RNA–Protein interactions for RNA: ENST00000598969.5

COPE-208, Transcript of coatomer protein complex subunit epsilon, human

TSL 5

Gene COPE, Length 1,770 nt, Biotype processed transcript, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
COPE-208	ENST00000598969	GGA2	Q9UJY4	613 aa		21.32	■■□□□ 1
COPE-208	ENST00000598969	TPX2	Q9ULW0	747 aa	Known RBP	21.32	■■□□□ 1
COPE-208	ENST00000598969	ACTL7A	Q9Y615	435 aa		21.32	■■□□□ 1
COPE-208	ENST00000598969	UNC80	Q8N2C7	3258 aa		21.32	■■□□□ 1
COPE-208	ENST00000598969		A0A0A0MRY4	1105 aa		21.31	■■□□□ 1
COPE-208	ENST00000598969	DNALI1	O14645	258 aa	Predicted RBP	21.31	■■□□□ 1
COPE-208	ENST00000598969	CCNB1	P14635	433 aa		21.31	■■□□□ 1
COPE-208	ENST00000598969	ARF5	P84085	180 aa		21.31	■■□□□ 1
COPE-208	ENST00000598969	PUS10	Q3MIT2	529 aa	Known RBP	21.31	■■□□□ 1
COPE-208	ENST00000598969	FUT11	Q495W5	492 aa		21.31	■■□□□ 1
COPE-208	ENST00000598969	TEX44	Q53QW1	395 aa		21.31	■■□□□ 1
COPE-208	ENST00000598969	SPDYC	Q5MJ68	293 aa		21.31	■■□□□ 1
COPE-208	ENST00000598969	ANKRD20A2	Q5SQ80	823 aa		21.31	■■□□□ 1
COPE-208	ENST00000598969	ANKRD20A1	Q5TYW2	823 aa		21.31	■■□□□ 1
COPE-208	ENST00000598969	ANKRD20A3	Q5VUR7	823 aa		21.31	■■□□□ 1
COPE-208	ENST00000598969	CNTD1	Q8N815	330 aa		21.31	■■□□□ 1
COPE-208	ENST00000598969	USP33	Q8TEY7	942 aa		21.31	■■□□□ 1
COPE-208	ENST00000598969	SPATA13	Q96N96	652 aa		21.31	■■□□□ 1
COPE-208	ENST00000598969	XPO6	Q96QU8	1125 aa	Known RBP	21.31	■■□□□ 1
COPE-208	ENST00000598969	DNAJC17	Q9NVM6	304 aa	Known RBP	21.31	■■□□□ 1
COPE-208	ENST00000598969	VPS51	Q9UID3	782 aa		21.31	■■□□□ 1
COPE-208	ENST00000598969	GOLGA6B	A6NDN3	693 aa		21.31	■■□□□ 1
COPE-208	ENST00000598969	CBX4	O00257	560 aa		21.31	■■□□□ 1
COPE-208	ENST00000598969	PPFIA2	O75334	1257 aa		21.31	■■□□□ 1
COPE-208	ENST00000598969	TULP3	O75386	442 aa		21.31	■■□□□ 1
COPE-208	ENST00000598969	CD160	O95971	181 aa		21.31	■■□□□ 1
COPE-208	ENST00000598969	PABPC1	P11940	636 aa	Known RBP	21.31	■■□□□ 1
COPE-208	ENST00000598969	SLC6A11	P48066	632 aa		21.31	■■□□□ 1
COPE-208	ENST00000598969	NR1H3	Q13133	447 aa		21.31	■■□□□ 1
COPE-208	ENST00000598969	PITRM1	Q5JRX3	1037 aa		21.31	■■□□□ 1
COPE-208	ENST00000598969	CFAP58	Q5T655	872 aa		21.31	■■□□□ 1
COPE-208	ENST00000598969	C4orf22	Q6V702	233 aa		21.31	■■□□□ 1
COPE-208	ENST00000598969	CEP128	Q6ZU80	1094 aa		21.31	■■□□□ 1
COPE-208	ENST00000598969	TSEN2	Q8NCE0	465 aa	Known RBP	21.31	■■□□□ 1
COPE-208	ENST00000598969	CHFR	Q96EP1	664 aa		21.31	■■□□□ 1
COPE-208	ENST00000598969	FOXP3	Q9BZS1	431 aa		21.31	■■□□□ 1
COPE-208	ENST00000598969	BRD9	Q9H8M2	597 aa		21.31	■■□□□ 1
COPE-208	ENST00000598969	OGFR	Q9NZT2	677 aa		21.31	■■□□□ 1
COPE-208	ENST00000598969	GJA4	P35212	333 aa		21.3	■■□□□ 1
COPE-208	ENST00000598969	SLC10A7	Q0GE19	358 aa		21.3	■■□□□ 1
COPE-208	ENST00000598969	HNRNPD	Q14103	355 aa	Known RBP	21.3	■■□□□ 1
COPE-208	ENST00000598969	MORF4L2	Q15014	288 aa		21.3	■■□□□ 1
COPE-208	ENST00000598969	HIBCH	Q6NVY1	386 aa	Predicted RBP	21.3	■■□□□ 1
COPE-208	ENST00000598969	SLC44A3	Q8N4M1	653 aa		21.3	■■□□□ 1
COPE-208	ENST00000598969	TEX26	Q8N6G2	289 aa		21.3	■■□□□ 1
COPE-208	ENST00000598969	NXPE3	Q969Y0	559 aa		21.3	■■□□□ 1
COPE-208	ENST00000598969	ZNF599	Q96NL3	588 aa		21.3	■■□□□ 1
COPE-208	ENST00000598969	RUFY1	Q96T51	708 aa		21.3	■■□□□ 1
COPE-208	ENST00000598969	VAT1	Q99536	393 aa		21.3	■■□□□ 1
COPE-208	ENST00000598969	PAK5	Q9P286	719 aa		21.3	■■□□□ 1
COPE-208	ENST00000598969	ATP8A1	Q9Y2Q0	1164 aa		21.3	■■□□□ 1
COPE-208	ENST00000598969	STK10	O94804	968 aa	Known RBP	21.29	■■□□□ 1
COPE-208	ENST00000598969	CD68	P34810	354 aa	Predicted RBP	21.29	■■□□□ 1
COPE-208	ENST00000598969	DGKG	P49619	791 aa		21.29	■■□□□ 1
COPE-208	ENST00000598969	MESP2	Q0VG99	397 aa		21.29	■■□□□ 1
COPE-208	ENST00000598969	GEN1	Q17RS7	908 aa		21.29	■■□□□ 1
COPE-208	ENST00000598969	ITPRIPL2	Q3MIP1	535 aa		21.29	■■□□□ 1
COPE-208	ENST00000598969	TMCO4	Q5TGY1	634 aa		21.29	■■□□□ 1
COPE-208	ENST00000598969	NAIF1	Q69YI7	327 aa	Predicted RBP	21.29	■■□□□ 1
COPE-208	ENST00000598969	ADIPOR2	Q86V24	386 aa		21.29	■■□□□ 1
COPE-208	ENST00000598969	TEKT5	Q96M29	485 aa		21.29	■■□□□ 1
COPE-208	ENST00000598969	C2orf49	Q9BVC5	232 aa	Predicted RBP	21.29	■■□□□ 1
COPE-208	ENST00000598969	RBM22	Q9NW64	420 aa	Known RBP eCLIP	21.29	■■□□□ 1
COPE-208	ENST00000598969	FAM53C	Q9NYF3	392 aa		21.29	■■□□□ 1
COPE-208	ENST00000598969	KLHL8	Q9P2G9	620 aa	Predicted RBP	21.29	■■□□□ 1
COPE-208	ENST00000598969	SLC27A6	Q9Y2P4	619 aa		21.29	■■□□□ 1
COPE-208	ENST00000598969	SMAP	O00193	183 aa		21.28	■■□□□ 1
COPE-208	ENST00000598969	TP73	O15350	636 aa		21.28	■■□□□ 1
COPE-208	ENST00000598969	ZBTB24	O43167	697 aa	Predicted RBP	21.28	■■□□□ 1
COPE-208	ENST00000598969	OPHN1	O60890	802 aa		21.28	■■□□□ 1
COPE-208	ENST00000598969	METTL18	O95568	372 aa		21.28	■■□□□ 1
COPE-208	ENST00000598969	OPRD1	P41143	372 aa		21.28	■■□□□ 1
COPE-208	ENST00000598969	RENBP	P51606	427 aa		21.28	■■□□□ 1
COPE-208	ENST00000598969	PMS2	P54278	862 aa		21.28	■■□□□ 1
COPE-208	ENST00000598969	LBR	Q14739	615 aa	Known RBP	21.28	■■□□□ 1
COPE-208	ENST00000598969	HSP90B2P	Q58FF3	399 aa		21.28	■■□□□ 1
COPE-208	ENST00000598969	TMEM215	Q68D42	235 aa		21.28	■■□□□ 1
COPE-208	ENST00000598969	LINGO4	Q6UY18	593 aa		21.28	■■□□□ 1
COPE-208	ENST00000598969	PID1	Q7Z2X4	250 aa		21.28	■■□□□ 1
COPE-208	ENST00000598969	TAB3	Q8N5C8	712 aa	Predicted RBP	21.28	■■□□□ 1
COPE-208	ENST00000598969	UBLCP1	Q8WVY7	318 aa	Predicted RBP	21.28	■■□□□ 1
COPE-208	ENST00000598969	ACD	Q96AP0	544 aa		21.28	■■□□□ 1
COPE-208	ENST00000598969	AGAP3	Q96P47	875 aa		21.28	■■□□□ 1
COPE-208	ENST00000598969	IGSF9	Q9P2J2	1179 aa		21.28	■■□□□ 1
COPE-208	ENST00000598969	UBA2	Q9UBT2	640 aa	Predicted RBP	21.28	■■□□□ 1
COPE-208	ENST00000598969	TRHDE	Q9UKU6	1024 aa		21.28	■■□□□ 1
COPE-208	ENST00000598969	FAM50B	Q9Y247	325 aa		21.28	■■□□□ 1
COPE-208	ENST00000598969	HLA-DQB2	P05538	268 aa		21.28	■■□□□ 1
COPE-208	ENST00000598969	ASGR2	P07307	311 aa		21.28	■■□□□ 1
COPE-208	ENST00000598969	HSD17B3	P37058	310 aa		21.28	■■□□□ 1
COPE-208	ENST00000598969	DMC1	Q14565	340 aa		21.28	■■□□□ 1
COPE-208	ENST00000598969	MARC1	Q5VT66	337 aa		21.28	■■□□□ 1
COPE-208	ENST00000598969	PPIL6	Q8IXY8	311 aa		21.28	■■□□□ 1
COPE-208	ENST00000598969	KRT222	Q8N1A0	295 aa		21.28	■■□□□ 1
COPE-208	ENST00000598969	PHTF2	Q8N3S3	785 aa		21.28	■■□□□ 1
COPE-208	ENST00000598969	TXLNGY	Q9BZA5	131 aa		21.28	■■□□□ 1
COPE-208	ENST00000598969	SHOC2	Q9UQ13	582 aa		21.28	■■□□□ 1
COPE-208	ENST00000598969	TRBV21OR9-2	A0A075B6F4	123 aa	Predicted RBP	21.27	■■□□□ 1
COPE-208	ENST00000598969	LOC730098	B7Z3J9	87 aa		21.27	■■□□□ 1
COPE-208	ENST00000598969	MT-CO1	P00395	513 aa		21.27	■■□□□ 1

Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms