RNA–Protein interactions for RNA: ENST00000569122.1

SMG1-216, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 562 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-216ENST00000569122 POLE2P56282 527 aa8.88□□□□□ -0.99
SMG1-216ENST00000569122 STK38Q15208 465 aa8.88□□□□□ -0.99
SMG1-216ENST00000569122 ELOCQ15369 112 aa8.88□□□□□ -0.99
SMG1-216ENST00000569122 STILQ15468 1287 aa8.88□□□□□ -0.99
SMG1-216ENST00000569122 TMEM259Q4ZIN3 620 aa8.88□□□□□ -0.99
SMG1-216ENST00000569122 PRRT3Q5FWE3 981 aa8.88□□□□□ -0.99
SMG1-216ENST00000569122 OR6B2Q6IFH4 312 aa8.88□□□□□ -0.99
SMG1-216ENST00000569122 DTX1Q86Y01 620 aa8.88□□□□□ -0.99
SMG1-216ENST00000569122 SLC35F3Q8IY50 421 aa8.88□□□□□ -0.99
SMG1-216ENST00000569122 CCAR2Q8N163 923 aaKnown RBP8.88□□□□□ -0.99
SMG1-216ENST00000569122 FSTL5Q8N475 847 aaPredicted RBP8.88□□□□□ -0.99
SMG1-216ENST00000569122 SH2D3CQ8N5H7 860 aa8.88□□□□□ -0.99
SMG1-216ENST00000569122 ARL10Q8N8L6 244 aa8.88□□□□□ -0.99
SMG1-216ENST00000569122 FBXL13Q8NEE6 735 aa8.88□□□□□ -0.99
SMG1-216ENST00000569122 DENND6BQ8NEG7 585 aa8.88□□□□□ -0.99
SMG1-216ENST00000569122 ASB12Q8WXK4 309 aa8.88□□□□□ -0.99
SMG1-216ENST00000569122 SLC39A13Q96H72 371 aa8.88□□□□□ -0.99
SMG1-216ENST00000569122 FCRL2Q96LA5 508 aaPredicted RBP8.88□□□□□ -0.99
SMG1-216ENST00000569122 EPAS1Q99814 870 aa8.88□□□□□ -0.99
SMG1-216ENST00000569122 ZSCAN16Q9H4T2 348 aaPredicted RBP8.88□□□□□ -0.99
SMG1-216ENST00000569122 EXOC1Q9NV70 894 aa8.88□□□□□ -0.99
SMG1-216ENST00000569122 SLTMQ9NWH9 1034 aaKnown RBP eCLIP8.88□□□□□ -0.99
SMG1-216ENST00000569122 RAB20Q9NX57 234 aa8.88□□□□□ -0.99
SMG1-216ENST00000569122 PLEKHB1Q9UF11 243 aaPredicted RBP8.88□□□□□ -0.99
SMG1-216ENST00000569122 USP9YO00507 2555 aaPredicted RBP8.88□□□□□ -0.99
SMG1-216ENST00000569122 BSNQ9UPA5 3926 aa8.87□□□□□ -0.99
SMG1-216ENST00000569122 PMS2P1A4D2B8 440 aa8.87□□□□□ -0.99
SMG1-216ENST00000569122 POM121BA6NF01 834 aa8.87□□□□□ -0.99
SMG1-216ENST00000569122 TULP2O00295 520 aa8.87□□□□□ -0.99
SMG1-216ENST00000569122 SPTLC2O15270 562 aa8.87□□□□□ -0.99
SMG1-216ENST00000569122 YY2O15391 372 aa8.87□□□□□ -0.99
SMG1-216ENST00000569122 ZW10O43264 779 aa8.87□□□□□ -0.99
SMG1-216ENST00000569122 AP1G1O43747 822 aa8.87□□□□□ -0.99
SMG1-216ENST00000569122 PPP6R2O75170 966 aa8.87□□□□□ -0.99
SMG1-216ENST00000569122 NEK3P51956 506 aa8.87□□□□□ -0.99
SMG1-216ENST00000569122 RIPPLY3P57055 190 aa8.87□□□□□ -0.99
SMG1-216ENST00000569122 YPEL5P62699 121 aa8.87□□□□□ -0.99
SMG1-216ENST00000569122 SEPT6Q14141 434 aa8.87□□□□□ -0.99
SMG1-216ENST00000569122 FGL2Q14314 439 aa8.87□□□□□ -0.99
SMG1-216ENST00000569122 NFIL3Q16649 462 aa8.87□□□□□ -0.99
SMG1-216ENST00000569122 C1orf220Q5T0J3 134 aa8.87□□□□□ -0.99
SMG1-216ENST00000569122 FHL5Q5TD97 284 aa8.87□□□□□ -0.99
SMG1-216ENST00000569122 FAXCQ5TGI0 409 aa8.87□□□□□ -0.99
SMG1-216ENST00000569122 RAP1GAP2Q684P5 730 aa8.87□□□□□ -0.99
SMG1-216ENST00000569122 LCLAT1Q6UWP7 414 aa8.87□□□□□ -0.99
SMG1-216ENST00000569122 Q6ZVU0 165 aa8.87□□□□□ -0.99
SMG1-216ENST00000569122 FAM186BQ8IYM0 893 aa8.87□□□□□ -0.99
SMG1-216ENST00000569122 CEP57L1Q8IYX8 460 aa8.87□□□□□ -0.99
SMG1-216ENST00000569122 ATP11CQ8NB49 1132 aa8.87□□□□□ -0.99
SMG1-216ENST00000569122 C9orf43Q8TAL5 461 aaPredicted RBP8.87□□□□□ -0.99
SMG1-216ENST00000569122 UBA3Q8TBC4 463 aa8.87□□□□□ -0.99
SMG1-216ENST00000569122 DQX1Q8TE96 717 aaKnown RBP8.87□□□□□ -0.99
SMG1-216ENST00000569122 SLC35F5Q8WV83 523 aa8.87□□□□□ -0.99
SMG1-216ENST00000569122 RAB7BQ96AH8 199 aa8.87□□□□□ -0.99
SMG1-216ENST00000569122 HAPLN3Q96S86 360 aa8.87□□□□□ -0.99
SMG1-216ENST00000569122 FEM1AQ9BSK4 669 aa8.87□□□□□ -0.99
SMG1-216ENST00000569122 EFHD1Q9BUP0 239 aa8.87□□□□□ -0.99
SMG1-216ENST00000569122 C2orf49Q9BVC5 232 aaPredicted RBP8.87□□□□□ -0.99
SMG1-216ENST00000569122 C1QTNF7Q9BXJ2 289 aa8.87□□□□□ -0.99
SMG1-216ENST00000569122 CDH19Q9H159 772 aa8.87□□□□□ -0.99
SMG1-216ENST00000569122 KCTD10Q9H3F6 313 aa8.87□□□□□ -0.99
SMG1-216ENST00000569122 LRRN3Q9H3W5 708 aa8.87□□□□□ -0.99
SMG1-216ENST00000569122 GULP1Q9UBP9 304 aa8.87□□□□□ -0.99
SMG1-216ENST00000569122 VPS28Q9UK41 221 aa8.87□□□□□ -0.99
SMG1-216ENST00000569122 ZFR2Q9UPR6 939 aaKnown RBP8.87□□□□□ -0.99
SMG1-216ENST00000569122 TRAF3IP3Q9Y228 551 aa8.87□□□□□ -0.99
SMG1-216ENST00000569122 HS3ST2Q9Y278 367 aa8.87□□□□□ -0.99
SMG1-216ENST00000569122 PLXNA2O75051 1894 aa8.87□□□□□ -0.99
SMG1-216ENST00000569122 MYH10P35580 1976 aa8.86□□□□□ -0.99
SMG1-216ENST00000569122 PRAMEF33A0A0G2JMD5 474 aa8.86□□□□□ -0.99
SMG1-216ENST00000569122 ZNF891A8MT65 544 aaPredicted RBP8.86□□□□□ -0.99
SMG1-216ENST00000569122 KCNU1A8MYU2 1149 aa8.86□□□□□ -0.99
SMG1-216ENST00000569122 POLR2DO15514 142 aaKnown RBP8.86□□□□□ -0.99
SMG1-216ENST00000569122 TSPAN6O43657 245 aa8.86□□□□□ -0.99
SMG1-216ENST00000569122 PRAMEF10O60809 474 aa8.86□□□□□ -0.99
SMG1-216ENST00000569122 CLDN11O75508 207 aa8.86□□□□□ -0.99
SMG1-216ENST00000569122 RPLP0P05388 317 aaKnown RBP8.86□□□□□ -0.99
SMG1-216ENST00000569122 PAEPP09466 180 aa8.86□□□□□ -0.99
SMG1-216ENST00000569122 PNLIPP16233 465 aa8.86□□□□□ -0.99
SMG1-216ENST00000569122 NR2F2P24468 414 aa8.86□□□□□ -0.99
SMG1-216ENST00000569122 ACADSBP45954 432 aa8.86□□□□□ -0.99
SMG1-216ENST00000569122 CD97P48960 835 aa8.86□□□□□ -0.99
SMG1-216ENST00000569122 NASPP49321 788 aaPredicted RBP8.86□□□□□ -0.99
SMG1-216ENST00000569122 PFN3P60673 137 aa8.86□□□□□ -0.99
SMG1-216ENST00000569122 CYP4F2P78329 520 aa8.86□□□□□ -0.99
SMG1-216ENST00000569122 PPARDQ03181 441 aa8.86□□□□□ -0.99
SMG1-216ENST00000569122 CENPCQ03188 943 aa8.86□□□□□ -0.99
SMG1-216ENST00000569122 PPP3CAQ08209 521 aa8.86□□□□□ -0.99
SMG1-216ENST00000569122 SEL1L3Q68CR1 1132 aa8.86□□□□□ -0.99
SMG1-216ENST00000569122 B3GNT8Q7Z7M8 397 aa8.86□□□□□ -0.99
SMG1-216ENST00000569122 VASH2Q86V25 355 aa8.86□□□□□ -0.99
SMG1-216ENST00000569122 ZFAND4Q86XD8 727 aa8.86□□□□□ -0.99
SMG1-216ENST00000569122 GKN2Q86XP6 184 aa8.86□□□□□ -0.99
SMG1-216ENST00000569122 PHACTR4Q8IZ21 702 aa8.86□□□□□ -0.99
SMG1-216ENST00000569122 HTR3CQ8WXA8 447 aa8.86□□□□□ -0.99
SMG1-216ENST00000569122 USP7Q93009 1102 aa8.86□□□□□ -0.99
SMG1-216ENST00000569122 CCDC47Q96A33 483 aaKnown RBP8.86□□□□□ -0.99
SMG1-216ENST00000569122 ARHGEF26Q96DR7 871 aa8.86□□□□□ -0.99
SMG1-216ENST00000569122 MYEOVQ96EZ4 313 aa8.86□□□□□ -0.99
SMG1-216ENST00000569122 USP28Q96RU2 1077 aa8.86□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms