RNA–Protein interactions for RNA: ENST00000583965.5

CDRT1-207, CMT1A duplicated region transcript 1, humanhuman

TSL 1 (best) BASIC

Gene CDRT1, Length 562 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1-207ENST00000583965 RBL1P28749 1068 aa11.87□□□□□ -0.51
CDRT1-207ENST00000583965 COILP38432 576 aaPredicted RBP11.87□□□□□ -0.51
CDRT1-207ENST00000583965 HSPA9P38646 679 aaKnown RBP11.87□□□□□ -0.51
CDRT1-207ENST00000583965 CTSOP43234 321 aaPredicted RBP11.87□□□□□ -0.51
CDRT1-207ENST00000583965 KIR2DL1P43626 348 aaPredicted RBP11.87□□□□□ -0.51
CDRT1-207ENST00000583965 SNX1Q13596 522 aa11.87□□□□□ -0.51
CDRT1-207ENST00000583965 LRRC32Q14392 662 aa11.87□□□□□ -0.51
CDRT1-207ENST00000583965 LBRQ14739 615 aaKnown RBP11.87□□□□□ -0.51
CDRT1-207ENST00000583965 PTPRNQ16849 979 aa11.87□□□□□ -0.51
CDRT1-207ENST00000583965 MARC1Q5VT66 337 aa11.87□□□□□ -0.51
CDRT1-207ENST00000583965 LINGO4Q6UY18 593 aa11.87□□□□□ -0.51
CDRT1-207ENST00000583965 SFTPA1Q8IWL2 248 aa11.87□□□□□ -0.51
CDRT1-207ENST00000583965 ZNF513Q8N8E2 541 aaPredicted RBP11.87□□□□□ -0.51
CDRT1-207ENST00000583965 ATP11CQ8NB49 1132 aa11.87□□□□□ -0.51
CDRT1-207ENST00000583965 SPATA4Q8NEY3 305 aa11.87□□□□□ -0.51
CDRT1-207ENST00000583965 ATL2Q8NHH9 583 aa11.87□□□□□ -0.51
CDRT1-207ENST00000583965 GRK7Q8WTQ7 553 aa11.87□□□□□ -0.51
CDRT1-207ENST00000583965 CYB5D2Q8WUJ1 264 aa11.87□□□□□ -0.51
CDRT1-207ENST00000583965 EZH1Q92800 747 aaPredicted RBP11.87□□□□□ -0.51
CDRT1-207ENST00000583965 EDAQ92838 391 aa11.87□□□□□ -0.51
CDRT1-207ENST00000583965 RTP4Q96DX8 246 aa11.87□□□□□ -0.51
CDRT1-207ENST00000583965 RPL10LQ96L21 214 aaKnown RBP11.87□□□□□ -0.51
CDRT1-207ENST00000583965 MRGPRX3Q96LB0 322 aa11.87□□□□□ -0.51
CDRT1-207ENST00000583965 IL12RB2Q99665 862 aa11.87□□□□□ -0.51
CDRT1-207ENST00000583965 USP29Q9HBJ7 922 aa11.87□□□□□ -0.51
CDRT1-207ENST00000583965 LTB4R2Q9NPC1 389 aa11.87□□□□□ -0.51
CDRT1-207ENST00000583965 SEPT3Q9UH03 358 aa11.87□□□□□ -0.51
CDRT1-207ENST00000583965 TRHDEQ9UKU6 1024 aa11.87□□□□□ -0.51
CDRT1-207ENST00000583965 ZNF148Q9UQR1 794 aa11.87□□□□□ -0.51
CDRT1-207ENST00000583965 C5orf60A6NFR6 353 aa11.86□□□□□ -0.51
CDRT1-207ENST00000583965 KCNK1O00180 336 aa11.86□□□□□ -0.51
CDRT1-207ENST00000583965 KCNN4O15554 427 aa11.86□□□□□ -0.51
CDRT1-207ENST00000583965 TMCC1O94876 653 aa11.86□□□□□ -0.51
CDRT1-207ENST00000583965 MT-CO1P00395 513 aa11.86□□□□□ -0.51
CDRT1-207ENST00000583965 CD72P21854 359 aa11.86□□□□□ -0.51
CDRT1-207ENST00000583965 MMP13P45452 471 aa11.86□□□□□ -0.51
CDRT1-207ENST00000583965 NUMBP49757 651 aa11.86□□□□□ -0.51
CDRT1-207ENST00000583965 STK19P49842 368 aaPredicted RBP11.86□□□□□ -0.51
CDRT1-207ENST00000583965 SLC10A7Q0GE19 358 aa11.86□□□□□ -0.51
CDRT1-207ENST00000583965 ENPP2Q13822 863 aa11.86□□□□□ -0.51
CDRT1-207ENST00000583965 ZNF234Q14588 700 aa11.86□□□□□ -0.51
CDRT1-207ENST00000583965 ZNF235Q14590 738 aa11.86□□□□□ -0.51
CDRT1-207ENST00000583965 FNDC3BQ53EP0 1204 aaKnown RBP11.86□□□□□ -0.51
CDRT1-207ENST00000583965 TEX44Q53QW1 395 aa11.86□□□□□ -0.51
CDRT1-207ENST00000583965 EGFLAMQ63HQ2 1017 aa11.86□□□□□ -0.51
CDRT1-207ENST00000583965 C22orf39Q6P5X5 142 aa11.86□□□□□ -0.51
CDRT1-207ENST00000583965 CCDC137Q6PK04 289 aaKnown RBP11.86□□□□□ -0.51
CDRT1-207ENST00000583965 PLPP6Q8IY26 295 aa11.86□□□□□ -0.51
CDRT1-207ENST00000583965 CCDC105Q8IYK2 499 aa11.86□□□□□ -0.51
CDRT1-207ENST00000583965 ZNF687Q8N1G0 1237 aa11.86□□□□□ -0.51
CDRT1-207ENST00000583965 PCDH20Q8N6Y1 951 aaKnown RBP11.86□□□□□ -0.51
CDRT1-207ENST00000583965 SORCS1Q8WY21 1168 aa11.86□□□□□ -0.51
CDRT1-207ENST00000583965 MYO19Q96H55 970 aa11.86□□□□□ -0.51
CDRT1-207ENST00000583965 PSKH2Q96QS6 385 aa11.86□□□□□ -0.51
CDRT1-207ENST00000583965 TMEM121Q9BTD3 319 aa11.86□□□□□ -0.51
CDRT1-207ENST00000583965 CINPQ9BW66 212 aaPredicted RBP11.86□□□□□ -0.51
CDRT1-207ENST00000583965 TMEM245Q9H330 911 aa11.86□□□□□ -0.51
CDRT1-207ENST00000583965 TBC1D17Q9HA65 648 aa11.86□□□□□ -0.51
CDRT1-207ENST00000583965 SEPT10Q9P0V9 454 aa11.86□□□□□ -0.51
CDRT1-207ENST00000583965 SUN2Q9UH99 717 aa11.86□□□□□ -0.51
CDRT1-207ENST00000583965 PCYOX1Q9UHG3 505 aa11.86□□□□□ -0.51
CDRT1-207ENST00000583965 NDRG2Q9UN36 371 aaKnown RBP11.86□□□□□ -0.51
CDRT1-207ENST00000583965 CTAGE15A4D2H0 777 aa11.85□□□□□ -0.51
CDRT1-207ENST00000583965 SGK1O00141 431 aa11.85□□□□□ -0.51
CDRT1-207ENST00000583965 RNF103O00237 685 aa11.85□□□□□ -0.51
CDRT1-207ENST00000583965 DYNC1I1O14576 645 aa11.85□□□□□ -0.51
CDRT1-207ENST00000583965 OPHN1O60890 802 aa11.85□□□□□ -0.51
CDRT1-207ENST00000583965 GCATO75600 419 aa11.85□□□□□ -0.51
CDRT1-207ENST00000583965 GSRP00390 522 aa11.85□□□□□ -0.51
CDRT1-207ENST00000583965 JCHAINP01591 159 aa11.85□□□□□ -0.51
CDRT1-207ENST00000583965 CTAGE8P0CG41 777 aa11.85□□□□□ -0.51
CDRT1-207ENST00000583965 CHRM1P11229 460 aaPredicted RBP11.85□□□□□ -0.51
CDRT1-207ENST00000583965 CHRNB1P11230 501 aa11.85□□□□□ -0.51
CDRT1-207ENST00000583965 CES1P23141 567 aa11.85□□□□□ -0.51
CDRT1-207ENST00000583965 PTPN3P26045 913 aa11.85□□□□□ -0.51
CDRT1-207ENST00000583965 TARSP26639 723 aaKnown RBP11.85□□□□□ -0.51
CDRT1-207ENST00000583965 NTSR1P30989 418 aa11.85□□□□□ -0.51
CDRT1-207ENST00000583965 TIE1P35590 1138 aa11.85□□□□□ -0.51
CDRT1-207ENST00000583965 ACTN2P35609 894 aa11.85□□□□□ -0.51
CDRT1-207ENST00000583965 SEC13P55735 322 aa11.85□□□□□ -0.51
CDRT1-207ENST00000583965 NSUN2Q08J23 767 aaKnown RBP eCLIP11.85□□□□□ -0.51
CDRT1-207ENST00000583965 WASHC5Q12768 1159 aa11.85□□□□□ -0.51
CDRT1-207ENST00000583965 UBXN2BQ14CS0 331 aa11.85□□□□□ -0.51
CDRT1-207ENST00000583965 CYTH1Q15438 398 aa11.85□□□□□ -0.51
CDRT1-207ENST00000583965 DLG2Q15700 870 aa11.85□□□□□ -0.51
CDRT1-207ENST00000583965 ACCSLQ4AC99 568 aa11.85□□□□□ -0.51
CDRT1-207ENST00000583965 RALGPS1Q5JS13 557 aa11.85□□□□□ -0.51
CDRT1-207ENST00000583965 SDE2Q6IQ49 451 aa11.85□□□□□ -0.51
CDRT1-207ENST00000583965 TTC27Q6P3X3 843 aa11.85□□□□□ -0.51
CDRT1-207ENST00000583965 SERPINA13PQ6UXR4 307 aa11.85□□□□□ -0.51
CDRT1-207ENST00000583965 C4orf22Q6V702 233 aa11.85□□□□□ -0.51
CDRT1-207ENST00000583965 LEKR1Q6ZMV7 388 aa11.85□□□□□ -0.51
CDRT1-207ENST00000583965 B4GALNT4Q76KP1 1039 aa11.85□□□□□ -0.51
CDRT1-207ENST00000583965 GSTA5Q7RTV2 222 aa11.85□□□□□ -0.51
CDRT1-207ENST00000583965 CTAGE6Q86UF2 777 aa11.85□□□□□ -0.51
CDRT1-207ENST00000583965 CTAGE4Q8IX94 777 aa11.85□□□□□ -0.51
CDRT1-207ENST00000583965 ALLCQ8N6M5 410 aa11.85□□□□□ -0.51
CDRT1-207ENST00000583965 FAM71DQ8N9W8 422 aa11.85□□□□□ -0.51
CDRT1-207ENST00000583965 USP33Q8TEY7 942 aa11.85□□□□□ -0.51
CDRT1-207ENST00000583965 LRRN4Q8WUT4 740 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms