RNA–Protein interactions for RNA: ENST00000565384.1

NSMCE1-209, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

TSL 3

Gene NSMCE1, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-209ENST00000565384 ABI3BPQ7Z7G0 1075 aa11.85□□□□□ -0.51
NSMCE1-209ENST00000565384 SETD3Q86TU7 594 aaPredicted RBP11.85□□□□□ -0.51
NSMCE1-209ENST00000565384 ZNF683Q8IZ20 524 aa11.85□□□□□ -0.51
NSMCE1-209ENST00000565384 ZNF397Q8NF99 534 aaPredicted RBP11.85□□□□□ -0.51
NSMCE1-209ENST00000565384 GRIN3AQ8TCU5 1115 aa11.85□□□□□ -0.51
NSMCE1-209ENST00000565384 IFT43Q96FT9 208 aa11.85□□□□□ -0.51
NSMCE1-209ENST00000565384 NAF1Q96HR8 494 aaKnown RBP11.85□□□□□ -0.51
NSMCE1-209ENST00000565384 APOLD1Q96LR9 279 aa11.85□□□□□ -0.51
NSMCE1-209ENST00000565384 ZNF578Q96N58 590 aaPredicted RBP11.85□□□□□ -0.51
NSMCE1-209ENST00000565384 DEPDC7Q96QD5 511 aa11.85□□□□□ -0.51
NSMCE1-209ENST00000565384 NPY6RQ99463 290 aa11.85□□□□□ -0.51
NSMCE1-209ENST00000565384 HDAC8Q9BY41 377 aa11.85□□□□□ -0.51
NSMCE1-209ENST00000565384 WDCPQ9H6R7 721 aa11.85□□□□□ -0.51
NSMCE1-209ENST00000565384 SYNCQ9H7C4 482 aa11.85□□□□□ -0.51
NSMCE1-209ENST00000565384 NLGN3Q9NZ94 848 aa11.85□□□□□ -0.51
NSMCE1-209ENST00000565384 IL36AQ9UHA7 158 aa11.85□□□□□ -0.51
NSMCE1-209ENST00000565384 STAP1Q9ULZ2 295 aa11.85□□□□□ -0.51
NSMCE1-209ENST00000565384 SNX10Q9Y5X0 201 aa11.85□□□□□ -0.51
NSMCE1-209ENST00000565384 LY6G6EA0A0G2JKS1 128 aa11.84□□□□□ -0.51
NSMCE1-209ENST00000565384 DRGXA6NNA5 263 aa11.84□□□□□ -0.51
NSMCE1-209ENST00000565384 A6NNZ2 444 aa11.84□□□□□ -0.51
NSMCE1-209ENST00000565384 K7ESM1 405 aa11.84□□□□□ -0.51
NSMCE1-209ENST00000565384 CSO75390 466 aaKnown RBP11.84□□□□□ -0.51
NSMCE1-209ENST00000565384 LEFTY1O75610 366 aa11.84□□□□□ -0.51
NSMCE1-209ENST00000565384 GP1BAP07359 652 aa11.84□□□□□ -0.51
NSMCE1-209ENST00000565384 PLA2G2AP14555 144 aa11.84□□□□□ -0.51
NSMCE1-209ENST00000565384 TFE3P19532 575 aaPredicted RBP11.84□□□□□ -0.51
NSMCE1-209ENST00000565384 RECQLP46063 649 aaPredicted RBP11.84□□□□□ -0.51
NSMCE1-209ENST00000565384 CXCR3P49682 368 aa11.84□□□□□ -0.51
NSMCE1-209ENST00000565384 NEK3P51956 506 aa11.84□□□□□ -0.51
NSMCE1-209ENST00000565384 SNX16P57768 344 aa11.84□□□□□ -0.51
NSMCE1-209ENST00000565384 PTK2Q05397 1052 aa11.84□□□□□ -0.51
NSMCE1-209ENST00000565384 EXOC3L4Q17RC7 722 aa11.84□□□□□ -0.51
NSMCE1-209ENST00000565384 SKOR2Q2VWA4 1001 aaPredicted RBP11.84□□□□□ -0.51
NSMCE1-209ENST00000565384 TMEM259Q4ZIN3 620 aa11.84□□□□□ -0.51
NSMCE1-209ENST00000565384 ZNF542PQ5EBM4 170 aa11.84□□□□□ -0.51
NSMCE1-209ENST00000565384 ARSIQ5FYB1 569 aa11.84□□□□□ -0.51
NSMCE1-209ENST00000565384 PCSK4Q6UW60 755 aa11.84□□□□□ -0.51
NSMCE1-209ENST00000565384 KYAT3Q6YP21 454 aaKnown RBP11.84□□□□□ -0.51
NSMCE1-209ENST00000565384 GBP6Q6ZN66 633 aa11.84□□□□□ -0.51
NSMCE1-209ENST00000565384 DPY19L3Q6ZPD9 716 aa11.84□□□□□ -0.51
NSMCE1-209ENST00000565384 Q6ZSR6 202 aa11.84□□□□□ -0.51
NSMCE1-209ENST00000565384 PTAR1Q7Z6K3 402 aaPredicted RBP11.84□□□□□ -0.51
NSMCE1-209ENST00000565384 TFAP2DQ7Z6R9 452 aa11.84□□□□□ -0.51
NSMCE1-209ENST00000565384 CREBRFQ8IUR6 639 aa11.84□□□□□ -0.51
NSMCE1-209ENST00000565384 LSMEM2Q8N112 164 aa11.84□□□□□ -0.51
NSMCE1-209ENST00000565384 ZNF843Q8N446 348 aa11.84□□□□□ -0.51
NSMCE1-209ENST00000565384 FAM181AQ8N9Y4 354 aa11.84□□□□□ -0.51
NSMCE1-209ENST00000565384 FAM174AQ8TBP5 190 aa11.84□□□□□ -0.51
NSMCE1-209ENST00000565384 PPP1R16AQ96I34 528 aa11.84□□□□□ -0.51
NSMCE1-209ENST00000565384 HIC2Q96JB3 615 aa11.84□□□□□ -0.51
NSMCE1-209ENST00000565384 BMFQ96LC9 184 aa11.84□□□□□ -0.51
NSMCE1-209ENST00000565384 DUSP23Q9BVJ7 150 aa11.84□□□□□ -0.51
NSMCE1-209ENST00000565384 TNKS2Q9H2K2 1166 aa11.84□□□□□ -0.51
NSMCE1-209ENST00000565384 USP29Q9HBJ7 922 aa11.84□□□□□ -0.51
NSMCE1-209ENST00000565384 PLCB1Q9NQ66 1216 aa11.84□□□□□ -0.51
NSMCE1-209ENST00000565384 GPR27Q9NS67 375 aa11.84□□□□□ -0.51
NSMCE1-209ENST00000565384 LMBRD1Q9NUN5 540 aa11.84□□□□□ -0.51
NSMCE1-209ENST00000565384 EVA1BQ9NVM1 165 aa11.84□□□□□ -0.51
NSMCE1-209ENST00000565384 DNAJC28Q9NX36 388 aa11.84□□□□□ -0.51
NSMCE1-209ENST00000565384 RRN3Q9NYV6 651 aa11.84□□□□□ -0.51
NSMCE1-209ENST00000565384 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP11.84□□□□□ -0.51
NSMCE1-209ENST00000565384 AJAP1Q9UKB5 411 aaPredicted RBP11.84□□□□□ -0.51
NSMCE1-209ENST00000565384 U3KQA8 63 aa11.84□□□□□ -0.51
NSMCE1-209ENST00000565384 PTPRQQ9UMZ3 2332 aa11.83□□□□□ -0.51
NSMCE1-209ENST00000565384 NEMP2A6NFY4 417 aa11.83□□□□□ -0.52
NSMCE1-209ENST00000565384 ERVH48-1M5A8F1 160 aa11.83□□□□□ -0.52
NSMCE1-209ENST00000565384 SCAMP1O15126 338 aa11.83□□□□□ -0.52
NSMCE1-209ENST00000565384 USP12O75317 370 aa11.83□□□□□ -0.52
NSMCE1-209ENST00000565384 NEBLO76041 1014 aa11.83□□□□□ -0.52
NSMCE1-209ENST00000565384 DXOO77932 396 aaKnown RBP11.83□□□□□ -0.52
NSMCE1-209ENST00000565384 ENDOD1O94919 500 aa11.83□□□□□ -0.52
NSMCE1-209ENST00000565384 ADRB3P13945 408 aa11.83□□□□□ -0.52
NSMCE1-209ENST00000565384 PON1P27169 355 aa11.83□□□□□ -0.52
NSMCE1-209ENST00000565384 KRT9P35527 623 aa11.83□□□□□ -0.52
NSMCE1-209ENST00000565384 DUSP3P51452 185 aaPredicted RBP11.83□□□□□ -0.52
NSMCE1-209ENST00000565384 TMPRSS3P57727 454 aa11.83□□□□□ -0.52
NSMCE1-209ENST00000565384 RNASE9P60153 205 aaKnown RBP11.83□□□□□ -0.52
NSMCE1-209ENST00000565384 HNRNPKP61978 463 aaKnown RBP eCLIP11.83□□□□□ -0.52
NSMCE1-209ENST00000565384 CFHR1Q03591 330 aa11.83□□□□□ -0.52
NSMCE1-209ENST00000565384 DEUP1Q05D60 604 aa11.83□□□□□ -0.52
NSMCE1-209ENST00000565384 MAPK8IP2Q13387 824 aaPredicted RBP11.83□□□□□ -0.52
NSMCE1-209ENST00000565384 FGL2Q14314 439 aa11.83□□□□□ -0.52
NSMCE1-209ENST00000565384 BROXQ5VW32 411 aa11.83□□□□□ -0.52
NSMCE1-209ENST00000565384 KIAA1161Q6NSJ0 714 aa11.83□□□□□ -0.52
NSMCE1-209ENST00000565384 LRRC31Q6UY01 552 aa11.83□□□□□ -0.52
NSMCE1-209ENST00000565384 ZNF605Q86T29 641 aa11.83□□□□□ -0.52
NSMCE1-209ENST00000565384 SLC47A2Q86VL8 602 aa11.83□□□□□ -0.52
NSMCE1-209ENST00000565384 DCP2Q8IU60 420 aaKnown RBP11.83□□□□□ -0.52
NSMCE1-209ENST00000565384 ZDHHC17Q8IUH5 632 aa11.83□□□□□ -0.52
NSMCE1-209ENST00000565384 ZNF548Q8NEK5 533 aaPredicted RBP11.83□□□□□ -0.52
NSMCE1-209ENST00000565384 OR7D4Q8NG98 312 aa11.83□□□□□ -0.52
NSMCE1-209ENST00000565384 IFI44Q8TCB0 444 aa11.83□□□□□ -0.52
NSMCE1-209ENST00000565384 PGAP3Q96FM1 320 aaPredicted RBP11.83□□□□□ -0.52
NSMCE1-209ENST00000565384 SLC17A9Q9BYT1 436 aa11.83□□□□□ -0.52
NSMCE1-209ENST00000565384 ABCG4Q9H172 646 aa11.83□□□□□ -0.52
NSMCE1-209ENST00000565384 POLR1BQ9H9Y6 1135 aa11.83□□□□□ -0.52
NSMCE1-209ENST00000565384 TMPRSS4Q9NRS4 437 aa11.83□□□□□ -0.52
NSMCE1-209ENST00000565384 MPP6Q9NZW5 540 aa11.83□□□□□ -0.52
NSMCE1-209ENST00000565384 HS3ST3A1Q9Y663 406 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms