RNA–Protein interactions for RNA: ENST00000590098.1

PRKCSH-211, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 2

Gene PRKCSH, Length 795 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-211ENST00000590098 ZYG11BQ9C0D3 744 aa18.34■□□□□ 0.53
PRKCSH-211ENST00000590098 TNKS2Q9H2K2 1166 aa18.34■□□□□ 0.53
PRKCSH-211ENST00000590098 TMEM59LQ9UK28 342 aa18.34■□□□□ 0.53
PRKCSH-211ENST00000590098 CA5BQ9Y2D0 317 aa18.34■□□□□ 0.53
PRKCSH-211ENST00000590098 TDRD6O60522 2096 aaKnown RBP18.34■□□□□ 0.53
PRKCSH-211ENST00000590098 ENDOD1O94919 500 aa18.33■□□□□ 0.52
PRKCSH-211ENST00000590098 PCDH8O95206 1070 aa18.33■□□□□ 0.52
PRKCSH-211ENST00000590098 TPM2P07951 284 aa18.33■□□□□ 0.52
PRKCSH-211ENST00000590098 THEGLP0DJG4 465 aa18.33■□□□□ 0.52
PRKCSH-211ENST00000590098 PRLRP16471 622 aa18.33■□□□□ 0.52
PRKCSH-211ENST00000590098 CKMT2P17540 419 aa18.33■□□□□ 0.52
PRKCSH-211ENST00000590098 GLDCP23378 1020 aa18.33■□□□□ 0.52
PRKCSH-211ENST00000590098 AKT2P31751 481 aa18.33■□□□□ 0.52
PRKCSH-211ENST00000590098 CLDN6P56747 220 aa18.33■□□□□ 0.52
PRKCSH-211ENST00000590098 SLC20A2Q08357 652 aa18.33■□□□□ 0.52
PRKCSH-211ENST00000590098 TRNP1Q6NT89 227 aa18.33■□□□□ 0.52
PRKCSH-211ENST00000590098 ERN2Q76MJ5 926 aaKnown RBP18.33■□□□□ 0.52
PRKCSH-211ENST00000590098 ARCQ7LC44 396 aa18.33■□□□□ 0.52
PRKCSH-211ENST00000590098 ZNF677Q86XU0 584 aa18.33■□□□□ 0.52
PRKCSH-211ENST00000590098 GRIN3AQ8TCU5 1115 aa18.33■□□□□ 0.52
PRKCSH-211ENST00000590098 TSC1Q92574 1164 aa18.33■□□□□ 0.52
PRKCSH-211ENST00000590098 HDAC8Q9BY41 377 aa18.33■□□□□ 0.52
PRKCSH-211ENST00000590098 CEP44Q9C0F1 390 aa18.33■□□□□ 0.52
PRKCSH-211ENST00000590098 ATP13A1Q9HD20 1204 aa18.33■□□□□ 0.52
PRKCSH-211ENST00000590098 TAB2Q9NYJ8 693 aa18.33■□□□□ 0.52
PRKCSH-211ENST00000590098 TRPM6Q9BX84 2022 aa18.33■□□□□ 0.52
PRKCSH-211ENST00000590098 MYLKQ15746 1914 aa18.32■□□□□ 0.52
PRKCSH-211ENST00000590098 SDC3O75056 442 aa18.32■□□□□ 0.52
PRKCSH-211ENST00000590098 HNRNPA2B1P22626 353 aaKnown RBP18.32■□□□□ 0.52
PRKCSH-211ENST00000590098 DNA2P51530 1060 aa18.32■□□□□ 0.52
PRKCSH-211ENST00000590098 ATP11AP98196 1134 aa18.32■□□□□ 0.52
PRKCSH-211ENST00000590098 GNA12Q03113 381 aa18.32■□□□□ 0.52
PRKCSH-211ENST00000590098 ILKQ13418 452 aa18.32■□□□□ 0.52
PRKCSH-211ENST00000590098 ZNF284Q2VY69 593 aa18.32■□□□□ 0.52
PRKCSH-211ENST00000590098 ARL13BQ3SXY8 428 aa18.32■□□□□ 0.52
PRKCSH-211ENST00000590098 HS1BP3Q53T59 392 aa18.32■□□□□ 0.52
PRKCSH-211ENST00000590098 DPY19L3Q6ZPD9 716 aa18.32■□□□□ 0.52
PRKCSH-211ENST00000590098 KANSL1Q7Z3B3 1105 aa18.32■□□□□ 0.52
PRKCSH-211ENST00000590098 BNIPLQ7Z465 357 aa18.32■□□□□ 0.52
PRKCSH-211ENST00000590098 PCDH20Q8N6Y1 951 aaKnown RBP18.32■□□□□ 0.52
PRKCSH-211ENST00000590098 EMC1Q8N766 993 aa18.32■□□□□ 0.52
PRKCSH-211ENST00000590098 TMEM145Q8NBT3 493 aa18.32■□□□□ 0.52
PRKCSH-211ENST00000590098 NXPE2Q96DL1 559 aa18.32■□□□□ 0.52
PRKCSH-211ENST00000590098 SCUBE2Q9NQ36 999 aa18.32■□□□□ 0.52
PRKCSH-211ENST00000590098 METTL5Q9NRN9 209 aaKnown RBP18.32■□□□□ 0.52
PRKCSH-211ENST00000590098 PPARGC1AQ9UBK2 798 aaKnown RBP18.32■□□□□ 0.52
PRKCSH-211ENST00000590098 BAHCC1Q9P281 2608 aa18.32■□□□□ 0.52
PRKCSH-211ENST00000590098 LEFTY1O75610 366 aa18.31■□□□□ 0.52
PRKCSH-211ENST00000590098 GFPT2O94808 682 aa18.31■□□□□ 0.52
PRKCSH-211ENST00000590098 SERPINH1P50454 418 aaKnown RBP18.31■□□□□ 0.52
PRKCSH-211ENST00000590098 CDR2Q01850 454 aa18.31■□□□□ 0.52
PRKCSH-211ENST00000590098 FKBP15Q5T1M5 1219 aa18.31■□□□□ 0.52
PRKCSH-211ENST00000590098 PDZD3Q86UT5 571 aa18.31■□□□□ 0.52
PRKCSH-211ENST00000590098 DRC7Q8IY82 874 aa18.31■□□□□ 0.52
PRKCSH-211ENST00000590098 CALN1Q9BXU9 219 aa18.31■□□□□ 0.52
PRKCSH-211ENST00000590098 VPS16Q9H269 839 aa18.31■□□□□ 0.52
PRKCSH-211ENST00000590098 FZD3Q9NPG1 666 aa18.31■□□□□ 0.52
PRKCSH-211ENST00000590098 KLHL11Q9NVR0 708 aa18.31■□□□□ 0.52
PRKCSH-211ENST00000590098 ZNF212Q9UDV6 495 aa18.31■□□□□ 0.52
PRKCSH-211ENST00000590098 NOCTQ9UK39 431 aaKnown RBP18.31■□□□□ 0.52
PRKCSH-211ENST00000590098 RNF103O00237 685 aa18.3■□□□□ 0.52
PRKCSH-211ENST00000590098 ZMPSTE24O75844 475 aa18.3■□□□□ 0.52
PRKCSH-211ENST00000590098 MMP8P22894 467 aa18.3■□□□□ 0.52
PRKCSH-211ENST00000590098 SDC4P31431 198 aa18.3■□□□□ 0.52
PRKCSH-211ENST00000590098 ETFBP38117 255 aa18.3■□□□□ 0.52
PRKCSH-211ENST00000590098 NEK3P51956 506 aa18.3■□□□□ 0.52
PRKCSH-211ENST00000590098 POLR2FP61218 127 aaKnown RBP18.3■□□□□ 0.52
PRKCSH-211ENST00000590098 TARDBPQ13148 414 aaKnown RBP eCLIP18.3■□□□□ 0.52
PRKCSH-211ENST00000590098 ZNF211Q13398 564 aaPredicted RBP18.3■□□□□ 0.52
PRKCSH-211ENST00000590098 CDO1Q16878 200 aa18.3■□□□□ 0.52
PRKCSH-211ENST00000590098 CARD16Q5EG05 197 aa18.3■□□□□ 0.52
PRKCSH-211ENST00000590098 HES3Q5TGS1 186 aa18.3■□□□□ 0.52
PRKCSH-211ENST00000590098 RWDD4Q6NW29 188 aaKnown RBP18.3■□□□□ 0.52
PRKCSH-211ENST00000590098 FBXL19Q6PCT2 694 aa18.3■□□□□ 0.52
PRKCSH-211ENST00000590098 ENOX1Q8TC92 643 aaKnown RBP18.3■□□□□ 0.52
PRKCSH-211ENST00000590098 SLC20A1Q8WUM9 679 aa18.3■□□□□ 0.52
PRKCSH-211ENST00000590098 RXFP2Q8WXD0 754 aa18.3■□□□□ 0.52
PRKCSH-211ENST00000590098 HEPHQ9BQS7 1158 aa18.3■□□□□ 0.52
PRKCSH-211ENST00000590098 GANQ9H2C0 597 aa18.3■□□□□ 0.52
PRKCSH-211ENST00000590098 OR12D3Q9UGF7 316 aa18.3■□□□□ 0.52
PRKCSH-211ENST00000590098 AK5Q9Y6K8 562 aa18.3■□□□□ 0.52
PRKCSH-211ENST00000590098 SIGLEC6O43699 453 aa18.29■□□□□ 0.52
PRKCSH-211ENST00000590098 ZNF821O75541 412 aaPredicted RBP18.29■□□□□ 0.52
PRKCSH-211ENST00000590098 DGKAP23743 735 aa18.29■□□□□ 0.52
PRKCSH-211ENST00000590098 ITGB7P26010 798 aa18.29■□□□□ 0.52
PRKCSH-211ENST00000590098 ADRA1BP35368 520 aa18.29■□□□□ 0.52
PRKCSH-211ENST00000590098 CCNHP51946 323 aaPredicted RBP18.29■□□□□ 0.52
PRKCSH-211ENST00000590098 RPS21P63220 83 aaKnown RBP18.29■□□□□ 0.52
PRKCSH-211ENST00000590098 ARF5P84085 180 aa18.29■□□□□ 0.52
PRKCSH-211ENST00000590098 DAB2P98082 770 aa18.29■□□□□ 0.52
PRKCSH-211ENST00000590098 MAPK8IP2Q13387 824 aaPredicted RBP18.29■□□□□ 0.52
PRKCSH-211ENST00000590098 PROX2Q3B8N5 592 aa18.29■□□□□ 0.52
PRKCSH-211ENST00000590098 ARTNQ5T4W7 220 aa18.29■□□□□ 0.52
PRKCSH-211ENST00000590098 SEL1L3Q68CR1 1132 aa18.29■□□□□ 0.52
PRKCSH-211ENST00000590098 TRIM72Q6ZMU5 477 aa18.29■□□□□ 0.52
PRKCSH-211ENST00000590098 PHLDB2Q86SQ0 1253 aa18.29■□□□□ 0.52
PRKCSH-211ENST00000590098 SLC25A45Q8N413 288 aa18.29■□□□□ 0.52
PRKCSH-211ENST00000590098 OR13H1Q8NG92 308 aa18.29■□□□□ 0.52
PRKCSH-211ENST00000590098 FAM174AQ8TBP5 190 aa18.29■□□□□ 0.52
PRKCSH-211ENST00000590098 LRIG1Q96JA1 1093 aa18.29■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms