RNA–Protein interactions for RNA: ENST00000592927.5

DDX39A-219, Transcript of DExD-box helicase 39A, humanhuman

TSL 3

Gene DDX39A, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-219ENST00000592927 H0Y626 953 aa12.17□□□□□ -0.46
DDX39A-219ENST00000592927 H3BRJ5 948 aa12.17□□□□□ -0.46
DDX39A-219ENST00000592927 APOC4-APOC2K7ER74 178 aa12.17□□□□□ -0.46
DDX39A-219ENST00000592927 DAPK3O43293 454 aa12.17□□□□□ -0.46
DDX39A-219ENST00000592927 LUC7L3O95232 432 aaKnown RBP12.17□□□□□ -0.46
DDX39A-219ENST00000592927 APOC2P02655 101 aa12.17□□□□□ -0.46
DDX39A-219ENST00000592927 APODP05090 189 aa12.17□□□□□ -0.46
DDX39A-219ENST00000592927 CD48P09326 243 aa12.17□□□□□ -0.46
DDX39A-219ENST00000592927 RHOXF2BP0C7M4 288 aa12.17□□□□□ -0.46
DDX39A-219ENST00000592927 KRT10P13645 584 aa12.17□□□□□ -0.46
DDX39A-219ENST00000592927 TGM2P21980 687 aa12.17□□□□□ -0.46
DDX39A-219ENST00000592927 EPHB2P29323 1055 aa12.17□□□□□ -0.46
DDX39A-219ENST00000592927 COILP38432 576 aaPredicted RBP12.17□□□□□ -0.46
DDX39A-219ENST00000592927 HCAR3P49019 387 aa12.17□□□□□ -0.46
DDX39A-219ENST00000592927 DGKGP49619 791 aa12.17□□□□□ -0.46
DDX39A-219ENST00000592927 IRAK1P51617 712 aa12.17□□□□□ -0.46
DDX39A-219ENST00000592927 CDH4P55283 916 aa12.17□□□□□ -0.46
DDX39A-219ENST00000592927 TPI1P60174 286 aa12.17□□□□□ -0.46
DDX39A-219ENST00000592927 KDSRQ06136 332 aa12.17□□□□□ -0.46
DDX39A-219ENST00000592927 GRSF1Q12849 480 aaKnown RBP eCLIP12.17□□□□□ -0.46
DDX39A-219ENST00000592927 PON2Q15165 354 aa12.17□□□□□ -0.46
DDX39A-219ENST00000592927 CA9Q16790 459 aa12.17□□□□□ -0.46
DDX39A-219ENST00000592927 ALFQ53S48 1182 aa12.17□□□□□ -0.46
DDX39A-219ENST00000592927 ANKRD20A8PQ5CZ79 823 aa12.17□□□□□ -0.46
DDX39A-219ENST00000592927 MANEALQ5VSG8 457 aa12.17□□□□□ -0.46
DDX39A-219ENST00000592927 NAIF1Q69YI7 327 aaPredicted RBP12.17□□□□□ -0.46
DDX39A-219ENST00000592927 CCDC137Q6PK04 289 aaKnown RBP12.17□□□□□ -0.46
DDX39A-219ENST00000592927 NUDT18Q6ZVK8 323 aa12.17□□□□□ -0.46
DDX39A-219ENST00000592927 SYDE1Q6ZW31 735 aaPredicted RBP12.17□□□□□ -0.46
DDX39A-219ENST00000592927 CHST9Q7L1S5 443 aa12.17□□□□□ -0.46
DDX39A-219ENST00000592927 ANKS1BQ7Z6G8 1248 aa12.17□□□□□ -0.46
DDX39A-219ENST00000592927 ADAT2Q7Z6V5 191 aaKnown RBP12.17□□□□□ -0.46
DDX39A-219ENST00000592927 RFX6Q8HWS3 928 aa12.17□□□□□ -0.46
DDX39A-219ENST00000592927 FIBINQ8TAL6 211 aa12.17□□□□□ -0.46
DDX39A-219ENST00000592927 GAB3Q8WWW8 586 aa12.17□□□□□ -0.46
DDX39A-219ENST00000592927 KCTD15Q96SI1 283 aaPredicted RBP12.17□□□□□ -0.46
DDX39A-219ENST00000592927 RHOXF2Q9BQY4 288 aa12.17□□□□□ -0.46
DDX39A-219ENST00000592927 HERPUD2Q9BSE4 406 aa12.17□□□□□ -0.46
DDX39A-219ENST00000592927 ANKZF1Q9H8Y5 726 aa12.17□□□□□ -0.46
DDX39A-219ENST00000592927 ARHGEF4Q9NR80 690 aa12.17□□□□□ -0.46
DDX39A-219ENST00000592927 ARGLU1Q9NWB6 273 aaPredicted RBP12.17□□□□□ -0.46
DDX39A-219ENST00000592927 MPP6Q9NZW5 540 aa12.17□□□□□ -0.46
DDX39A-219ENST00000592927 FBXO10Q9UK96 956 aa12.17□□□□□ -0.46
DDX39A-219ENST00000592927 RAB21Q9UL25 225 aa12.17□□□□□ -0.46
DDX39A-219ENST00000592927 TICRRQ7Z2Z1 1910 aa12.16□□□□□ -0.46
DDX39A-219ENST00000592927 TBC1D3BA6NDS4 549 aa12.16□□□□□ -0.46
DDX39A-219ENST00000592927 EEF2KO00418 725 aaKnown RBP12.16□□□□□ -0.46
DDX39A-219ENST00000592927 APOL1O14791 398 aa12.16□□□□□ -0.46
DDX39A-219ENST00000592927 RAD51CO43502 376 aa12.16□□□□□ -0.46
DDX39A-219ENST00000592927 CST8O60676 142 aa12.16□□□□□ -0.46
DDX39A-219ENST00000592927 RPP40O75818 363 aaKnown RBP12.16□□□□□ -0.46
DDX39A-219ENST00000592927 CNTN5O94779 1100 aa12.16□□□□□ -0.46
DDX39A-219ENST00000592927 KAT7O95251 611 aa12.16□□□□□ -0.46
DDX39A-219ENST00000592927 CAPNS1P04632 268 aa12.16□□□□□ -0.46
DDX39A-219ENST00000592927 CISD3P0C7P0 127 aa12.16□□□□□ -0.46
DDX39A-219ENST00000592927 RHOQP17081 205 aa12.16□□□□□ -0.46
DDX39A-219ENST00000592927 CSRP1P21291 193 aaKnown RBP12.16□□□□□ -0.46
DDX39A-219ENST00000592927 DRD1P21728 446 aa12.16□□□□□ -0.46
DDX39A-219ENST00000592927 IL4RP24394 825 aa12.16□□□□□ -0.46
DDX39A-219ENST00000592927 TNFRSF8P28908 595 aa12.16□□□□□ -0.46
DDX39A-219ENST00000592927 HOXA6P31267 233 aa12.16□□□□□ -0.46
DDX39A-219ENST00000592927 GRIA2P42262 883 aa12.16□□□□□ -0.46
DDX39A-219ENST00000592927 PXNP49023 591 aaPredicted RBP12.16□□□□□ -0.46
DDX39A-219ENST00000592927 NR2C2P49116 596 aa12.16□□□□□ -0.46
DDX39A-219ENST00000592927 OXCT1P55809 520 aa12.16□□□□□ -0.46
DDX39A-219ENST00000592927 DR1Q01658 176 aa12.16□□□□□ -0.46
DDX39A-219ENST00000592927 SEMA3BQ13214 749 aa12.16□□□□□ -0.46
DDX39A-219ENST00000592927 NAA30Q147X3 362 aaPredicted RBP12.16□□□□□ -0.46
DDX39A-219ENST00000592927 TMEM196Q5HYL7 178 aa12.16□□□□□ -0.46
DDX39A-219ENST00000592927 SLC9A4Q6AI14 798 aa12.16□□□□□ -0.46
DDX39A-219ENST00000592927 Q6ZS52 159 aa12.16□□□□□ -0.46
DDX39A-219ENST00000592927 TFAP2DQ7Z6R9 452 aa12.16□□□□□ -0.46
DDX39A-219ENST00000592927 ATL2Q8NHH9 583 aa12.16□□□□□ -0.46
DDX39A-219ENST00000592927 PARD6BQ9BYG5 372 aa12.16□□□□□ -0.46
DDX39A-219ENST00000592927 RAB17Q9H0T7 212 aa12.16□□□□□ -0.46
DDX39A-219ENST00000592927 RETREG1Q9H6L5 497 aa12.16□□□□□ -0.46
DDX39A-219ENST00000592927 CATSPERBQ9H7T0 1116 aa12.16□□□□□ -0.46
DDX39A-219ENST00000592927 FBRSL1Q9HCM7 1045 aaKnown RBP12.16□□□□□ -0.46
DDX39A-219ENST00000592927 CACNA2D2Q9NY47 1150 aa12.16□□□□□ -0.46
DDX39A-219ENST00000592927 KIAA1522Q9P206 1035 aaPredicted RBP12.16□□□□□ -0.46
DDX39A-219ENST00000592927 AMACRQ9UHK6 382 aa12.16□□□□□ -0.46
DDX39A-219ENST00000592927 CLEC4EQ9ULY5 219 aa12.16□□□□□ -0.46
DDX39A-219ENST00000592927 DRG1Q9Y295 367 aaKnown RBP12.16□□□□□ -0.46
DDX39A-219ENST00000592927 RALGAPA1Q6GYQ0 2036 aa12.16□□□□□ -0.46
DDX39A-219ENST00000592927 HELZ2Q9BYK8 2649 aaKnown RBP12.16□□□□□ -0.46
DDX39A-219ENST00000592927 BPTFQ12830 3046 aa12.16□□□□□ -0.46
DDX39A-219ENST00000592927 COL4A2P08572 1712 aa12.15□□□□□ -0.46
DDX39A-219ENST00000592927 TRIM24O15164 1050 aa12.15□□□□□ -0.46
DDX39A-219ENST00000592927 FGF10O15520 208 aaPredicted RBP12.15□□□□□ -0.46
DDX39A-219ENST00000592927 LIASO43766 372 aa12.15□□□□□ -0.46
DDX39A-219ENST00000592927 ZNF189O75820 626 aaPredicted RBP12.15□□□□□ -0.46
DDX39A-219ENST00000592927 HEXIM1O94992 359 aaKnown RBP12.15□□□□□ -0.46
DDX39A-219ENST00000592927 ECEL1O95672 775 aa12.15□□□□□ -0.46
DDX39A-219ENST00000592927 GOT1P17174 413 aa12.15□□□□□ -0.46
DDX39A-219ENST00000592927 OR1E1P30953 314 aa12.15□□□□□ -0.46
DDX39A-219ENST00000592927 ADCY2Q08462 1091 aa12.15□□□□□ -0.46
DDX39A-219ENST00000592927 LRRC32Q14392 662 aa12.15□□□□□ -0.46
DDX39A-219ENST00000592927 BRD3Q15059 726 aa12.15□□□□□ -0.46
DDX39A-219ENST00000592927 LLGL1Q15334 1064 aa12.15□□□□□ -0.46
DDX39A-219ENST00000592927 ARTNQ5T4W7 220 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms