RNA–Protein interactions for RNA: ENST00000590485.1

SAFB-208, Transcript of scaffold attachment factor B, human

TSL 3

Gene SAFB, Length 548 nt, Biotype retained intron, Subcellular localisation Exosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SAFB-208	ENST00000590485	ELOVL1	Q9BW60	279 aa		4.94	□□□□□ -1.62
SAFB-208	ENST00000590485	NUDC	Q9Y266	331 aa		4.94	□□□□□ -1.62
SAFB-208	ENST00000590485	ABCC4	O15439	1325 aa		4.94	□□□□□ -1.62
SAFB-208	ENST00000590485	MANSC4	A6NHS7	340 aa	Predicted RBP	4.93	□□□□□ -1.62
SAFB-208	ENST00000590485		E7EVH7	732 aa		4.93	□□□□□ -1.62
SAFB-208	ENST00000590485	PSMD14	O00487	310 aa		4.93	□□□□□ -1.62
SAFB-208	ENST00000590485	RPS12	P25398	132 aa	Known RBP	4.93	□□□□□ -1.62
SAFB-208	ENST00000590485	AGTR2	P50052	363 aa		4.93	□□□□□ -1.62
SAFB-208	ENST00000590485	PAPOLA	P51003	745 aa	Known RBP	4.93	□□□□□ -1.62
SAFB-208	ENST00000590485	FAM3B	P58499	235 aa	Predicted RBP	4.93	□□□□□ -1.62
SAFB-208	ENST00000590485	KPNB1	Q14974	876 aa	Known RBP	4.93	□□□□□ -1.62
SAFB-208	ENST00000590485	AWAT1	Q58HT5	328 aa		4.93	□□□□□ -1.62
SAFB-208	ENST00000590485	FBXO46	Q6PJ61	603 aa	Predicted RBP	4.93	□□□□□ -1.62
SAFB-208	ENST00000590485	ZNF788	Q6ZQV5	615 aa		4.93	□□□□□ -1.62
SAFB-208	ENST00000590485	MOGAT3	Q86VF5	341 aa		4.93	□□□□□ -1.62
SAFB-208	ENST00000590485	PRIMA1	Q86XR5	153 aa		4.93	□□□□□ -1.62
SAFB-208	ENST00000590485	LAS2	Q8IYD9	372 aa		4.93	□□□□□ -1.62
SAFB-208	ENST00000590485	SPPL3	Q8TCT6	385 aa		4.93	□□□□□ -1.62
SAFB-208	ENST00000590485	AFG1L	Q8WV93	481 aa		4.93	□□□□□ -1.62
SAFB-208	ENST00000590485	ASB12	Q8WXK4	309 aa		4.93	□□□□□ -1.62
SAFB-208	ENST00000590485	ZNF764	Q96H86	408 aa	Predicted RBP	4.93	□□□□□ -1.62
SAFB-208	ENST00000590485	NUAK2	Q9H093	628 aa		4.93	□□□□□ -1.62
SAFB-208	ENST00000590485	SLITRK6	Q9H5Y7	841 aa		4.93	□□□□□ -1.62
SAFB-208	ENST00000590485	PRDM16	Q9HAZ2	1276 aa		4.93	□□□□□ -1.62
SAFB-208	ENST00000590485	G6PC2	Q9NQR9	355 aa		4.93	□□□□□ -1.62
SAFB-208	ENST00000590485	ITM2C	Q9NQX7	267 aa		4.93	□□□□□ -1.62
SAFB-208	ENST00000590485	MIS18A	Q9NYP9	233 aa		4.93	□□□□□ -1.62
SAFB-208	ENST00000590485	SEMA5B	Q9P283	1151 aa		4.93	□□□□□ -1.62
SAFB-208	ENST00000590485	SLC12A4	Q9UP95	1085 aa		4.93	□□□□□ -1.62
SAFB-208	ENST00000590485	HEMK1	Q9Y5R4	338 aa	Predicted RBP	4.93	□□□□□ -1.62
SAFB-208	ENST00000590485	COX11	Q9Y6N1	276 aa		4.93	□□□□□ -1.62
