RNA–Protein interactions for RNA: ENST00000567549.2

LINC01238-205, Transcript of long intergenic non-protein coding RNA 1238, humanhuman

BASIC

Gene LINC01238, Length 1,107 nt, Biotype antisense RNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01238-205ENST00000567549 TSC1Q92574 1164 aa19■□□□□ 0.63
LINC01238-205ENST00000567549 RAB7BQ96AH8 199 aa19■□□□□ 0.63
LINC01238-205ENST00000567549 ISG20Q96AZ6 181 aaKnown RBP19■□□□□ 0.63
LINC01238-205ENST00000567549 HEPHQ9BQS7 1158 aa19■□□□□ 0.63
LINC01238-205ENST00000567549 NAA15Q9BXJ9 866 aaKnown RBP19■□□□□ 0.63
LINC01238-205ENST00000567549 NRSN2Q9GZP1 204 aa19■□□□□ 0.63
LINC01238-205ENST00000567549 USP29Q9HBJ7 922 aa19■□□□□ 0.63
LINC01238-205ENST00000567549 KLHL11Q9NVR0 708 aa19■□□□□ 0.63
LINC01238-205ENST00000567549 MPP6Q9NZW5 540 aa19■□□□□ 0.63
LINC01238-205ENST00000567549 RAXQ9Y2V3 346 aa19■□□□□ 0.63
LINC01238-205ENST00000567549 ASPMQ8IZT6 3477 aa18.99■□□□□ 0.63
LINC01238-205ENST00000567549 H3BM21 787 aa18.99■□□□□ 0.63
LINC01238-205ENST00000567549 PLK4O00444 970 aa18.99■□□□□ 0.63
LINC01238-205ENST00000567549 SLC31A1O15431 190 aa18.99■□□□□ 0.63
LINC01238-205ENST00000567549 ACP1P24666 158 aa18.99■□□□□ 0.63
LINC01238-205ENST00000567549 ITGB7P26010 798 aa18.99■□□□□ 0.63
LINC01238-205ENST00000567549 FLT3P36888 993 aa18.99■□□□□ 0.63
LINC01238-205ENST00000567549 DUSP3P51452 185 aaPredicted RBP18.99■□□□□ 0.63
LINC01238-205ENST00000567549 DNA2P51530 1060 aa18.99■□□□□ 0.63
LINC01238-205ENST00000567549 METAP1P53582 386 aa18.99■□□□□ 0.63
LINC01238-205ENST00000567549 CDR2Q01850 454 aa18.99■□□□□ 0.63
LINC01238-205ENST00000567549 NRG1Q02297 640 aaPredicted RBP18.99■□□□□ 0.63
LINC01238-205ENST00000567549 GNA12Q03113 381 aa18.99■□□□□ 0.63
LINC01238-205ENST00000567549 KCNMA1Q12791 1236 aa18.99■□□□□ 0.63
LINC01238-205ENST00000567549 ZNF211Q13398 564 aaPredicted RBP18.99■□□□□ 0.63
LINC01238-205ENST00000567549 HSP90AA4PQ58FG1 418 aa18.99■□□□□ 0.63
LINC01238-205ENST00000567549 NAA35Q5VZE5 725 aa18.99■□□□□ 0.63
LINC01238-205ENST00000567549 LRRC69Q6ZNQ3 347 aa18.99■□□□□ 0.63
LINC01238-205ENST00000567549 FAM131BQ86XD5 332 aa18.99■□□□□ 0.63
LINC01238-205ENST00000567549 SPATS2Q86XZ4 545 aaKnown RBP18.99■□□□□ 0.63
LINC01238-205ENST00000567549 TMEM145Q8NBT3 493 aa18.99■□□□□ 0.63
LINC01238-205ENST00000567549 ENOX1Q8TC92 643 aaKnown RBP18.99■□□□□ 0.63
LINC01238-205ENST00000567549 GRIN3AQ8TCU5 1115 aa18.99■□□□□ 0.63
LINC01238-205ENST00000567549 CPA5Q8WXQ8 436 aa18.99■□□□□ 0.63
LINC01238-205ENST00000567549 BAP1Q92560 729 aa18.99■□□□□ 0.63
LINC01238-205ENST00000567549 CFAP57Q96MR6 1250 aa18.99■□□□□ 0.63
LINC01238-205ENST00000567549 DUSP23Q9BVJ7 150 aa18.99■□□□□ 0.63
LINC01238-205ENST00000567549 DONSONQ9NYP3 566 aa18.99■□□□□ 0.63
LINC01238-205ENST00000567549 NCKIPSDQ9NZQ3 722 aa18.99■□□□□ 0.63
LINC01238-205ENST00000567549 TMEM59LQ9UK28 342 aa18.99■□□□□ 0.63
LINC01238-205ENST00000567549 HS3ST3A1Q9Y663 406 aa18.99■□□□□ 0.63
LINC01238-205ENST00000567549 A0A0D9SEW6 157 aa18.98■□□□□ 0.63
LINC01238-205ENST00000567549 FAM149AA5PLN7 773 aa18.98■□□□□ 0.63
LINC01238-205ENST00000567549 ZSCAN5CA6NGD5 496 aaPredicted RBP18.98■□□□□ 0.63
LINC01238-205ENST00000567549 EIF4E1BA6NMX2 242 aaKnown RBP18.98■□□□□ 0.63
LINC01238-205ENST00000567549 WNT9AO14904 365 aa18.98■□□□□ 0.63
LINC01238-205ENST00000567549 RRP8O43159 456 aaKnown RBP18.98■□□□□ 0.63
LINC01238-205ENST00000567549 AP1G1O43747 822 aa18.98■□□□□ 0.63
LINC01238-205ENST00000567549 LEFTY1O75610 366 aa18.98■□□□□ 0.63
LINC01238-205ENST00000567549 ENDOD1O94919 500 aa18.98■□□□□ 0.63
LINC01238-205ENST00000567549 MT-CO1P00395 513 aa18.98■□□□□ 0.63
LINC01238-205ENST00000567549 MMEP08473 750 aa18.98■□□□□ 0.63
LINC01238-205ENST00000567549 CCDC172P0C7W6 258 aa18.98■□□□□ 0.63
LINC01238-205ENST00000567549 L1CAMP32004 1257 aa18.98■□□□□ 0.63
LINC01238-205ENST00000567549 NSFP46459 744 aaKnown RBP18.98■□□□□ 0.63
LINC01238-205ENST00000567549 HNRNPKP61978 463 aaKnown RBP eCLIP18.98■□□□□ 0.63
LINC01238-205ENST00000567549 ATP11AP98196 1134 aa18.98■□□□□ 0.63
LINC01238-205ENST00000567549 RAD51Q06609 339 aa18.98■□□□□ 0.63
LINC01238-205ENST00000567549 BNIP3Q12983 259 aa18.98■□□□□ 0.63
LINC01238-205ENST00000567549 DNAJC3Q13217 504 aa18.98■□□□□ 0.63
LINC01238-205ENST00000567549 SGCGQ13326 291 aa18.98■□□□□ 0.63
LINC01238-205ENST00000567549 CARD16Q5EG05 197 aa18.98■□□□□ 0.63
LINC01238-205ENST00000567549 ARSIQ5FYB1 569 aa18.98■□□□□ 0.63
LINC01238-205ENST00000567549 HES3Q5TGS1 186 aa18.98■□□□□ 0.63
LINC01238-205ENST00000567549 STRADAQ7RTN6 431 aa18.98■□□□□ 0.63
LINC01238-205ENST00000567549 NOP9Q86U38 636 aaKnown RBP18.98■□□□□ 0.63
LINC01238-205ENST00000567549 PDZD3Q86UT5 571 aa18.98■□□□□ 0.63
LINC01238-205ENST00000567549 CALN1Q9BXU9 219 aa18.98■□□□□ 0.63
LINC01238-205ENST00000567549 MAGEH1Q9H213 219 aa18.98■□□□□ 0.63
LINC01238-205ENST00000567549 METTL5Q9NRN9 209 aaKnown RBP18.98■□□□□ 0.63
LINC01238-205ENST00000567549 OR12D3Q9UGF7 316 aa18.98■□□□□ 0.63
LINC01238-205ENST00000567549 RALYQ9UKM9 306 aaKnown RBP18.98■□□□□ 0.63
LINC01238-205ENST00000567549 AK5Q9Y6K8 562 aa18.98■□□□□ 0.63
LINC01238-205ENST00000567549 URB1O60287 2271 aaKnown RBP18.98■□□□□ 0.63
LINC01238-205ENST00000567549 APC2O95996 2303 aa18.97■□□□□ 0.63
LINC01238-205ENST00000567549 ZFHX4Q86UP3 3567 aa18.97■□□□□ 0.63
LINC01238-205ENST00000567549 A0A087WV48 116 aa18.97■□□□□ 0.63
LINC01238-205ENST00000567549 TSPAN6O43657 245 aa18.97■□□□□ 0.63
LINC01238-205ENST00000567549 CTSLP07711 333 aa18.97■□□□□ 0.63
LINC01238-205ENST00000567549 ADRB3P13945 408 aa18.97■□□□□ 0.63
LINC01238-205ENST00000567549 RHOQP17081 205 aa18.97■□□□□ 0.63
LINC01238-205ENST00000567549 TFE3P19532 575 aaPredicted RBP18.97■□□□□ 0.63
LINC01238-205ENST00000567549 MMP8P22894 467 aa18.97■□□□□ 0.63
LINC01238-205ENST00000567549 SOX5P35711 763 aa18.97■□□□□ 0.63
LINC01238-205ENST00000567549 STAT1P42224 750 aa18.97■□□□□ 0.63
LINC01238-205ENST00000567549 PTPN9P43378 593 aa18.97■□□□□ 0.63
LINC01238-205ENST00000567549 TAS2R38P59533 333 aa18.97■□□□□ 0.63
LINC01238-205ENST00000567549 SNRPD1P62314 119 aaKnown RBP18.97■□□□□ 0.63
LINC01238-205ENST00000567549 COL28A1Q2UY09 1125 aa18.97■□□□□ 0.63
LINC01238-205ENST00000567549 ZNF284Q2VY69 593 aa18.97■□□□□ 0.63
LINC01238-205ENST00000567549 RWDD4Q6NW29 188 aaKnown RBP18.97■□□□□ 0.63
LINC01238-205ENST00000567549 C19orf48Q6RUI8 117 aa18.97■□□□□ 0.63
LINC01238-205ENST00000567549 LINGO4Q6UY18 593 aa18.97■□□□□ 0.63
LINC01238-205ENST00000567549 DPY19L3Q6ZPD9 716 aa18.97■□□□□ 0.63
LINC01238-205ENST00000567549 BNIPLQ7Z465 357 aa18.97■□□□□ 0.63
LINC01238-205ENST00000567549 DRC7Q8IY82 874 aa18.97■□□□□ 0.63
LINC01238-205ENST00000567549 OR7D4Q8NG98 312 aa18.97■□□□□ 0.63
LINC01238-205ENST00000567549 OR4C6Q8NH72 309 aa18.97■□□□□ 0.63
LINC01238-205ENST00000567549 CASKIN2Q8WXE0 1202 aa18.97■□□□□ 0.63
LINC01238-205ENST00000567549 OSBPL1AQ9BXW6 950 aa18.97■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms