RNA–Protein interactions for RNA: ENST00000573584.5

NUP88-207, Transcript of nucleoporin 88, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP88, Length 2,916 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-207ENST00000573584 ANLNQ9NQW6 1124 aa15.89■□□□□ 0.13
NUP88-207ENST00000573584 APPL1Q9UKG1 709 aa15.89■□□□□ 0.13
NUP88-207ENST00000573584 ZNF189O75820 626 aaPredicted RBP15.89■□□□□ 0.13
NUP88-207ENST00000573584 CYP2C9P11712 490 aa15.89■□□□□ 0.13
NUP88-207ENST00000573584 ADCYAP1R1P41586 468 aa15.89■□□□□ 0.13
NUP88-207ENST00000573584 DPP6P42658 865 aa15.89■□□□□ 0.13
NUP88-207ENST00000573584 TAF6P49848 677 aa15.89■□□□□ 0.13
NUP88-207ENST00000573584 ITPRIPL1Q6GPH6 555 aa15.89■□□□□ 0.13
NUP88-207ENST00000573584 FSTL5Q8N475 847 aaPredicted RBP15.89■□□□□ 0.13
NUP88-207ENST00000573584 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP15.89■□□□□ 0.13
NUP88-207ENST00000573584 KCTD4Q8WVF5 259 aa15.89■□□□□ 0.13
NUP88-207ENST00000573584 HIC2Q96JB3 615 aa15.89■□□□□ 0.13
NUP88-207ENST00000573584 MPP4Q96JB8 637 aa15.89■□□□□ 0.13
NUP88-207ENST00000573584 SLC2A13Q96QE2 648 aa15.89■□□□□ 0.13
NUP88-207ENST00000573584 ADAMTS10Q9H324 1103 aa15.89■□□□□ 0.13
NUP88-207ENST00000573584 ZBTB26Q9HCK0 441 aa15.89■□□□□ 0.13
NUP88-207ENST00000573584 TRHDEQ9UKU6 1024 aa15.89■□□□□ 0.13
NUP88-207ENST00000573584 GNEQ9Y223 722 aaKnown RBP15.89■□□□□ 0.13
NUP88-207ENST00000573584 RAD54BQ9Y620 910 aa15.89■□□□□ 0.13
NUP88-207ENST00000573584 I6L893 689 aaPredicted RBP15.88■□□□□ 0.13
NUP88-207ENST00000573584 CXCL11O14625 94 aa15.88■□□□□ 0.13
NUP88-207ENST00000573584 GK3PQ14409 553 aa15.88■□□□□ 0.13
NUP88-207ENST00000573584 GALNT4Q8N4A0 578 aa15.88■□□□□ 0.13
NUP88-207ENST00000573584 STYXQ8WUJ0 223 aa15.88■□□□□ 0.13
NUP88-207ENST00000573584 PKP2Q99959 881 aa15.88■□□□□ 0.13
NUP88-207ENST00000573584 RHOJQ9H4E5 214 aa15.88■□□□□ 0.13
NUP88-207ENST00000573584 VILLO15195 856 aa15.88■□□□□ 0.13
NUP88-207ENST00000573584 MTSS1O43312 755 aa15.88■□□□□ 0.13
NUP88-207ENST00000573584 TADA2AO75478 443 aa15.88■□□□□ 0.13
NUP88-207ENST00000573584 SLC35E2BP0CK96 405 aa15.88■□□□□ 0.13
NUP88-207ENST00000573584 ATP6V1B1P15313 513 aa15.88■□□□□ 0.13
NUP88-207ENST00000573584 TCN1P20061 433 aaPredicted RBP15.88■□□□□ 0.13
NUP88-207ENST00000573584 PNPLA4P41247 253 aa15.88■□□□□ 0.13
NUP88-207ENST00000573584 CSRP3P50461 194 aa15.88■□□□□ 0.13
NUP88-207ENST00000573584 TKTL1P51854 596 aa15.88■□□□□ 0.13
NUP88-207ENST00000573584 SLC12A1Q13621 1099 aa15.88■□□□□ 0.13
NUP88-207ENST00000573584 OSTM1Q86WC4 334 aa15.88■□□□□ 0.13
NUP88-207ENST00000573584 ERO1BQ86YB8 467 aa15.88■□□□□ 0.13
NUP88-207ENST00000573584 TICAM1Q8IUC6 712 aa15.88■□□□□ 0.13
NUP88-207ENST00000573584 LSMEM2Q8N112 164 aa15.88■□□□□ 0.13
NUP88-207ENST00000573584 PDCD6IPQ8WUM4 868 aaKnown RBP15.88■□□□□ 0.13
NUP88-207ENST00000573584 EZH1Q92800 747 aaPredicted RBP15.88■□□□□ 0.13
NUP88-207ENST00000573584 TMA16Q96EY4 203 aaKnown RBP15.88■□□□□ 0.13
NUP88-207ENST00000573584 SLC9A7Q96T83 725 aa15.88■□□□□ 0.13
NUP88-207ENST00000573584 OSMRQ99650 979 aa15.88■□□□□ 0.13
NUP88-207ENST00000573584 OCEL1Q9H607 264 aa15.88■□□□□ 0.13
NUP88-207ENST00000573584 CCDC160A6NGH7 325 aa15.88■□□□□ 0.13
NUP88-207ENST00000573584 NRP1O14786 923 aa15.88■□□□□ 0.13
NUP88-207ENST00000573584 BCAS2O75934 225 aaPredicted RBP15.88■□□□□ 0.13
NUP88-207ENST00000573584 TNFAIP8O95379 198 aa15.88■□□□□ 0.13
NUP88-207ENST00000573584 FYNP06241 537 aa15.88■□□□□ 0.13
NUP88-207ENST00000573584 NSUN2Q08J23 767 aaKnown RBP eCLIP15.88■□□□□ 0.13
NUP88-207ENST00000573584 CDH17Q12864 832 aa15.88■□□□□ 0.13
NUP88-207ENST00000573584 HERC3Q15034 1050 aa15.88■□□□□ 0.13
NUP88-207ENST00000573584 NADK2Q4G0N4 442 aa15.88■□□□□ 0.13
NUP88-207ENST00000573584 C6orf52Q5T4I8 152 aa15.88■□□□□ 0.13
NUP88-207ENST00000573584 IYDQ6PHW0 289 aa15.88■□□□□ 0.13
NUP88-207ENST00000573584 CCNYL1Q8N7R7 359 aa15.88■□□□□ 0.13
NUP88-207ENST00000573584 B4GALNT2Q8NHY0 566 aa15.88■□□□□ 0.13
NUP88-207ENST00000573584 DLG3Q92796 817 aa15.88■□□□□ 0.13
NUP88-207ENST00000573584 NPAS2Q99743 824 aa15.88■□□□□ 0.13
NUP88-207ENST00000573584 WDR6Q9NNW5 1121 aaKnown RBP15.88■□□□□ 0.13
NUP88-207ENST00000573584 NSMCE4AQ9NXX6 385 aa15.88■□□□□ 0.13
NUP88-207ENST00000573584 COPG1Q9Y678 874 aaKnown RBP15.88■□□□□ 0.13
NUP88-207ENST00000573584 DLX3O60479 287 aa15.87■□□□□ 0.13
NUP88-207ENST00000573584 JCHAINP01591 159 aa15.87■□□□□ 0.13
NUP88-207ENST00000573584 AHSGP02765 367 aa15.87■□□□□ 0.13
NUP88-207ENST00000573584 IREB2P48200 963 aaKnown RBP15.87■□□□□ 0.13
NUP88-207ENST00000573584 RABGGTBP53611 331 aa15.87■□□□□ 0.13
NUP88-207ENST00000573584 MAP3K7CLP57077 242 aa15.87■□□□□ 0.13
NUP88-207ENST00000573584 SEMA3BQ13214 749 aa15.87■□□□□ 0.13
NUP88-207ENST00000573584 PAQR9Q6ZVX9 377 aa15.87■□□□□ 0.13
NUP88-207ENST00000573584 DEFB132Q7Z7B7 95 aa15.87■□□□□ 0.13
NUP88-207ENST00000573584 SLC41A1Q8IVJ1 513 aa15.87■□□□□ 0.13
NUP88-207ENST00000573584 SULF1Q8IWU6 871 aa15.87■□□□□ 0.13
NUP88-207ENST00000573584 CENPLQ8N0S6 344 aaPredicted RBP15.87■□□□□ 0.13
NUP88-207ENST00000573584 AHI1Q8N157 1196 aa15.87■□□□□ 0.13
NUP88-207ENST00000573584 METTL25Q8N6Q8 603 aa15.87■□□□□ 0.13
NUP88-207ENST00000573584 KCTD13Q8WZ19 329 aa15.87■□□□□ 0.13
NUP88-207ENST00000573584 HDAC11Q96DB2 347 aa15.87■□□□□ 0.13
NUP88-207ENST00000573584 PRPF18Q99633 342 aaKnown RBP15.87■□□□□ 0.13
NUP88-207ENST00000573584 MED10Q9BTT4 135 aa15.87■□□□□ 0.13
NUP88-207ENST00000573584 GRIP2Q9C0E4 1043 aa15.87■□□□□ 0.13
NUP88-207ENST00000573584 BRD8Q9H0E9 1235 aa15.87■□□□□ 0.13
NUP88-207ENST00000573584 ACOT9Q9Y305 439 aa15.87■□□□□ 0.13
NUP88-207ENST00000573584 PAPPA2Q9BXP8 1791 aa15.87■□□□□ 0.13
NUP88-207ENST00000573584 ADM5C9JUS6 153 aa15.87■□□□□ 0.13
NUP88-207ENST00000573584 GABRB3P28472 473 aa15.87■□□□□ 0.13
NUP88-207ENST00000573584 AIF1P55008 147 aa15.87■□□□□ 0.13
NUP88-207ENST00000573584 CCNA1P78396 465 aa15.87■□□□□ 0.13
NUP88-207ENST00000573584 MYBPC1Q00872 1141 aa15.87■□□□□ 0.13
NUP88-207ENST00000573584 SOX4Q06945 474 aaPredicted RBP15.87■□□□□ 0.13
NUP88-207ENST00000573584 TTLL12Q14166 644 aaPredicted RBP15.87■□□□□ 0.13
NUP88-207ENST00000573584 SV2CQ496J9 727 aa15.87■□□□□ 0.13
NUP88-207ENST00000573584 CLEC20AQ6ZU45 233 aa15.87■□□□□ 0.13
NUP88-207ENST00000573584 SPATA6LQ8N4H0 392 aa15.87■□□□□ 0.13
NUP88-207ENST00000573584 NTAN1Q96AB6 310 aa15.87■□□□□ 0.13
NUP88-207ENST00000573584 ZFRQ96KR1 1074 aaKnown RBP15.87■□□□□ 0.13
NUP88-207ENST00000573584 KLHL32Q96NJ5 620 aa15.87■□□□□ 0.13
NUP88-207ENST00000573584 MRPS26Q9BYN8 205 aaKnown RBP15.87■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 79.3 ms