SAFB-208	ENST00000590485	AOX1	Q06278	1338 aa		4.93	□□□□□ -1.62
SAFB-208	ENST00000590485	CLSPN	Q9HAW4	1339 aa		4.93	□□□□□ -1.62
SAFB-208	ENST00000590485	POLR2A	P24928	1970 aa	Known RBP	4.93	□□□□□ -1.62
SAFB-208	ENST00000590485	LAMB4	A4D0S4	1761 aa		4.92	□□□□□ -1.62
SAFB-208	ENST00000590485	TISP43	B9A030	160 aa		4.92	□□□□□ -1.62
SAFB-208	ENST00000590485	PRRT4	C9JH25	899 aa		4.92	□□□□□ -1.62
SAFB-208	ENST00000590485	PRY	O14603	147 aa		4.92	□□□□□ -1.62
SAFB-208	ENST00000590485	CREB3	O43889	395 aa		4.92	□□□□□ -1.62
SAFB-208	ENST00000590485	PPFIA2	O75334	1257 aa		4.92	□□□□□ -1.62
SAFB-208	ENST00000590485	FAM155B	O75949	473 aa		4.92	□□□□□ -1.62
SAFB-208	ENST00000590485	KRT38	O76015	456 aa		4.92	□□□□□ -1.62
SAFB-208	ENST00000590485	TK1	P04183	234 aa		4.92	□□□□□ -1.62
SAFB-208	ENST00000590485	PRKCG	P05129	697 aa		4.92	□□□□□ -1.62
SAFB-208	ENST00000590485	CYP3A4	P08684	503 aa		4.92	□□□□□ -1.62
SAFB-208	ENST00000590485	NHLRC4	P0CG21	123 aa	Predicted RBP	4.92	□□□□□ -1.62
SAFB-208	ENST00000590485	CYP2D6	P10635	497 aa		4.92	□□□□□ -1.62
SAFB-208	ENST00000590485	CYP2A6	P11509	494 aa	Predicted RBP	4.92	□□□□□ -1.62
SAFB-208	ENST00000590485	ATF7	P17544	494 aa	Predicted RBP	4.92	□□□□□ -1.62
SAFB-208	ENST00000590485	TACR3	P29371	465 aa		4.92	□□□□□ -1.62
SAFB-208	ENST00000590485	STAT6	P42226	847 aa		4.92	□□□□□ -1.62
SAFB-208	ENST00000590485	PCP4	P48539	62 aa		4.92	□□□□□ -1.62
SAFB-208	ENST00000590485	RBM5	P52756	815 aa	Known RBP eCLIP	4.92	□□□□□ -1.62
SAFB-208	ENST00000590485	PROK1	P58294	105 aa		4.92	□□□□□ -1.62
SAFB-208	ENST00000590485	ACTR2	P61160	394 aa		4.92	□□□□□ -1.62
SAFB-208	ENST00000590485	FKBP1B	P68106	108 aa		4.92	□□□□□ -1.62
SAFB-208	ENST00000590485	NHLH1	Q02575	133 aa		4.92	□□□□□ -1.62
SAFB-208	ENST00000590485	GRAP	Q13588	217 aa		4.92	□□□□□ -1.62
SAFB-208	ENST00000590485	CUL4B	Q13620	913 aa		4.92	□□□□□ -1.62
SAFB-208	ENST00000590485	SMN1	Q16637	294 aa	Known RBP	4.92	□□□□□ -1.62
SAFB-208	ENST00000590485	TMEM95	Q3KNT9	176 aa		4.92	□□□□□ -1.62
SAFB-208	ENST00000590485	TMEM88	Q6PEY1	159 aa		4.92	□□□□□ -1.62
SAFB-208	ENST00000590485	SYNE3	Q6ZMZ3	975 aa		4.92	□□□□□ -1.62
SAFB-208	ENST00000590485	FTSJ3	Q8IY81	847 aa	Known RBP	4.92	□□□□□ -1.62
SAFB-208	ENST00000590485	SEMA6D	Q8NFY4	1073 aa		4.92	□□□□□ -1.62
SAFB-208	ENST00000590485	GRAPL	Q8TC17	118 aa	Predicted RBP	4.92	□□□□□ -1.62
SAFB-208	ENST00000590485	SDCCAG3	Q96C92	435 aa		4.92	□□□□□ -1.62
SAFB-208	ENST00000590485	CDCA5	Q96FF9	252 aa		4.92	□□□□□ -1.62
SAFB-208	ENST00000590485	TRMT61A	Q96FX7	289 aa	Known RBP	4.92	□□□□□ -1.62
SAFB-208	ENST00000590485	PIGS	Q96S52	555 aa		4.92	□□□□□ -1.62
SAFB-208	ENST00000590485	HTATIP2	Q9BUP3	242 aa		4.92	□□□□□ -1.62
SAFB-208	ENST00000590485	DBNDD1	Q9H9R9	158 aa		4.92	□□□□□ -1.62
SAFB-208	ENST00000590485	C11orf21	Q9P2W6	132 aa		4.92	□□□□□ -1.62
SAFB-208	ENST00000590485	KCND3	Q9UK17	655 aa		4.92	□□□□□ -1.62
SAFB-208	ENST00000590485	GPR52	Q9Y2T5	361 aa		4.92	□□□□□ -1.62
SAFB-208	ENST00000590485	AGAP5	A6NIR3	686 aa		4.91	□□□□□ -1.62
SAFB-208	ENST00000590485	HNRNPR	O43390	633 aa	Known RBP	4.91	□□□□□ -1.62
SAFB-208	ENST00000590485	ECE2	O60344	883 aa		4.91	□□□□□ -1.62
SAFB-208	ENST00000590485	TFRC	P02786	760 aa	Known RBP	4.91	□□□□□ -1.62
SAFB-208	ENST00000590485	HOXD12	P35452	270 aa		4.91	□□□□□ -1.62
SAFB-208	ENST00000590485	RCAN1	P53805	252 aa		4.91	□□□□□ -1.62
SAFB-208	ENST00000590485	TFF2	Q03403	129 aa		4.91	□□□□□ -1.62
SAFB-208	ENST00000590485	GAB1	Q13480	694 aa		4.91	□□□□□ -1.62
SAFB-208	ENST00000590485	ZNF268	Q14587	947 aa	Predicted RBP	4.91	□□□□□ -1.62
SAFB-208	ENST00000590485	TAF12	Q16514	161 aa		4.91	□□□□□ -1.62
SAFB-208	ENST00000590485	HSP90AB4P	Q58FF6	505 aa		4.91	□□□□□ -1.62
SAFB-208	ENST00000590485	HSP90AB3P	Q58FF7	597 aa		4.91	□□□□□ -1.62
SAFB-208	ENST00000590485	SLC39A5	Q6ZMH5	540 aa		4.91	□□□□□ -1.62
SAFB-208	ENST00000590485	SYT13	Q7L8C5	426 aa		4.91	□□□□□ -1.62
SAFB-208	ENST00000590485	UEVLD	Q8IX04	471 aa		4.91	□□□□□ -1.62
SAFB-208	ENST00000590485	FSIP1	Q8NA03	581 aa		4.91	□□□□□ -1.62
SAFB-208	ENST00000590485	OSR1	Q8TAX0	266 aa	Predicted RBP	4.91	□□□□□ -1.62
SAFB-208	ENST00000590485	SLC2A12	Q8TD20	617 aa		4.91	□□□□□ -1.62
SAFB-208	ENST00000590485	CSGALNACT1	Q8TDX6	532 aa		4.91	□□□□□ -1.62
SAFB-208	ENST00000590485	ZNF845	Q96IR2	970 aa	Predicted RBP	4.91	□□□□□ -1.62
SAFB-208	ENST00000590485	EYA3	Q99504	573 aa		4.91	□□□□□ -1.62
SAFB-208	ENST00000590485	PYM1	Q9BRP8	204 aa	Known RBP	4.91	□□□□□ -1.62
SAFB-208	ENST00000590485	EFHD1	Q9BUP0	239 aa		4.91	□□□□□ -1.62
SAFB-208	ENST00000590485	GGA3	Q9NZ52	723 aa		4.91	□□□□□ -1.62
SAFB-208	ENST00000590485	TRMT112	Q9UI30	125 aa	Known RBP	4.91	□□□□□ -1.62

Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms