RNA–Protein interactions for RNA: ENST00000580986.1

CCDC47-203, Transcript of coiled-coil domain containing 47, humanhuman

TSL 4

Gene CCDC47, Length 552 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-203ENST00000580986 RBP3P10745 1247 aa10.6□□□□□ -0.71
CCDC47-203ENST00000580986 TARSP26639 723 aaKnown RBP10.6□□□□□ -0.71
CCDC47-203ENST00000580986 STIP1P31948 543 aaKnown RBP10.6□□□□□ -0.71
CCDC47-203ENST00000580986 PAFAH1B1P43034 410 aa10.6□□□□□ -0.71
CCDC47-203ENST00000580986 RENBPP51606 427 aa10.6□□□□□ -0.71
CCDC47-203ENST00000580986 ST8SIA6P61647 398 aa10.6□□□□□ -0.71
CCDC47-203ENST00000580986 IFI35P80217 286 aaPredicted RBP10.6□□□□□ -0.71
CCDC47-203ENST00000580986 NSUN2Q08J23 767 aaKnown RBP eCLIP10.6□□□□□ -0.71
CCDC47-203ENST00000580986 FZD5Q13467 585 aa10.6□□□□□ -0.71
CCDC47-203ENST00000580986 OASLQ15646 514 aaKnown RBP10.6□□□□□ -0.71
CCDC47-203ENST00000580986 PTPRNQ16849 979 aa10.6□□□□□ -0.71
CCDC47-203ENST00000580986 LONRF2Q1L5Z9 754 aa10.6□□□□□ -0.71
CCDC47-203ENST00000580986 RALGPS1Q5JS13 557 aa10.6□□□□□ -0.71
CCDC47-203ENST00000580986 NAIF1Q69YI7 327 aaPredicted RBP10.6□□□□□ -0.71
CCDC47-203ENST00000580986 ALG1LQ6GMV1 187 aa10.6□□□□□ -0.71
CCDC47-203ENST00000580986 CDKL3Q8IVW4 592 aaPredicted RBP10.6□□□□□ -0.71
CCDC47-203ENST00000580986 CCDC13Q8IYE1 715 aa10.6□□□□□ -0.71
CCDC47-203ENST00000580986 BBS5Q8N3I7 341 aa10.6□□□□□ -0.71
CCDC47-203ENST00000580986 PCDH20Q8N6Y1 951 aaKnown RBP10.6□□□□□ -0.71
CCDC47-203ENST00000580986 USP33Q8TEY7 942 aa10.6□□□□□ -0.71
CCDC47-203ENST00000580986 NSMCE1Q8WV22 266 aa10.6□□□□□ -0.71
CCDC47-203ENST00000580986 RTP4Q96DX8 246 aa10.6□□□□□ -0.71
CCDC47-203ENST00000580986 MRGPRX3Q96LB0 322 aa10.6□□□□□ -0.71
CCDC47-203ENST00000580986 PSKH2Q96QS6 385 aa10.6□□□□□ -0.71
CCDC47-203ENST00000580986 GABRG3Q99928 467 aa10.6□□□□□ -0.71
CCDC47-203ENST00000580986 SPON2Q9BUD6 331 aa10.6□□□□□ -0.71
CCDC47-203ENST00000580986 CIPCQ9C0C6 399 aa10.6□□□□□ -0.71
CCDC47-203ENST00000580986 TBC1D17Q9HA65 648 aa10.6□□□□□ -0.71
CCDC47-203ENST00000580986 SP110Q9HB58 689 aa10.6□□□□□ -0.71
CCDC47-203ENST00000580986 UBA2Q9UBT2 640 aaPredicted RBP10.6□□□□□ -0.71
CCDC47-203ENST00000580986 CDC23Q9UJX2 597 aa10.6□□□□□ -0.71
CCDC47-203ENST00000580986 ERVW-1Q9UQF0 538 aa10.6□□□□□ -0.71
CCDC47-203ENST00000580986 CKAP5Q14008 2032 aa10.6□□□□□ -0.71
CCDC47-203ENST00000580986 TCRBV7S2A1N4TA0A589 114 aa10.59□□□□□ -0.71
CCDC47-203ENST00000580986 TARSL2A2RTX5 802 aaKnown RBP10.59□□□□□ -0.71
CCDC47-203ENST00000580986 CCDC188H7C350 402 aa10.59□□□□□ -0.71
CCDC47-203ENST00000580986 J3KR12 359 aa10.59□□□□□ -0.71
CCDC47-203ENST00000580986 ZNF185O15231 689 aa10.59□□□□□ -0.71
CCDC47-203ENST00000580986 ALOX15BO15296 676 aa10.59□□□□□ -0.71
CCDC47-203ENST00000580986 LIASO43766 372 aa10.59□□□□□ -0.71
CCDC47-203ENST00000580986 SNAP91O60641 907 aa10.59□□□□□ -0.71
CCDC47-203ENST00000580986 ATG13O75143 517 aa10.59□□□□□ -0.71
CCDC47-203ENST00000580986 SRCP12931 536 aa10.59□□□□□ -0.71
CCDC47-203ENST00000580986 CES1P23141 567 aa10.59□□□□□ -0.71
CCDC47-203ENST00000580986 NTSR1P30989 418 aa10.59□□□□□ -0.71
CCDC47-203ENST00000580986 CSNK1DP48730 415 aa10.59□□□□□ -0.71
CCDC47-203ENST00000580986 FNTAP49354 379 aa10.59□□□□□ -0.71
CCDC47-203ENST00000580986 CLCN5P51795 746 aa10.59□□□□□ -0.71
CCDC47-203ENST00000580986 EIF3EP60228 445 aaKnown RBP10.59□□□□□ -0.71
CCDC47-203ENST00000580986 LMNB2Q03252 620 aa10.59□□□□□ -0.71
CCDC47-203ENST00000580986 BYSLQ13895 437 aaKnown RBP10.59□□□□□ -0.71
CCDC47-203ENST00000580986 ZNF234Q14588 700 aa10.59□□□□□ -0.71
CCDC47-203ENST00000580986 SLC14A2Q15849 920 aa10.59□□□□□ -0.71
CCDC47-203ENST00000580986 WHAMMP3Q1A5X7 153 aa10.59□□□□□ -0.71
CCDC47-203ENST00000580986 HNRNPA1L2Q32P51 320 aaKnown RBP10.59□□□□□ -0.71
CCDC47-203ENST00000580986 PROX2Q3B8N5 592 aa10.59□□□□□ -0.71
CCDC47-203ENST00000580986 HEATR6Q6AI08 1181 aaKnown RBP10.59□□□□□ -0.71
CCDC47-203ENST00000580986 NPNTQ6UXI9 565 aa10.59□□□□□ -0.71
CCDC47-203ENST00000580986 TP53INP2Q8IXH6 220 aa10.59□□□□□ -0.71
CCDC47-203ENST00000580986 CCDC105Q8IYK2 499 aa10.59□□□□□ -0.71
CCDC47-203ENST00000580986 ZNF513Q8N8E2 541 aaPredicted RBP10.59□□□□□ -0.71
CCDC47-203ENST00000580986 PRELID2Q8N945 189 aa10.59□□□□□ -0.71
CCDC47-203ENST00000580986 IL17RCQ8NAC3 791 aa10.59□□□□□ -0.71
CCDC47-203ENST00000580986 FRS2Q8WU20 508 aa10.59□□□□□ -0.71
CCDC47-203ENST00000580986 SLCO2A1Q92959 643 aa10.59□□□□□ -0.71
CCDC47-203ENST00000580986 CCDC114Q96M63 670 aa10.59□□□□□ -0.71
CCDC47-203ENST00000580986 RUNDC3BQ96NL0 473 aa10.59□□□□□ -0.71
CCDC47-203ENST00000580986 IL12RB2Q99665 862 aa10.59□□□□□ -0.71
CCDC47-203ENST00000580986 MGME1Q9BQP7 344 aa10.59□□□□□ -0.71
CCDC47-203ENST00000580986 CHRDQ9H2X0 955 aa10.59□□□□□ -0.71
CCDC47-203ENST00000580986 SAE1Q9UBE0 346 aaPredicted RBP10.59□□□□□ -0.71
CCDC47-203ENST00000580986 SEPT3Q9UH03 358 aa10.59□□□□□ -0.71
CCDC47-203ENST00000580986 FEZ2Q9UHY8 353 aaPredicted RBP10.59□□□□□ -0.71
CCDC47-203ENST00000580986 HCN2Q9UL51 889 aa10.59□□□□□ -0.71
CCDC47-203ENST00000580986 DRG1Q9Y295 367 aaKnown RBP10.59□□□□□ -0.71
CCDC47-203ENST00000580986 TTC28Q96AY4 2481 aa10.58□□□□□ -0.72
CCDC47-203ENST00000580986 TECTAO75443 2155 aa10.58□□□□□ -0.72
CCDC47-203ENST00000580986 EDDM13A0A1B0GTR0 161 aa10.58□□□□□ -0.72
CCDC47-203ENST00000580986 RNF40O75150 1001 aa10.58□□□□□ -0.72
CCDC47-203ENST00000580986 PHF2O75151 1096 aa10.58□□□□□ -0.72
CCDC47-203ENST00000580986 TMCC1O94876 653 aa10.58□□□□□ -0.72
CCDC47-203ENST00000580986 PAPSS2O95340 614 aaPredicted RBP10.58□□□□□ -0.72
CCDC47-203ENST00000580986 GSRP00390 522 aa10.58□□□□□ -0.72
CCDC47-203ENST00000580986 CCNB1P14635 433 aa10.58□□□□□ -0.72
CCDC47-203ENST00000580986 COL9A1P20849 921 aa10.58□□□□□ -0.72
CCDC47-203ENST00000580986 GLDCP23378 1020 aa10.58□□□□□ -0.72
CCDC47-203ENST00000580986 CHRNA3P32297 505 aa10.58□□□□□ -0.72
CCDC47-203ENST00000580986 MAPK8P45983 427 aa10.58□□□□□ -0.72
CCDC47-203ENST00000580986 CKAP4Q07065 602 aaKnown RBP10.58□□□□□ -0.72
CCDC47-203ENST00000580986 CAMK2GQ13555 558 aaPredicted RBP10.58□□□□□ -0.72
CCDC47-203ENST00000580986 LBRQ14739 615 aaKnown RBP10.58□□□□□ -0.72
CCDC47-203ENST00000580986 GRM3Q14832 879 aa10.58□□□□□ -0.72
CCDC47-203ENST00000580986 UBXN2BQ14CS0 331 aa10.58□□□□□ -0.72
CCDC47-203ENST00000580986 LLGL1Q15334 1064 aa10.58□□□□□ -0.72
CCDC47-203ENST00000580986 TEX44Q53QW1 395 aa10.58□□□□□ -0.72
CCDC47-203ENST00000580986 EOGTQ5NDL2 527 aa10.58□□□□□ -0.72
CCDC47-203ENST00000580986 MARC1Q5VT66 337 aa10.58□□□□□ -0.72
CCDC47-203ENST00000580986 EGFLAMQ63HQ2 1017 aa10.58□□□□□ -0.72
CCDC47-203ENST00000580986 CWF19L1Q69YN2 538 aaKnown RBP10.58□□□□□ -0.72
CCDC47-203ENST00000580986 C22orf39Q6P5X5 142 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms