RNA–Protein interactions for RNA: ENST00000580751.5

SS18-216, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 4

Gene SS18, Length 547 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-216ENST00000580751 ARF5P84085 180 aa15.82■□□□□ 0.12
SS18-216ENST00000580751 SATB1Q01826 763 aa15.82■□□□□ 0.12
SS18-216ENST00000580751 CCNG2Q16589 344 aa15.82■□□□□ 0.12
SS18-216ENST00000580751 HNRNPA1L2Q32P51 320 aaKnown RBP15.82■□□□□ 0.12
SS18-216ENST00000580751 GLE1Q53GS7 698 aaKnown RBP15.82■□□□□ 0.12
SS18-216ENST00000580751 SLC9A4Q6AI14 798 aa15.82■□□□□ 0.12
SS18-216ENST00000580751 CCDC70Q6NSX1 233 aa15.82■□□□□ 0.12
SS18-216ENST00000580751 LINGO4Q6UY18 593 aa15.82■□□□□ 0.12
SS18-216ENST00000580751 BZW1Q7L1Q6 419 aaKnown RBP15.82■□□□□ 0.12
SS18-216ENST00000580751 LRRC49Q8IUZ0 686 aa15.82■□□□□ 0.12
SS18-216ENST00000580751 MMGT1Q8N4V1 131 aa15.82■□□□□ 0.12
SS18-216ENST00000580751 SH2D3CQ8N5H7 860 aa15.82■□□□□ 0.12
SS18-216ENST00000580751 ATPAF2Q8N5M1 289 aa15.82■□□□□ 0.12
SS18-216ENST00000580751 CAMKK1Q8N5S9 505 aa15.82■□□□□ 0.12
SS18-216ENST00000580751 C12orf50Q8NA57 414 aaPredicted RBP15.82■□□□□ 0.12
SS18-216ENST00000580751 ATP11CQ8NB49 1132 aa15.82■□□□□ 0.12
SS18-216ENST00000580751 TSTD1Q8NFU3 115 aa15.82■□□□□ 0.12
SS18-216ENST00000580751 CASKIN2Q8WXE0 1202 aa15.82■□□□□ 0.12
SS18-216ENST00000580751 PRRX2Q99811 253 aa15.82■□□□□ 0.12
SS18-216ENST00000580751 FBRSQ9HAH7 460 aa15.82■□□□□ 0.12
SS18-216ENST00000580751 SUN2Q9UH99 717 aa15.82■□□□□ 0.12
SS18-216ENST00000580751 SLCO3A1Q9UIG8 710 aa15.82■□□□□ 0.12
SS18-216ENST00000580751 FBXO4Q9UKT5 387 aa15.82■□□□□ 0.12
SS18-216ENST00000580751 RAD54BQ9Y620 910 aa15.82■□□□□ 0.12
SS18-216ENST00000580751 EDDM13A0A1B0GTR0 161 aa15.81■□□□□ 0.12
SS18-216ENST00000580751 WASH3PC4AMC7 463 aa15.81■□□□□ 0.12
SS18-216ENST00000580751 ZBTB24O43167 697 aaPredicted RBP15.81■□□□□ 0.12
SS18-216ENST00000580751 GALR2O43603 387 aaPredicted RBP15.81■□□□□ 0.12
SS18-216ENST00000580751 PRAMEF11O60813 436 aa15.81■□□□□ 0.12
SS18-216ENST00000580751 ALDH1A2O94788 518 aa15.81■□□□□ 0.12
SS18-216ENST00000580751 APBB3O95704 486 aa15.81■□□□□ 0.12
SS18-216ENST00000580751 SRCP12931 536 aa15.81■□□□□ 0.12
SS18-216ENST00000580751 HLA-EP13747 358 aa15.81■□□□□ 0.12
SS18-216ENST00000580751 MX2P20592 715 aa15.81■□□□□ 0.12
SS18-216ENST00000580751 FNTAP49354 379 aa15.81■□□□□ 0.12
SS18-216ENST00000580751 CKAP5Q14008 2032 aa15.81■□□□□ 0.12
SS18-216ENST00000580751 MUC6Q6W4X9 2439 aa15.81■□□□□ 0.12
SS18-216ENST00000580751 PLD5Q8N7P1 536 aa15.81■□□□□ 0.12
SS18-216ENST00000580751 CEP44Q9C0F1 390 aa15.81■□□□□ 0.12
SS18-216ENST00000580751 SP110Q9HB58 689 aa15.81■□□□□ 0.12
SS18-216ENST00000580751 C2orf42Q9NWW7 574 aa15.81■□□□□ 0.12
SS18-216ENST00000580751 IPO11Q9UI26 975 aaKnown RBP15.81■□□□□ 0.12
SS18-216ENST00000580751 NUP205Q92621 2012 aa15.8■□□□□ 0.12
SS18-216ENST00000580751 A0A1W2PQF6 199 aa15.8■□□□□ 0.12
SS18-216ENST00000580751 TCRBV21S2A2A0A5A6 115 aa15.8■□□□□ 0.12
SS18-216ENST00000580751 TARSL2A2RTX5 802 aaKnown RBP15.8■□□□□ 0.12
SS18-216ENST00000580751 TTC34A8MYJ7 566 aa15.8■□□□□ 0.12
SS18-216ENST00000580751 APOC4-APOC2K7ER74 178 aa15.8■□□□□ 0.12
SS18-216ENST00000580751 MT-CO1P00395 513 aa15.8■□□□□ 0.12
SS18-216ENST00000580751 APOC2P02655 101 aa15.8■□□□□ 0.12
SS18-216ENST00000580751 TUBBP07437 444 aa15.8■□□□□ 0.12
SS18-216ENST00000580751 HOXA6P31267 233 aa15.8■□□□□ 0.12
SS18-216ENST00000580751 DYNLT1P63172 113 aa15.8■□□□□ 0.12
SS18-216ENST00000580751 LMNB2Q03252 620 aa15.8■□□□□ 0.12
SS18-216ENST00000580751 GBE1Q04446 702 aa15.8■□□□□ 0.12
SS18-216ENST00000580751 IL10RBQ08334 325 aa15.8■□□□□ 0.12
SS18-216ENST00000580751 GALNT2Q10471 571 aa15.8■□□□□ 0.12
SS18-216ENST00000580751 CAMK2GQ13555 558 aaPredicted RBP15.8■□□□□ 0.12
SS18-216ENST00000580751 DLG2Q15700 870 aa15.8■□□□□ 0.12
SS18-216ENST00000580751 ACCSLQ4AC99 568 aa15.8■□□□□ 0.12
SS18-216ENST00000580751 INO80DQ53TQ3 878 aaPredicted RBP15.8■□□□□ 0.12
SS18-216ENST00000580751 KAZNQ674X7 775 aa15.8■□□□□ 0.12
SS18-216ENST00000580751 C22orf39Q6P5X5 142 aa15.8■□□□□ 0.12
SS18-216ENST00000580751 TMEM92Q6UXU6 159 aa15.8■□□□□ 0.12
SS18-216ENST00000580751 MAATS1Q7Z4T9 603 aa15.8■□□□□ 0.12
SS18-216ENST00000580751 PCDH20Q8N6Y1 951 aaKnown RBP15.8■□□□□ 0.12
SS18-216ENST00000580751 ZNF366Q8N895 744 aa15.8■□□□□ 0.12
SS18-216ENST00000580751 CCDC114Q96M63 670 aa15.8■□□□□ 0.12
SS18-216ENST00000580751 HHIPQ96QV1 700 aa15.8■□□□□ 0.12
SS18-216ENST00000580751 PDFQ9HBH1 243 aa15.8■□□□□ 0.12
SS18-216ENST00000580751 UBA2Q9UBT2 640 aaPredicted RBP15.8■□□□□ 0.12
SS18-216ENST00000580751 K7ESF4 209 aa15.79■□□□□ 0.12
SS18-216ENST00000580751 CST8O60676 142 aa15.79■□□□□ 0.12
SS18-216ENST00000580751 PHF2O75151 1096 aa15.79■□□□□ 0.12
SS18-216ENST00000580751 KRT10P13645 584 aa15.79■□□□□ 0.12
SS18-216ENST00000580751 COL9A1P20849 921 aa15.79■□□□□ 0.12
SS18-216ENST00000580751 GARSP41250 739 aaKnown RBP15.79■□□□□ 0.12
SS18-216ENST00000580751 ELAVL3Q14576 367 aaKnown RBP15.79■□□□□ 0.12
SS18-216ENST00000580751 ANGPT1Q15389 498 aa15.79■□□□□ 0.12
SS18-216ENST00000580751 SIX1Q15475 284 aaPredicted RBP15.79■□□□□ 0.12
SS18-216ENST00000580751 KIAA1211LQ6NV74 962 aa15.79■□□□□ 0.12
SS18-216ENST00000580751 AADACL2Q6P093 401 aa15.79■□□□□ 0.12
SS18-216ENST00000580751 SYDE1Q6ZW31 735 aaPredicted RBP15.79■□□□□ 0.12
SS18-216ENST00000580751 PRELID2Q8N945 189 aa15.79■□□□□ 0.12
SS18-216ENST00000580751 NETO2Q8NC67 525 aa15.79■□□□□ 0.12
SS18-216ENST00000580751 MYRIPQ8NFW9 859 aa15.79■□□□□ 0.12
SS18-216ENST00000580751 OR2T3Q8NH03 318 aa15.79■□□□□ 0.12
SS18-216ENST00000580751 FRS2Q8WU20 508 aa15.79■□□□□ 0.12
SS18-216ENST00000580751 NSMCE1Q8WV22 266 aa15.79■□□□□ 0.12
SS18-216ENST00000580751 RUBCNQ92622 972 aa15.79■□□□□ 0.12
SS18-216ENST00000580751 SLCO2A1Q92959 643 aa15.79■□□□□ 0.12
SS18-216ENST00000580751 NKD2Q969F2 451 aaPredicted RBP15.79■□□□□ 0.12
SS18-216ENST00000580751 ISG20Q96AZ6 181 aaKnown RBP15.79■□□□□ 0.12
SS18-216ENST00000580751 ZNF599Q96NL3 588 aa15.79■□□□□ 0.12
SS18-216ENST00000580751 HEMGNQ9BXL5 484 aa15.79■□□□□ 0.12
SS18-216ENST00000580751 FAM126AQ9BYI3 521 aaPredicted RBP15.79■□□□□ 0.12
SS18-216ENST00000580751 BRD8Q9H0E9 1235 aa15.79■□□□□ 0.12
SS18-216ENST00000580751 CD248Q9HCU0 757 aa15.79■□□□□ 0.12
SS18-216ENST00000580751 PRSS16Q9NQE7 514 aa15.79■□□□□ 0.12
SS18-216ENST00000580751 POLR3BQ9NW08 1133 aaPredicted RBP15.79■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms