9.62□□□□□ -0.87
FARP1-235ENST00000601656 STAT5AP42229 794 aa9.62□□□□□ -0.87
FARP1-235ENST00000601656 BRCC3P46736 316 aa9.62□□□□□ -0.87
FARP1-235ENST00000601656 SUMO3P55854 103 aaPredicted RBP9.62□□□□□ -0.87
FARP1-235ENST00000601656 MBTD1Q05BQ5 628 aa9.62□□□□□ -0.87
FARP1-235ENST00000601656 MGAT2Q10469 447 aa9.62□□□□□ -0.87
FARP1-235ENST00000601656 TWF1Q12792 350 aa9.62□□□□□ -0.87
FARP1-235ENST00000601656 EMC4Q5J8M3 183 aa9.62□□□□□ -0.87
FARP1-235ENST00000601656 HLA-DQA1Q5Y7H0 255 aa9.62□□□□□ -0.87
FARP1-235ENST00000601656 SYT13Q7L8C5 426 aa9.62□□□□□ -0.87
FARP1-235ENST00000601656 PNPLA1Q8N8W4 532 aa9.62□□□□□ -0.87
FARP1-235ENST00000601656 TMEM52Q8NDY8 209 aa9.62□□□□□ -0.87
FARP1-235ENST00000601656 ERCC4Q92889 916 aaPredicted RBP9.62□□□□□ -0.87
FARP1-235ENST00000601656 GBP4Q96PP9 640 aa9.62□□□□□ -0.87
FARP1-235ENST00000601656 MTMR9Q96QG7 549 aa9.62□□□□□ -0.87
FARP1-235ENST00000601656 ZC3H7BQ9UGR2 993 aaKnown RBP9.62□□□□□ -0.87
FARP1-235ENST00000601656 MBD1Q9UIS9 605 aaPredicted RBP9.62□□□□□ -0.87
FARP1-235ENST00000601656 ITGB1BP2Q9UKP3 347 aa9.62□□□□□ -0.87
FARP1-235ENST00000601656 PCDHA13Q9Y5I0 950 aa9.62□□□□□ -0.87
FARP1-235ENST00000601656 HECTD1Q9ULT8 2610 aa9.62□□□□□ -0.87
FARP1-235ENST00000601656 NUP210Q8TEM1 1887 aaPredicted RBP9.62□□□□□ -0.87
FARP1-235ENST00000601656 ZNF462Q96JM2 2506 aa9.61□□□□□ -0.87
FARP1-235ENST00000601656 TCHHQ07283 1943 aa9.61□□□□□ -0.87
FARP1-235ENST00000601656 FAM171A2A8MVW0 826 aa9.61□□□□□ -0.87
FARP1-235ENST00000601656 TMEM189-UBE2V1I3L0A0 370 aa9.61□□□□□ -0.87
FARP1-235ENST00000601656 J3QKU1 62 aa9.61□□□□□ -0.87
FARP1-235ENST00000601656 TRDMT1O14717 391 aaKnown RBP9.61□□□□□ -0.87
FARP1-235ENST00000601656 PRLP01236 227 aa9.61□□□□□ -0.87
FARP1-235ENST00000601656 FUCA1P04066 466 aa9.61□□□□□ -0.87
FARP1-235ENST00000601656 PRKCBP05771 671 aa9.61□□□□□ -0.87
FARP1-235ENST00000601656 MMEP08473 750 aa9.61□□□□□ -0.87
FARP1-235ENST00000601656 TYRP14679 529 aa9.61□□□□□ -0.87
FARP1-235ENST00000601656 HNRNPLP14866 589 aaKnown RBP eCLIP9.61□□□□□ -0.87
FARP1-235ENST00000601656 BCKDHBP21953 392 aa9.61□□□□□ -0.87
FARP1-235ENST00000601656 GJB2P29033 226 aa9.61□□□□□ -0.87
FARP1-235ENST00000601656 QARSP47897 775 aaKnown RBP9.61□□□□□ -0.87
FARP1-235ENST00000601656 MAN2A2P49641 1150 aa9.61□□□□□ -0.87
FARP1-235ENST00000601656 CLCNKBP51801 687 aa9.61□□□□□ -0.87
FARP1-235ENST00000601656 ATXN3P54252 364 aaPredicted RBP9.61□□□□□ -0.87
FARP1-235ENST00000601656 ORC2Q13416 577 aaPredicted RBP9.61□□□□□ -0.87
FARP1-235ENST00000601656 HNRNPDQ14103 355 aaKnown RBP9.61□□□□□ -0.87
FARP1-235ENST00000601656 TFDP1Q14186 410 aa9.61□□□□□ -0.87
FARP1-235ENST00000601656 DMC1Q14565 340 aa9.61□□□□□ -0.87
FARP1-235ENST00000601656 MXD4Q14582 209 aaPredicted RBP9.61□□□□□ -0.87
FARP1-235ENST00000601656 EMC2Q15006 297 aa9.61□□□□□ -0.87
FARP1-235ENST00000601656 CALCRLQ16602 461 aa9.61□□□□□ -0.87
FARP1-235ENST00000601656 STXBP5Q5T5C0 1151 aa9.61□□□□□ -0.87
FARP1-235ENST00000601656 PRAMEF9Q5VWM5 478 aa9.61□□□□□ -0.87
FARP1-235ENST00000601656 TPGS2Q68CL5 300 aa9.61□□□□□ -0.87
FARP1-235ENST00000601656 NCAPH2Q6IBW4 605 aa9.61□□□□□ -0.87
FARP1-235ENST00000601656 CD300LGQ6UXG3 332 aa9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms