RNA–Protein interactions for RNA: ENST00000582288.1

TVP23B-210, Transcript of trans-golgi network vesicle protein 23 homolog B, humanhuman

TSL 3

Gene TVP23B, Length 336 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23B-210ENST00000582288 VAMP7P51809 220 aa6.39□□□□□ -1.39
TVP23B-210ENST00000582288 METAP1P53582 386 aa6.39□□□□□ -1.39
TVP23B-210ENST00000582288 POLE2P56282 527 aa6.39□□□□□ -1.39
TVP23B-210ENST00000582288 RIPPLY3P57055 190 aa6.39□□□□□ -1.39
TVP23B-210ENST00000582288 RPS21P63220 83 aaKnown RBP6.39□□□□□ -1.39
TVP23B-210ENST00000582288 ADIGQ0VDE8 80 aa6.39□□□□□ -1.39
TVP23B-210ENST00000582288 MTA1Q13330 715 aa6.39□□□□□ -1.39
TVP23B-210ENST00000582288 PTK2BQ14289 1009 aa6.39□□□□□ -1.39
TVP23B-210ENST00000582288 SLC39A14Q15043 492 aa6.39□□□□□ -1.39
TVP23B-210ENST00000582288 NFIL3Q16649 462 aa6.39□□□□□ -1.39
TVP23B-210ENST00000582288 POM121L1PQ3SYA9 428 aa6.39□□□□□ -1.39
TVP23B-210ENST00000582288 DCAF6Q58WW2 860 aa6.39□□□□□ -1.39
TVP23B-210ENST00000582288 PERM1Q5SV97 790 aa6.39□□□□□ -1.39
TVP23B-210ENST00000582288 KIAA1161Q6NSJ0 714 aa6.39□□□□□ -1.39
TVP23B-210ENST00000582288 ESRP1Q6NXG1 681 aaKnown RBP6.39□□□□□ -1.39
TVP23B-210ENST00000582288 MMS22LQ6ZRQ5 1243 aa6.39□□□□□ -1.39
TVP23B-210ENST00000582288 INTS8Q75QN2 995 aaKnown RBP6.39□□□□□ -1.39
TVP23B-210ENST00000582288 ATCAYQ86WG3 371 aa6.39□□□□□ -1.39
TVP23B-210ENST00000582288 APCDD1Q8J025 514 aa6.39□□□□□ -1.39
TVP23B-210ENST00000582288 GPBAR1Q8TDU6 330 aa6.39□□□□□ -1.39
TVP23B-210ENST00000582288 TMX3Q96JJ7 454 aa6.39□□□□□ -1.39
TVP23B-210ENST00000582288 FCRL2Q96LA5 508 aaPredicted RBP6.39□□□□□ -1.39
TVP23B-210ENST00000582288 CCDC114Q96M63 670 aa6.39□□□□□ -1.39
TVP23B-210ENST00000582288 SERPINB11Q96P15 392 aa6.39□□□□□ -1.39
TVP23B-210ENST00000582288 CATSPER2Q96P56 530 aa6.39□□□□□ -1.39
TVP23B-210ENST00000582288 NOX5Q96PH1 765 aa6.39□□□□□ -1.39
TVP23B-210ENST00000582288 TRIM62Q9BVG3 475 aa6.39□□□□□ -1.39
TVP23B-210ENST00000582288 PANK2Q9BZ23 570 aa6.39□□□□□ -1.39
TVP23B-210ENST00000582288 CISHQ9NSE2 258 aa6.39□□□□□ -1.39
TVP23B-210ENST00000582288 HESX1Q9UBX0 185 aa6.39□□□□□ -1.39
TVP23B-210ENST00000582288 PLEKHB1Q9UF11 243 aaPredicted RBP6.39□□□□□ -1.39
TVP23B-210ENST00000582288 SLC25A13Q9UJS0 675 aa6.39□□□□□ -1.39
TVP23B-210ENST00000582288 SMC3Q9UQE7 1217 aa6.39□□□□□ -1.39
TVP23B-210ENST00000582288 CA5BQ9Y2D0 317 aa6.39□□□□□ -1.39
TVP23B-210ENST00000582288 FRMD4BQ9Y2L6 1034 aa6.39□□□□□ -1.39
TVP23B-210ENST00000582288 LRRK2Q5S007 2527 aa6.39□□□□□ -1.39
TVP23B-210ENST00000582288 USP9YO00507 2555 aaPredicted RBP6.39□□□□□ -1.39
TVP23B-210ENST00000582288 DOPEY2Q9Y3R5 2298 aa6.38□□□□□ -1.39
TVP23B-210ENST00000582288 SPENQ96T58 3664 aaKnown RBP6.38□□□□□ -1.39
TVP23B-210ENST00000582288 TCAF2A6NFQ2 919 aa6.38□□□□□ -1.39
TVP23B-210ENST00000582288 D6RAR5 112 aa6.38□□□□□ -1.39
TVP23B-210ENST00000582288 TULP2O00295 520 aa6.38□□□□□ -1.39
TVP23B-210ENST00000582288 FPGTO14772 594 aa6.38□□□□□ -1.39
TVP23B-210ENST00000582288 MUSKO15146 869 aa6.38□□□□□ -1.39
TVP23B-210ENST00000582288 AP1G1O43747 822 aa6.38□□□□□ -1.39
TVP23B-210ENST00000582288 FBXO21O94952 628 aa6.38□□□□□ -1.39
TVP23B-210ENST00000582288 NR3C1P04150 777 aa6.38□□□□□ -1.39
TVP23B-210ENST00000582288 PRNPP04156 253 aa6.38□□□□□ -1.39
TVP23B-210ENST00000582288 CENPBP07199 599 aaPredicted RBP6.38□□□□□ -1.39
TVP23B-210ENST00000582288 ZNF18P17022 549 aa6.38□□□□□ -1.39
TVP23B-210ENST00000582288 JUNDP17535 347 aa6.38□□□□□ -1.39
TVP23B-210ENST00000582288 PDCP20941 246 aa6.38□□□□□ -1.39
TVP23B-210ENST00000582288 ITGB7P26010 798 aa6.38□□□□□ -1.39
TVP23B-210ENST00000582288 RECQLP46063 649 aaPredicted RBP6.38□□□□□ -1.39
TVP23B-210ENST00000582288 STK19P49842 368 aaPredicted RBP6.38□□□□□ -1.39
TVP23B-210ENST00000582288 CLDN2P57739 230 aa6.38□□□□□ -1.39
TVP23B-210ENST00000582288 PFN3P60673 137 aa6.38□□□□□ -1.39
TVP23B-210ENST00000582288 YPEL5P62699 121 aa6.38□□□□□ -1.39
TVP23B-210ENST00000582288 ZFP36L1Q07352 338 aaKnown RBP6.38□□□□□ -1.39
TVP23B-210ENST00000582288 DLG2Q15700 870 aa6.38□□□□□ -1.39
TVP23B-210ENST00000582288 IGFBP7Q16270 282 aa6.38□□□□□ -1.39
TVP23B-210ENST00000582288 DEFB133Q30KQ1 61 aa6.38□□□□□ -1.39
TVP23B-210ENST00000582288 ZNF394Q53GI3 561 aa6.38□□□□□ -1.39
TVP23B-210ENST00000582288 ZNF542PQ5EBM4 170 aa6.38□□□□□ -1.39
TVP23B-210ENST00000582288 TMEM164Q5U3C3 297 aa6.38□□□□□ -1.39
TVP23B-210ENST00000582288 ERN2Q76MJ5 926 aaKnown RBP6.38□□□□□ -1.39
TVP23B-210ENST00000582288 JAMLQ86YT9 394 aa6.38□□□□□ -1.39
TVP23B-210ENST00000582288 SLC35F3Q8IY50 421 aa6.38□□□□□ -1.39
TVP23B-210ENST00000582288 CFAP52Q8N1V2 620 aa6.38□□□□□ -1.39
TVP23B-210ENST00000582288 SH2D3CQ8N5H7 860 aa6.38□□□□□ -1.39
TVP23B-210ENST00000582288 PDILTQ8N807 584 aa6.38□□□□□ -1.39
TVP23B-210ENST00000582288 ARL10Q8N8L6 244 aa6.38□□□□□ -1.39
TVP23B-210ENST00000582288 DENND6BQ8NEG7 585 aa6.38□□□□□ -1.39
TVP23B-210ENST00000582288 TAS1R2Q8TE23 839 aa6.38□□□□□ -1.39
TVP23B-210ENST00000582288 SLC35F5Q8WV83 523 aa6.38□□□□□ -1.39
TVP23B-210ENST00000582288 HTR3CQ8WXA8 447 aa6.38□□□□□ -1.39
TVP23B-210ENST00000582288 SCG3Q8WXD2 468 aaKnown RBP6.38□□□□□ -1.39
TVP23B-210ENST00000582288 NDRG1Q92597 394 aaKnown RBP6.38□□□□□ -1.39
TVP23B-210ENST00000582288 RNF34Q969K3 372 aa6.38□□□□□ -1.39
TVP23B-210ENST00000582288 MIB2Q96AX9 1013 aa6.38□□□□□ -1.39
TVP23B-210ENST00000582288 MYEOVQ96EZ4 313 aa6.38□□□□□ -1.39
TVP23B-210ENST00000582288 ALG14Q96F25 216 aa6.38□□□□□ -1.39
TVP23B-210ENST00000582288 PPP1R16AQ96I34 528 aa6.38□□□□□ -1.39
TVP23B-210ENST00000582288 FEM1CQ96JP0 617 aa6.38□□□□□ -1.39
TVP23B-210ENST00000582288 BTN2A3PQ96KV6 586 aa6.38□□□□□ -1.39
TVP23B-210ENST00000582288 GFM1Q96RP9 751 aaKnown RBP6.38□□□□□ -1.39
TVP23B-210ENST00000582288 CMKLR1Q99788 373 aa6.38□□□□□ -1.39
TVP23B-210ENST00000582288 SLC12A9Q9BXP2 914 aa6.38□□□□□ -1.39
TVP23B-210ENST00000582288 SLC17A9Q9BYT1 436 aa6.38□□□□□ -1.39
TVP23B-210ENST00000582288 CDH19Q9H159 772 aa6.38□□□□□ -1.39
TVP23B-210ENST00000582288 NUCKS1Q9H1E3 243 aaKnown RBP6.38□□□□□ -1.39
TVP23B-210ENST00000582288 KCTD10Q9H3F6 313 aa6.38□□□□□ -1.39
TVP23B-210ENST00000582288 EPB41L5Q9HCM4 733 aa6.38□□□□□ -1.39
TVP23B-210ENST00000582288 TMEM8AQ9HCN3 771 aa6.38□□□□□ -1.39
TVP23B-210ENST00000582288 SLC39A2Q9NP94 309 aa6.38□□□□□ -1.39
TVP23B-210ENST00000582288 DYRK4Q9NR20 520 aa6.38□□□□□ -1.39
TVP23B-210ENST00000582288 TMPRSS4Q9NRS4 437 aa6.38□□□□□ -1.39
TVP23B-210ENST00000582288 IPO11Q9UI26 975 aaKnown RBP6.38□□□□□ -1.39
TVP23B-210ENST00000582288 KLF15Q9UIH9 416 aa6.38□□□□□ -1.39
TVP23B-210ENST00000582288 TSPAN16Q9UKR8 245 aa6.38□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms