RNA–Protein interactions for RNA: ENST00000565393.2

TCF4-228, Transcript of transcription factor 4, humanhuman

TSL 1 (best)

Gene TCF4, Length 314 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-228ENST00000565393 FAM72CH0Y354 149 aa6.54□□□□□ -1.36
TCF4-228ENST00000565393 RNF103O00237 685 aa6.54□□□□□ -1.36
TCF4-228ENST00000565393 KRIT1O00522 736 aa6.54□□□□□ -1.36
TCF4-228ENST00000565393 EPHB6O15197 1021 aa6.54□□□□□ -1.36
TCF4-228ENST00000565393 CREB3O43889 395 aa6.54□□□□□ -1.36
TCF4-228ENST00000565393 ZMPSTE24O75844 475 aa6.54□□□□□ -1.36
TCF4-228ENST00000565393 POP4O95707 220 aaKnown RBP6.54□□□□□ -1.36
TCF4-228ENST00000565393 CALB1P05937 261 aa6.54□□□□□ -1.36
TCF4-228ENST00000565393 C1SP09871 688 aa6.54□□□□□ -1.36
TCF4-228ENST00000565393 CDK4P11802 303 aa6.54□□□□□ -1.36
TCF4-228ENST00000565393 RHOQP17081 205 aa6.54□□□□□ -1.36
TCF4-228ENST00000565393 CKMT2P17540 419 aa6.54□□□□□ -1.36
TCF4-228ENST00000565393 DESP17661 470 aa6.54□□□□□ -1.36
TCF4-228ENST00000565393 TNFAIP3P21580 790 aa6.54□□□□□ -1.36
TCF4-228ENST00000565393 GPD1P21695 349 aa6.54□□□□□ -1.36
TCF4-228ENST00000565393 L1CAMP32004 1257 aa6.54□□□□□ -1.36
TCF4-228ENST00000565393 GKP32189 559 aa6.54□□□□□ -1.36
TCF4-228ENST00000565393 ACVRL1P37023 503 aa6.54□□□□□ -1.36
TCF4-228ENST00000565393 ETFBP38117 255 aa6.54□□□□□ -1.36
TCF4-228ENST00000565393 RXRGP48443 463 aa6.54□□□□□ -1.36
TCF4-228ENST00000565393 SERPINH1P50454 418 aaKnown RBP6.54□□□□□ -1.36
TCF4-228ENST00000565393 NEK3P51956 506 aa6.54□□□□□ -1.36
TCF4-228ENST00000565393 GEMIN4P57678 1058 aaKnown RBP6.54□□□□□ -1.36
TCF4-228ENST00000565393 CLDN2P57739 230 aa6.54□□□□□ -1.36
TCF4-228ENST00000565393 TAS2R38P59533 333 aa6.54□□□□□ -1.36
TCF4-228ENST00000565393 MYL5Q02045 173 aa6.54□□□□□ -1.36
TCF4-228ENST00000565393 SMAD1Q15797 465 aaKnown RBP6.54□□□□□ -1.36
TCF4-228ENST00000565393 STX1AQ16623 288 aa6.54□□□□□ -1.36
TCF4-228ENST00000565393 CLEC16AQ2KHT3 1053 aa6.54□□□□□ -1.36
TCF4-228ENST00000565393 ZNF284Q2VY69 593 aa6.54□□□□□ -1.36
TCF4-228ENST00000565393 MYLK3Q32MK0 819 aa6.54□□□□□ -1.36
TCF4-228ENST00000565393 PIP5KL1Q5T9C9 394 aa6.54□□□□□ -1.36
TCF4-228ENST00000565393 FAM72AQ5TYM5 149 aa6.54□□□□□ -1.36
TCF4-228ENST00000565393 FAM72DQ6L9T8 149 aa6.54□□□□□ -1.36
TCF4-228ENST00000565393 C22orf39Q6P5X5 142 aa6.54□□□□□ -1.36
TCF4-228ENST00000565393 WDR59Q6PJI9 974 aa6.54□□□□□ -1.36
TCF4-228ENST00000565393 Q6ZSR6 202 aa6.54□□□□□ -1.36
TCF4-228ENST00000565393 STRADAQ7RTN6 431 aa6.54□□□□□ -1.36
TCF4-228ENST00000565393 TMC6Q7Z403 805 aa6.54□□□□□ -1.36
TCF4-228ENST00000565393 TTC7BQ86TV6 843 aa6.54□□□□□ -1.36
TCF4-228ENST00000565393 TMPRSS12Q86WS5 348 aa6.54□□□□□ -1.36
TCF4-228ENST00000565393 HORMAD1Q86X24 394 aa6.54□□□□□ -1.36
TCF4-228ENST00000565393 FAM72BQ86X60 149 aa6.54□□□□□ -1.36
TCF4-228ENST00000565393 PROSER1Q86XN7 944 aa6.54□□□□□ -1.36
TCF4-228ENST00000565393 PCDH20Q8N6Y1 951 aaKnown RBP6.54□□□□□ -1.36
TCF4-228ENST00000565393 PDCD7Q8N8D1 485 aaKnown RBP6.54□□□□□ -1.36
TCF4-228ENST00000565393 FAM172AQ8WUF8 416 aa6.54□□□□□ -1.36
TCF4-228ENST00000565393 ARHGEF2Q92974 986 aaKnown RBP6.54□□□□□ -1.36
TCF4-228ENST00000565393 TBC1D31Q96DN5 1066 aa6.54□□□□□ -1.36
TCF4-228ENST00000565393 HDAC8Q9BY41 377 aa6.54□□□□□ -1.36
TCF4-228ENST00000565393 SLC17A9Q9BYT1 436 aa6.54□□□□□ -1.36
TCF4-228ENST00000565393 TM6SF2Q9BZW4 377 aa6.54□□□□□ -1.36
TCF4-228ENST00000565393 CEP44Q9C0F1 390 aa6.54□□□□□ -1.36
TCF4-228ENST00000565393 NAT10Q9H0A0 1025 aaKnown RBP6.54□□□□□ -1.36
TCF4-228ENST00000565393 MAGEH1Q9H213 219 aa6.54□□□□□ -1.36
TCF4-228ENST00000565393 ZDHHC6Q9H6R6 413 aa6.54□□□□□ -1.36
TCF4-228ENST00000565393 FZD3Q9NPG1 666 aa6.54□□□□□ -1.36
TCF4-228ENST00000565393 LIMA1Q9UHB6 759 aaKnown RBP6.54□□□□□ -1.36
TCF4-228ENST00000565393 LHX6Q9UPM6 363 aa6.54□□□□□ -1.36
TCF4-228ENST00000565393 DAAM1Q9Y4D1 1078 aa6.54□□□□□ -1.36
TCF4-228ENST00000565393 ACTL7AQ9Y615 435 aa6.54□□□□□ -1.36
TCF4-228ENST00000565393 AK5Q9Y6K8 562 aa6.54□□□□□ -1.36
TCF4-228ENST00000565393 EML5Q05BV3 1969 aa6.54□□□□□ -1.36
TCF4-228ENST00000565393 MYO16Q9Y6X6 1858 aa6.53□□□□□ -1.36
TCF4-228ENST00000565393 KIAA1549LQ6ZVL6 1849 aa6.53□□□□□ -1.36
TCF4-228ENST00000565393 NEMP2A6NFY4 417 aa6.53□□□□□ -1.36
TCF4-228ENST00000565393 IGLON5A6NGN9 336 aa6.53□□□□□ -1.36
TCF4-228ENST00000565393 LRRC10BA6NIK2 292 aa6.53□□□□□ -1.36
TCF4-228ENST00000565393 C2CD4BA6NLJ0 364 aa6.53□□□□□ -1.36
TCF4-228ENST00000565393 C16orf96A6NNT2 1141 aa6.53□□□□□ -1.36
TCF4-228ENST00000565393 SMTNL1A8MU46 457 aa6.53□□□□□ -1.36
TCF4-228ENST00000565393 LGALS16A8MUM7 142 aa6.53□□□□□ -1.36
TCF4-228ENST00000565393 TMCO5BA8MYB1 307 aa6.53□□□□□ -1.36
TCF4-228ENST00000565393 DAPK3O43293 454 aa6.53□□□□□ -1.36
TCF4-228ENST00000565393 KDELR3O43731 214 aa6.53□□□□□ -1.36
TCF4-228ENST00000565393 RAMP2O60895 175 aa6.53□□□□□ -1.36
TCF4-228ENST00000565393 RFPL3O75679 317 aa6.53□□□□□ -1.36
TCF4-228ENST00000565393 LRIG2O94898 1065 aa6.53□□□□□ -1.36
TCF4-228ENST00000565393 UNGP13051 313 aaPredicted RBP6.53□□□□□ -1.36
TCF4-228ENST00000565393 ADRB3P13945 408 aa6.53□□□□□ -1.36
TCF4-228ENST00000565393 FERP16591 822 aa6.53□□□□□ -1.36
TCF4-228ENST00000565393 HNRNPA2B1P22626 353 aaKnown RBP6.53□□□□□ -1.36
TCF4-228ENST00000565393 XPAP23025 273 aaPredicted RBP6.53□□□□□ -1.36
TCF4-228ENST00000565393 EPHA8P29322 1005 aaPredicted RBP6.53□□□□□ -1.36
TCF4-228ENST00000565393 EPHB2P29323 1055 aa6.53□□□□□ -1.36
TCF4-228ENST00000565393 HNF1BP35680 557 aa6.53□□□□□ -1.36
TCF4-228ENST00000565393 PTPN9P43378 593 aa6.53□□□□□ -1.36
TCF4-228ENST00000565393 CCNHP51946 323 aaPredicted RBP6.53□□□□□ -1.36
TCF4-228ENST00000565393 HDAC4P56524 1084 aa6.53□□□□□ -1.36
TCF4-228ENST00000565393 CLDN6P56747 220 aa6.53□□□□□ -1.36
TCF4-228ENST00000565393 JAM2P57087 298 aa6.53□□□□□ -1.36
TCF4-228ENST00000565393 SNRPD1P62314 119 aaKnown RBP6.53□□□□□ -1.36
TCF4-228ENST00000565393 RPS21P63220 83 aaKnown RBP6.53□□□□□ -1.36
TCF4-228ENST00000565393 ARF5P84085 180 aa6.53□□□□□ -1.36
TCF4-228ENST00000565393 DAB2P98082 770 aa6.53□□□□□ -1.36
TCF4-228ENST00000565393 RAD51Q06609 339 aa6.53□□□□□ -1.36
TCF4-228ENST00000565393 TARDBPQ13148 414 aaKnown RBP eCLIP6.53□□□□□ -1.36
TCF4-228ENST00000565393 FILIP1LQ4L180 1135 aa6.53□□□□□ -1.36
TCF4-228ENST00000565393 ZNF805Q5CZA5 627 aa6.53□□□□□ -1.36
TCF4-228ENST00000565393 ZNF542PQ5EBM4 170 aa6.53□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms