RNA–Protein interactions for RNA: ENST00000568949.1

SNX29-207, Transcript of sorting nexin 29, humanhuman

TSL 3

Gene SNX29, Length 636 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX29-207ENST00000568949 SLC4A5Q9BY07 1137 aa12.77□□□□□ -0.37
SNX29-207ENST00000568949 TRIM4Q9C037 500 aa12.77□□□□□ -0.37
SNX29-207ENST00000568949 ST7Q9NRC1 585 aa12.77□□□□□ -0.37
SNX29-207ENST00000568949 PCDHGA7Q9Y5G6 932 aa12.77□□□□□ -0.37
SNX29-207ENST00000568949 PMS2P1A4D2B8 440 aa12.76□□□□□ -0.37
SNX29-207ENST00000568949 POM121BA6NF01 834 aa12.76□□□□□ -0.37
SNX29-207ENST00000568949 PMM2O15305 246 aa12.76□□□□□ -0.37
SNX29-207ENST00000568949 CLDN11O75508 207 aa12.76□□□□□ -0.37
SNX29-207ENST00000568949 GJB6O95452 261 aa12.76□□□□□ -0.37
SNX29-207ENST00000568949 SFTPCP11686 197 aa12.76□□□□□ -0.37
SNX29-207ENST00000568949 SRCP12931 536 aa12.76□□□□□ -0.37
SNX29-207ENST00000568949 CCR1P32246 355 aa12.76□□□□□ -0.37
SNX29-207ENST00000568949 INHBCP55103 352 aa12.76□□□□□ -0.37
SNX29-207ENST00000568949 RPS21P63220 83 aaKnown RBP12.76□□□□□ -0.37
SNX29-207ENST00000568949 KRT83P78385 493 aa12.76□□□□□ -0.37
SNX29-207ENST00000568949 FKBP3Q00688 224 aaKnown RBP12.76□□□□□ -0.37
SNX29-207ENST00000568949 AUHQ13825 339 aaKnown RBP12.76□□□□□ -0.37
SNX29-207ENST00000568949 MEA1Q16626 185 aa12.76□□□□□ -0.37
SNX29-207ENST00000568949 COLEC12Q5KU26 742 aa12.76□□□□□ -0.37
SNX29-207ENST00000568949 C6orf132Q5T0Z8 1188 aa12.76□□□□□ -0.37
SNX29-207ENST00000568949 KIAA1161Q6NSJ0 714 aa12.76□□□□□ -0.37
SNX29-207ENST00000568949 FOXR1Q6PIV2 292 aa12.76□□□□□ -0.37
SNX29-207ENST00000568949 TMEM110Q86TL2 294 aa12.76□□□□□ -0.37
SNX29-207ENST00000568949 ZSCAN30Q86W11 494 aa12.76□□□□□ -0.37
SNX29-207ENST00000568949 PPM1KQ8N3J5 372 aa12.76□□□□□ -0.37
SNX29-207ENST00000568949 ATP11CQ8NB49 1132 aa12.76□□□□□ -0.37
SNX29-207ENST00000568949 BTN2A2Q8WVV5 523 aa12.76□□□□□ -0.37
SNX29-207ENST00000568949 GLMNQ92990 594 aa12.76□□□□□ -0.37
SNX29-207ENST00000568949 LIN37Q96GY3 246 aaPredicted RBP12.76□□□□□ -0.37
SNX29-207ENST00000568949 IL12RB2Q99665 862 aa12.76□□□□□ -0.37
SNX29-207ENST00000568949 BOCQ9BWV1 1114 aa12.76□□□□□ -0.37
SNX29-207ENST00000568949 SLC17A9Q9BYT1 436 aa12.76□□□□□ -0.37
SNX29-207ENST00000568949 THAP9Q9H5L6 903 aa12.76□□□□□ -0.37
SNX29-207ENST00000568949 ARMCX3Q9UH62 379 aaPredicted RBP12.76□□□□□ -0.37
SNX29-207ENST00000568949 ACSL6Q9UKU0 697 aa12.76□□□□□ -0.37
SNX29-207ENST00000568949 TBC1D30Q9Y2I9 924 aa12.76□□□□□ -0.37
SNX29-207ENST00000568949 UBR5O95071 2799 aaPredicted RBP12.76□□□□□ -0.37
SNX29-207ENST00000568949 SUV39H1O43463 412 aa12.75□□□□□ -0.37
SNX29-207ENST00000568949 MT-CO1P00395 513 aa12.75□□□□□ -0.37
SNX29-207ENST00000568949 CALCAP01258 141 aa12.75□□□□□ -0.37
SNX29-207ENST00000568949 NTRK1P04629 796 aa12.75□□□□□ -0.37
SNX29-207ENST00000568949 JUNDP17535 347 aa12.75□□□□□ -0.37
SNX29-207ENST00000568949 ITGB6P18564 788 aa12.75□□□□□ -0.37
SNX29-207ENST00000568949 FMO5P49326 533 aa12.75□□□□□ -0.37
SNX29-207ENST00000568949 CLCN6P51797 869 aa12.75□□□□□ -0.37
SNX29-207ENST00000568949 NDUFA8P51970 172 aa12.75□□□□□ -0.37
SNX29-207ENST00000568949 PDX1P52945 283 aa12.75□□□□□ -0.37
SNX29-207ENST00000568949 PITX1P78337 314 aaPredicted RBP12.75□□□□□ -0.37
SNX29-207ENST00000568949 CDK17Q00537 523 aa12.75□□□□□ -0.37
SNX29-207ENST00000568949 CENPCQ03188 943 aa12.75□□□□□ -0.37
SNX29-207ENST00000568949 EIF3IQ13347 325 aaKnown RBP12.75□□□□□ -0.37
SNX29-207ENST00000568949 FGL2Q14314 439 aa12.75□□□□□ -0.37
SNX29-207ENST00000568949 DEFB133Q30KQ1 61 aa12.75□□□□□ -0.37
SNX29-207ENST00000568949 C5orf22Q49AR2 442 aa12.75□□□□□ -0.37
SNX29-207ENST00000568949 PERM1Q5SV97 790 aa12.75□□□□□ -0.37
SNX29-207ENST00000568949 ZNF574Q6ZN55 896 aaPredicted RBP12.75□□□□□ -0.37
SNX29-207ENST00000568949 KRBA2Q6ZNG9 492 aa12.75□□□□□ -0.37
SNX29-207ENST00000568949 USP53Q70EK8 1073 aa12.75□□□□□ -0.37
SNX29-207ENST00000568949 LMX1AQ8TE12 382 aa12.75□□□□□ -0.37
SNX29-207ENST00000568949 KAT5Q92993 513 aa12.75□□□□□ -0.37
SNX29-207ENST00000568949 SGF29Q96ES7 293 aa12.75□□□□□ -0.37
SNX29-207ENST00000568949 PPP1R16AQ96I34 528 aa12.75□□□□□ -0.37
SNX29-207ENST00000568949 FEM1CQ96JP0 617 aa12.75□□□□□ -0.37
SNX29-207ENST00000568949 LENG8Q96PV6 779 aaPredicted RBP12.75□□□□□ -0.37
SNX29-207ENST00000568949 TSG101Q99816 390 aa12.75□□□□□ -0.37
SNX29-207ENST00000568949 SEMA3CQ99985 751 aa12.75□□□□□ -0.37
SNX29-207ENST00000568949 ARHGAP9Q9BRR9 750 aa12.75□□□□□ -0.37
SNX29-207ENST00000568949 C2orf49Q9BVC5 232 aaPredicted RBP12.75□□□□□ -0.37
SNX29-207ENST00000568949 FAM204AQ9H8W3 233 aa12.75□□□□□ -0.37
SNX29-207ENST00000568949 METTL14Q9HCE5 456 aaKnown RBP12.75□□□□□ -0.37
SNX29-207ENST00000568949 SPASTQ9UBP0 616 aa12.75□□□□□ -0.37
SNX29-207ENST00000568949 IPO11Q9UI26 975 aaKnown RBP12.75□□□□□ -0.37
SNX29-207ENST00000568949 KLF15Q9UIH9 416 aa12.75□□□□□ -0.37
SNX29-207ENST00000568949 VANGL2Q9ULK5 521 aa12.75□□□□□ -0.37
SNX29-207ENST00000568949 E5RJQ4 531 aa12.74□□□□□ -0.37
SNX29-207ENST00000568949 TMX2-CTNND1H3BSU7 103 aa12.74□□□□□ -0.37
SNX29-207ENST00000568949 FPGTO14772 594 aa12.74□□□□□ -0.37
SNX29-207ENST00000568949 MUSKO15146 869 aa12.74□□□□□ -0.37
SNX29-207ENST00000568949 RAD51BO15315 384 aa12.74□□□□□ -0.37
SNX29-207ENST00000568949 PAK4O96013 591 aaPredicted RBP12.74□□□□□ -0.37
SNX29-207ENST00000568949 GLI1P08151 1106 aa12.74□□□□□ -0.37
SNX29-207ENST00000568949 RECQLP46063 649 aaPredicted RBP12.74□□□□□ -0.37
SNX29-207ENST00000568949 IRAK1P51617 712 aa12.74□□□□□ -0.37
SNX29-207ENST00000568949 NEK3P51956 506 aa12.74□□□□□ -0.37
SNX29-207ENST00000568949 CDH4P55283 916 aa12.74□□□□□ -0.37
SNX29-207ENST00000568949 GCNT1Q02742 428 aa12.74□□□□□ -0.37
SNX29-207ENST00000568949 PDE1CQ14123 709 aaPredicted RBP12.74□□□□□ -0.37
SNX29-207ENST00000568949 SPIDRQ14159 915 aa12.74□□□□□ -0.37
SNX29-207ENST00000568949 ARSIQ5FYB1 569 aa12.74□□□□□ -0.37
SNX29-207ENST00000568949 DENND1BQ6P3S1 775 aa12.74□□□□□ -0.37
SNX29-207ENST00000568949 CRTC1Q6UUV9 634 aa12.74□□□□□ -0.37
SNX29-207ENST00000568949 SMYD4Q8IYR2 804 aaPredicted RBP12.74□□□□□ -0.37
SNX29-207ENST00000568949 CHST14Q8NCH0 376 aa12.74□□□□□ -0.37
SNX29-207ENST00000568949 ASB12Q8WXK4 309 aa12.74□□□□□ -0.37
SNX29-207ENST00000568949 TBATAQ96M53 351 aa12.74□□□□□ -0.37
SNX29-207ENST00000568949 PSMB7Q99436 277 aa12.74□□□□□ -0.37
SNX29-207ENST00000568949 MUC3BQ9H195 1237 aa12.74□□□□□ -0.37
SNX29-207ENST00000568949 DDIT4Q9NX09 232 aa12.74□□□□□ -0.37
SNX29-207ENST00000568949 IL36AQ9UHA7 158 aa12.74□□□□□ -0.37
SNX29-207ENST00000568949 VPS51Q9UID3 782 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms