RNA–Protein interactions for RNA: ENST00000584760.1

SREBF1-223, Transcript of sterol regulatory element binding transcription factor 1, human

TSL 2

Gene SREBF1, Length 564 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SREBF1-223	ENST00000584760	ZNF653	Q96CK0	615 aa		13.61	□□□□□ -0.23
SREBF1-223	ENST00000584760	ORAI3	Q9BRQ5	295 aa		13.61	□□□□□ -0.23
SREBF1-223	ENST00000584760	ACE2	Q9BYF1	805 aa	Predicted RBP	13.61	□□□□□ -0.23
SREBF1-223	ENST00000584760	TRIM7	Q9C029	511 aa		13.61	□□□□□ -0.23
SREBF1-223	ENST00000584760	ISCU	Q9H1K1	167 aa		13.61	□□□□□ -0.23
SREBF1-223	ENST00000584760	ATP13A1	Q9HD20	1204 aa		13.61	□□□□□ -0.23
SREBF1-223	ENST00000584760	CNOT8	Q9UFF9	292 aa	Known RBP	13.61	□□□□□ -0.23
SREBF1-223	ENST00000584760	EIF2B4	Q9UI10	523 aa	Known RBP	13.61	□□□□□ -0.23
SREBF1-223	ENST00000584760	SARDH	Q9UL12	918 aa		13.61	□□□□□ -0.23
SREBF1-223	ENST00000584760	FZD10	Q9ULW2	581 aa		13.61	□□□□□ -0.23
SREBF1-223	ENST00000584760	NCKAP1	Q9Y2A7	1128 aa		13.61	□□□□□ -0.23
SREBF1-223	ENST00000584760	BZW2	Q9Y6E2	419 aa	Known RBP	13.61	□□□□□ -0.23
SREBF1-223	ENST00000584760	DMXL2	Q8TDJ6	3036 aa		13.61	□□□□□ -0.23
SREBF1-223	ENST00000584760	TMEM191C	A6NGB0	347 aa		13.6	□□□□□ -0.23
SREBF1-223	ENST00000584760	CBX4	O00257	560 aa		13.6	□□□□□ -0.23
SREBF1-223	ENST00000584760	MCF2L	O15068	1137 aa		13.6	□□□□□ -0.23
SREBF1-223	ENST00000584760	BCAT2	O15382	392 aa	Predicted RBP	13.6	□□□□□ -0.23
SREBF1-223	ENST00000584760	SMAD6	O43541	496 aa	Known RBP	13.6	□□□□□ -0.23
SREBF1-223	ENST00000584760	RNASEH2A	O75792	299 aa	Known RBP	13.6	□□□□□ -0.23
SREBF1-223	ENST00000584760	SERPING1	P05155	500 aa		13.6	□□□□□ -0.23
SREBF1-223	ENST00000584760	IGHV4-34	P06331	123 aa		13.6	□□□□□ -0.23
SREBF1-223	ENST00000584760	PSMA2	P25787	234 aa		13.6	□□□□□ -0.23
SREBF1-223	ENST00000584760	ACVRL1	P37023	503 aa		13.6	□□□□□ -0.23
SREBF1-223	ENST00000584760	SERPINH1	P50454	418 aa	Known RBP	13.6	□□□□□ -0.23
SREBF1-223	ENST00000584760	SFSWAP	Q12872	951 aa	Known RBP	13.6	□□□□□ -0.23
SREBF1-223	ENST00000584760	SCYL2	Q6P3W7	929 aa		13.6	□□□□□ -0.23
SREBF1-223	ENST00000584760	CCNI2	Q6ZMN8	369 aa	Predicted RBP	13.6	□□□□□ -0.23
SREBF1-223	ENST00000584760	DSG4	Q86SJ6	1040 aa		13.6	□□□□□ -0.23
SREBF1-223	ENST00000584760	NAXD	Q8IW45	347 aa		13.6	□□□□□ -0.23
SREBF1-223	ENST00000584760	ARFGAP1	Q8N6T3	406 aa		13.6	□□□□□ -0.23
SREBF1-223	ENST00000584760	OR2A12	Q8NGT7	310 aa		13.6	□□□□□ -0.23
SREBF1-223	ENST00000584760	MDM1	Q8TC05	714 aa		13.6	□□□□□ -0.23
SREBF1-223	ENST00000584760	GANC	Q8TET4	914 aa		13.6	□□□□□ -0.23
SREBF1-223	ENST00000584760	CPLX3	Q8WVH0	158 aa		13.6	□□□□□ -0.23
SREBF1-223	ENST00000584760	SNX19	Q92543	992 aa		13.6	□□□□□ -0.23
SREBF1-223	ENST00000584760	TRIM11	Q96F44	468 aa		13.6	□□□□□ -0.23
SREBF1-223	ENST00000584760	PEBP4	Q96S96	227 aa		13.6	□□□□□ -0.23
SREBF1-223	ENST00000584760	OMD	Q99983	421 aa		13.6	□□□□□ -0.23
SREBF1-223	ENST00000584760	SPON2	Q9BUD6	331 aa		13.6	□□□□□ -0.23
SREBF1-223	ENST00000584760	MIR1-1HG	Q9H1L0	117 aa		13.6	□□□□□ -0.23
SREBF1-223	ENST00000584760	NEUROG2	Q9H2A3	272 aa		13.6	□□□□□ -0.23
SREBF1-223	ENST00000584760	TSPY26P	Q9H489	355 aa		13.6	□□□□□ -0.23
SREBF1-223	ENST00000584760	DNAI1	Q9UI46	699 aa		13.6	□□□□□ -0.23
SREBF1-223	ENST00000584760	PPM1H	Q9ULR3	514 aa		13.6	□□□□□ -0.23
SREBF1-223	ENST00000584760	CXorf51A	A0A1B0GTR3	108 aa		13.59	□□□□□ -0.23
SREBF1-223	ENST00000584760	ZNF821	O75541	412 aa	Predicted RBP	13.59	□□□□□ -0.23
SREBF1-223	ENST00000584760	GJB3	O75712	270 aa		13.59	□□□□□ -0.23
SREBF1-223	ENST00000584760	CD160	O95971	181 aa		13.59	□□□□□ -0.23
SREBF1-223	ENST00000584760	TPM3	P06753	285 aa		13.59	□□□□□ -0.23
SREBF1-223	ENST00000584760	CTSL	P07711	333 aa		13.59	□□□□□ -0.23
SREBF1-223	ENST00000584760	MYBL1	P10243	752 aa		13.59	□□□□□ -0.23
SREBF1-223	ENST00000584760	GOT1	P17174	413 aa		13.59	□□□□□ -0.23
SREBF1-223	ENST00000584760	DES	P17661	470 aa		13.59	□□□□□ -0.23
SREBF1-223	ENST00000584760	ETFB	P38117	255 aa		13.59	□□□□□ -0.23
SREBF1-223	ENST00000584760	GALC	P54803	685 aa		13.59	□□□□□ -0.23
SREBF1-223	ENST00000584760	GRIK2	Q13002	908 aa		13.59	□□□□□ -0.23
SREBF1-223	ENST00000584760	KIAA0895L	Q68EN5	471 aa		13.59	□□□□□ -0.23
SREBF1-223	ENST00000584760	RETSAT	Q6NUM9	610 aa		13.59	□□□□□ -0.23
SREBF1-223	ENST00000584760	NCEH1	Q6PIU2	408 aa		13.59	□□□□□ -0.23
SREBF1-223	ENST00000584760	CYP4V2	Q6ZWL3	525 aa	Predicted RBP	13.59	□□□□□ -0.23
SREBF1-223	ENST00000584760	SLCO6A1	Q86UG4	719 aa		13.59	□□□□□ -0.23
SREBF1-223	ENST00000584760	RTL3	Q8N8U3	475 aa	Known RBP	13.59	□□□□□ -0.23
SREBF1-223	ENST00000584760	OR2T34	Q8NGX1	318 aa		13.59	□□□□□ -0.23
SREBF1-223	ENST00000584760	PIP4K2C	Q8TBX8	421 aa		13.59	□□□□□ -0.23
SREBF1-223	ENST00000584760	ARHGEF2	Q92974	986 aa	Known RBP	13.59	□□□□□ -0.23
SREBF1-223	ENST00000584760	EPAS1	Q99814	870 aa		13.59	□□□□□ -0.23
SREBF1-223	ENST00000584760	CEP44	Q9C0F1	390 aa		13.59	□□□□□ -0.23
SREBF1-223	ENST00000584760	NOL6	Q9H6R4	1146 aa	Known RBP	13.59	□□□□□ -0.23
SREBF1-223	ENST00000584760	ARHGAP20	Q9P2F6	1191 aa		13.59	□□□□□ -0.23
SREBF1-223	ENST00000584760	APOBEC2	Q9Y235	224 aa	Known RBP	13.59	□□□□□ -0.23
SREBF1-223	ENST00000584760	RAX	Q9Y2V3	346 aa		13.59	□□□□□ -0.23
SREBF1-223	ENST00000584760	LUC7L2	Q9Y383	392 aa	Known RBP	13.59	□□□□□ -0.23
SREBF1-223	ENST00000584760	SCIN	Q9Y6U3	715 aa		13.59	□□□□□ -0.23
SREBF1-223	ENST00000584760	WDFY3	Q8IZQ1	3526 aa		13.58	□□□□□ -0.24
SREBF1-223	ENST00000584760		A0A087X0T9	212 aa		13.58	□□□□□ -0.24
SREBF1-223	ENST00000584760	FAM47DP	A6NHR8	397 aa		13.58	□□□□□ -0.24
SREBF1-223	ENST00000584760	LRRC72	A6NJI9	287 aa		13.58	□□□□□ -0.24
SREBF1-223	ENST00000584760	C1QTNF3-AMACR	E9PGA6	284 aa		13.58	□□□□□ -0.24
SREBF1-223	ENST00000584760	SLC7A4	O43246	635 aa		13.58	□□□□□ -0.24
SREBF1-223	ENST00000584760	BNIP3L	O60238	219 aa		13.58	□□□□□ -0.24
SREBF1-223	ENST00000584760	RAMP2	O60895	175 aa		13.58	□□□□□ -0.24
SREBF1-223	ENST00000584760	FSBP	O95073	299 aa		13.58	□□□□□ -0.24
SREBF1-223	ENST00000584760	FAM228B	P0C875	321 aa		13.58	□□□□□ -0.24
SREBF1-223	ENST00000584760	CD27	P26842	260 aa		13.58	□□□□□ -0.24
SREBF1-223	ENST00000584760	EPHB2	P29323	1055 aa		13.58	□□□□□ -0.24
SREBF1-223	ENST00000584760	HNRNPH3	P31942	346 aa	Known RBP	13.58	□□□□□ -0.24
SREBF1-223	ENST00000584760	CASP14	P31944	242 aa		13.58	□□□□□ -0.24
SREBF1-223	ENST00000584760	BNC1	Q01954	994 aa		13.58	□□□□□ -0.24
SREBF1-223	ENST00000584760	NFKBIB	Q15653	356 aa		13.58	□□□□□ -0.24
SREBF1-223	ENST00000584760	AGBL4	Q5VU57	503 aa		13.58	□□□□□ -0.24
SREBF1-223	ENST00000584760	FAM46C	Q5VWP2	391 aa		13.58	□□□□□ -0.24
SREBF1-223	ENST00000584760	VPS36	Q86VN1	386 aa		13.58	□□□□□ -0.24
SREBF1-223	ENST00000584760	PCDH20	Q8N6Y1	951 aa	Known RBP	13.58	□□□□□ -0.24
SREBF1-223	ENST00000584760	RNF214	Q8ND24	703 aa		13.58	□□□□□ -0.24
SREBF1-223	ENST00000584760	SETD7	Q8WTS6	366 aa	Known RBP	13.58	□□□□□ -0.24
SREBF1-223	ENST00000584760	CCDC114	Q96M63	670 aa		13.58	□□□□□ -0.24
SREBF1-223	ENST00000584760	SNRNP25	Q9BV90	132 aa	Known RBP	13.58	□□□□□ -0.24
SREBF1-223	ENST00000584760	MAGEH1	Q9H213	219 aa		13.58	□□□□□ -0.24
SREBF1-223	ENST00000584760	TNKS2	Q9H2K2	1166 aa		13.58	□□□□□ -0.24
SREBF1-223	ENST00000584760	MRPL47	Q9HD33	250 aa	Known RBP	13.58	□□□□□ -0.24

Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms