RNA–Protein interactions for RNA: ENST00000580222.5

LIMD2-209, Transcript of LIM domain containing 2, humanhuman

TSL 3

Gene LIMD2, Length 846 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2-209ENST00000580222 SYT11Q9BT88 431 aa19.9■□□□□ 0.78
LIMD2-209ENST00000580222 DEF6Q9H4E7 631 aa19.9■□□□□ 0.78
LIMD2-209ENST00000580222 STIM2Q9P246 746 aa19.9■□□□□ 0.78
LIMD2-209ENST00000580222 CYTH4Q9UIA0 394 aa19.9■□□□□ 0.78
LIMD2-209ENST00000580222 SLCO3A1Q9UIG8 710 aa19.9■□□□□ 0.78
LIMD2-209ENST00000580222 TBC1D3DA0A087WVF3 549 aa19.89■□□□□ 0.77
LIMD2-209ENST00000580222 TBC1D3IA0A087WXS9 549 aa19.89■□□□□ 0.77
LIMD2-209ENST00000580222 TBC1D3EA0A087X179 549 aa19.89■□□□□ 0.77
LIMD2-209ENST00000580222 TBC1D3KA0A087X1G2 549 aa19.89■□□□□ 0.77
LIMD2-209ENST00000580222 LY6G6EA0A0G2JKS1 128 aa19.89■□□□□ 0.77
LIMD2-209ENST00000580222 TBC1D3FA6NER0 549 aaPredicted RBP19.89■□□□□ 0.77
LIMD2-209ENST00000580222 TBC1D3LB9A6J9 549 aa19.89■□□□□ 0.77
LIMD2-209ENST00000580222 PIK3R2O00459 728 aa19.89■□□□□ 0.77
LIMD2-209ENST00000580222 RNASEH1O60930 286 aaKnown RBP19.89■□□□□ 0.77
LIMD2-209ENST00000580222 CYP1A1P04798 512 aaPredicted RBP19.89■□□□□ 0.77
LIMD2-209ENST00000580222 PLEKP08567 350 aaPredicted RBP19.89■□□□□ 0.77
LIMD2-209ENST00000580222 TBC1D3HP0C7X1 549 aa19.89■□□□□ 0.77
LIMD2-209ENST00000580222 LCP1P13796 627 aa19.89■□□□□ 0.77
LIMD2-209ENST00000580222 DGKAP23743 735 aa19.89■□□□□ 0.77
LIMD2-209ENST00000580222 DRD3P35462 400 aa19.89■□□□□ 0.77
LIMD2-209ENST00000580222 ACADSBP45954 432 aa19.89■□□□□ 0.77
LIMD2-209ENST00000580222 TKTL1P51854 596 aa19.89■□□□□ 0.77
LIMD2-209ENST00000580222 SKOR1P84550 965 aa19.89■□□□□ 0.77
LIMD2-209ENST00000580222 CLEC16AQ2KHT3 1053 aa19.89■□□□□ 0.77
LIMD2-209ENST00000580222 FAM133BQ5BKY9 247 aaKnown RBP19.89■□□□□ 0.77
LIMD2-209ENST00000580222 FSCBQ5H9T9 825 aa19.89■□□□□ 0.77
LIMD2-209ENST00000580222 TBC1D3GQ6DHY5 549 aa19.89■□□□□ 0.77
LIMD2-209ENST00000580222 TBC1D3CQ6IPX1 549 aa19.89■□□□□ 0.77
LIMD2-209ENST00000580222 TBC1D3Q8IZP1 549 aaPredicted RBP19.89■□□□□ 0.77
LIMD2-209ENST00000580222 LSMEM2Q8N112 164 aa19.89■□□□□ 0.77
LIMD2-209ENST00000580222 WDTC1Q8N5D0 677 aa19.89■□□□□ 0.77
LIMD2-209ENST00000580222 MSANTD4Q8NCY6 345 aa19.89■□□□□ 0.77
LIMD2-209ENST00000580222 STK32AQ8WU08 396 aa19.89■□□□□ 0.77
LIMD2-209ENST00000580222 PCDHB18PQ96TA0 734 aa19.89■□□□□ 0.77
LIMD2-209ENST00000580222 SYNCQ9H7C4 482 aa19.89■□□□□ 0.77
LIMD2-209ENST00000580222 HBS1LQ9Y450 684 aaKnown RBP19.89■□□□□ 0.77
LIMD2-209ENST00000580222 U3KQA8 63 aa19.89■□□□□ 0.77
LIMD2-209ENST00000580222 FFAR2O15552 330 aa19.88■□□□□ 0.77
LIMD2-209ENST00000580222 EFSO43281 561 aa19.88■□□□□ 0.77
LIMD2-209ENST00000580222 ZBED1O96006 694 aa19.88■□□□□ 0.77
LIMD2-209ENST00000580222 NSFP46459 744 aaKnown RBP19.88■□□□□ 0.77
LIMD2-209ENST00000580222 GSDMDP57764 484 aa19.88■□□□□ 0.77
LIMD2-209ENST00000580222 DAB2P98082 770 aa19.88■□□□□ 0.77
LIMD2-209ENST00000580222 SLC45A4Q5BKX6 768 aa19.88■□□□□ 0.77
LIMD2-209ENST00000580222 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP19.88■□□□□ 0.77
LIMD2-209ENST00000580222 SND1Q7KZF4 910 aaKnown RBP eCLIP19.88■□□□□ 0.77
LIMD2-209ENST00000580222 OR4C6Q8NH72 309 aa19.88■□□□□ 0.77
LIMD2-209ENST00000580222 CPA5Q8WXQ8 436 aa19.88■□□□□ 0.77
LIMD2-209ENST00000580222 PRR11Q96HE9 360 aaPredicted RBP19.88■□□□□ 0.77
LIMD2-209ENST00000580222 PPP1R13BQ96KQ4 1090 aa19.88■□□□□ 0.77
LIMD2-209ENST00000580222 PANX2Q96RD6 677 aa19.88■□□□□ 0.77
LIMD2-209ENST00000580222 SLC4A5Q9BY07 1137 aa19.88■□□□□ 0.77
LIMD2-209ENST00000580222 ERVW-1Q9UQF0 538 aa19.88■□□□□ 0.77
LIMD2-209ENST00000580222 E5RJQ4 531 aa19.87■□□□□ 0.77
LIMD2-209ENST00000580222 TERTO14746 1132 aaKnown RBP19.87■□□□□ 0.77
LIMD2-209ENST00000580222 RTN2O75298 545 aa19.87■□□□□ 0.77
LIMD2-209ENST00000580222 CKMT1AP12532 417 aa19.87■□□□□ 0.77
LIMD2-209ENST00000580222 VAV1P15498 845 aa19.87■□□□□ 0.77
LIMD2-209ENST00000580222 EIF4A3P38919 411 aaKnown RBP19.87■□□□□ 0.77
LIMD2-209ENST00000580222 NUMBP49757 651 aa19.87■□□□□ 0.77
LIMD2-209ENST00000580222 SNX16P57768 344 aa19.87■□□□□ 0.77
LIMD2-209ENST00000580222 ST8SIA6P61647 398 aa19.87■□□□□ 0.77
LIMD2-209ENST00000580222 POM121L1PQ3SYA9 428 aa19.87■□□□□ 0.77
LIMD2-209ENST00000580222 PTPN20Q4JDL3 420 aa19.87■□□□□ 0.77
LIMD2-209ENST00000580222 NADSYN1Q6IA69 706 aa19.87■□□□□ 0.77
LIMD2-209ENST00000580222 FIBINQ8TAL6 211 aa19.87■□□□□ 0.77
LIMD2-209ENST00000580222 PRICKLE1Q96MT3 831 aaPredicted RBP19.87■□□□□ 0.77
LIMD2-209ENST00000580222 DEPDC7Q96QD5 511 aa19.87■□□□□ 0.77
LIMD2-209ENST00000580222 CPXM1Q96SM3 734 aa19.87■□□□□ 0.77
LIMD2-209ENST00000580222 MIS12Q9H081 205 aa19.87■□□□□ 0.77
LIMD2-209ENST00000580222 SATB2Q9UPW6 733 aa19.87■□□□□ 0.77
LIMD2-209ENST00000580222 SSU72P8A0A1W2PR75 194 aa19.86■□□□□ 0.77
LIMD2-209ENST00000580222 TARSL2A2RTX5 802 aaKnown RBP19.86■□□□□ 0.77
LIMD2-209ENST00000580222 YJEFN3A6XGL0 299 aa19.86■□□□□ 0.77
LIMD2-209ENST00000580222 E7ENQ6 273 aa19.86■□□□□ 0.77
LIMD2-209ENST00000580222 DDX3XO00571 662 aaKnown RBP eCLIP19.86■□□□□ 0.77
LIMD2-209ENST00000580222 UNGP13051 313 aaPredicted RBP19.86■□□□□ 0.77
LIMD2-209ENST00000580222 RPS24P62847 133 aaKnown RBP19.86■□□□□ 0.77
LIMD2-209ENST00000580222 CENPCQ03188 943 aa19.86■□□□□ 0.77
LIMD2-209ENST00000580222 MAPK8IP2Q13387 824 aaPredicted RBP19.86■□□□□ 0.77
LIMD2-209ENST00000580222 LINC00303Q3SY05 128 aa19.86■□□□□ 0.77
LIMD2-209ENST00000580222 MPP7Q5T2T1 576 aa19.86■□□□□ 0.77
LIMD2-209ENST00000580222 BSPRYQ5W0U4 402 aa19.86■□□□□ 0.77
LIMD2-209ENST00000580222 IQCHQ86VS3 1027 aa19.86■□□□□ 0.77
LIMD2-209ENST00000580222 MFN1Q8IWA4 741 aa19.86■□□□□ 0.77
LIMD2-209ENST00000580222 SLC30A5Q8TAD4 765 aa19.86■□□□□ 0.77
LIMD2-209ENST00000580222 PTPRN2Q92932 1015 aa19.86■□□□□ 0.77
LIMD2-209ENST00000580222 CHP1Q99653 195 aa19.86■□□□□ 0.77
LIMD2-209ENST00000580222 C11orf70Q9BRQ4 267 aa19.86■□□□□ 0.77
LIMD2-209ENST00000580222 CNGB3Q9NQW8 809 aa19.86■□□□□ 0.77
LIMD2-209ENST00000580222 THSD1Q9NS62 852 aa19.86■□□□□ 0.77
LIMD2-209ENST00000580222 TJP2Q9UDY2 1190 aa19.86■□□□□ 0.77
LIMD2-209ENST00000580222 RELNP78509 3460 aa19.85■□□□□ 0.77
LIMD2-209ENST00000580222 TMCO5BA8MYB1 307 aa19.85■□□□□ 0.77
LIMD2-209ENST00000580222 CASC3O15234 703 aaKnown RBP19.85■□□□□ 0.77
LIMD2-209ENST00000580222 FBXO21O94952 628 aa19.85■□□□□ 0.77
LIMD2-209ENST00000580222 LATS1O95835 1130 aa19.85■□□□□ 0.77
LIMD2-209ENST00000580222 ERBB2P04626 1255 aa19.85■□□□□ 0.77
LIMD2-209ENST00000580222 C5AR1P21730 350 aa19.85■□□□□ 0.77
LIMD2-209ENST00000580222 MZF1P28698 734 aaPredicted RBP19.85■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms