RNA–Protein interactions for RNA: ENST00000564628.1

NME3-207, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 5

Gene NME3, Length 811 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-207ENST00000564628 TRIM11Q96F44 468 aa19.4■□□□□ 0.7
NME3-207ENST00000564628 LRIG1Q96JA1 1093 aa19.4■□□□□ 0.7
NME3-207ENST00000564628 RPRD1AQ96P16 312 aaPredicted RBP19.4■□□□□ 0.7
NME3-207ENST00000564628 SIK2Q9H0K1 926 aa19.4■□□□□ 0.7
NME3-207ENST00000564628 FBXL12Q9NXK8 326 aa19.4■□□□□ 0.7
NME3-207ENST00000564628 PCDHGA1Q9Y5H4 931 aa19.4■□□□□ 0.7
NME3-207ENST00000564628 SNX10Q9Y5X0 201 aa19.4■□□□□ 0.7
NME3-207ENST00000564628 FAM149AA5PLN7 773 aa19.39■□□□□ 0.69
NME3-207ENST00000564628 ANKRD62A6NC57 917 aa19.39■□□□□ 0.69
NME3-207ENST00000564628 DRGXA6NNA5 263 aa19.39■□□□□ 0.69
NME3-207ENST00000564628 RNASEH1O60930 286 aaKnown RBP19.39■□□□□ 0.69
NME3-207ENST00000564628 CDK4P11802 303 aa19.39■□□□□ 0.69
NME3-207ENST00000564628 GALCP54803 685 aa19.39■□□□□ 0.69
NME3-207ENST00000564628 ASTE1Q2TB18 679 aaPredicted RBP19.39■□□□□ 0.69
NME3-207ENST00000564628 DCUN1D2Q6PH85 259 aa19.39■□□□□ 0.69
NME3-207ENST00000564628 FNIP1Q8TF40 1166 aa19.39■□□□□ 0.69
NME3-207ENST00000564628 ZNF653Q96CK0 615 aa19.39■□□□□ 0.69
NME3-207ENST00000564628 PPP1R9BQ96SB3 815 aa19.39■□□□□ 0.69
NME3-207ENST00000564628 ABHD10Q9NUJ1 306 aa19.39■□□□□ 0.69
NME3-207ENST00000564628 CNOT8Q9UFF9 292 aaKnown RBP19.39■□□□□ 0.69
NME3-207ENST00000564628 FZD4Q9ULV1 537 aa19.39■□□□□ 0.69
NME3-207ENST00000564628 URB1O60287 2271 aaKnown RBP19.39■□□□□ 0.69
NME3-207ENST00000564628 TMEM191CA6NGB0 347 aa19.38■□□□□ 0.69
NME3-207ENST00000564628 LRRC72A6NJI9 287 aa19.38■□□□□ 0.69
NME3-207ENST00000564628 GOLGA6L6A8MZA4 724 aa19.38■□□□□ 0.69
NME3-207ENST00000564628 C10orf142B7Z368 130 aa19.38■□□□□ 0.69
NME3-207ENST00000564628 SIN3BO75182 1162 aa19.38■□□□□ 0.69
NME3-207ENST00000564628 CLDN11O75508 207 aa19.38■□□□□ 0.69
NME3-207ENST00000564628 PLK1P53350 603 aa19.38■□□□□ 0.69
NME3-207ENST00000564628 MAPK8IP2Q13387 824 aaPredicted RBP19.38■□□□□ 0.69
NME3-207ENST00000564628 SLC12A1Q13621 1099 aa19.38■□□□□ 0.69
NME3-207ENST00000564628 PITRM1Q5JRX3 1037 aa19.38■□□□□ 0.69
NME3-207ENST00000564628 MANEALQ5VSG8 457 aa19.38■□□□□ 0.69
NME3-207ENST00000564628 DHRS13Q6UX07 377 aa19.38■□□□□ 0.69
NME3-207ENST00000564628 CCDC117Q8IWD4 279 aaPredicted RBP19.38■□□□□ 0.69
NME3-207ENST00000564628 CCDC185Q8N715 623 aa19.38■□□□□ 0.69
NME3-207ENST00000564628 GANCQ8TET4 914 aa19.38■□□□□ 0.69
NME3-207ENST00000564628 PDLIM2Q96JY6 352 aa19.38■□□□□ 0.69
NME3-207ENST00000564628 MRGPRX3Q96LB0 322 aa19.38■□□□□ 0.69
NME3-207ENST00000564628 SLC6A18Q96N87 628 aa19.38■□□□□ 0.69
NME3-207ENST00000564628 BBC3Q96PG8 261 aaPredicted RBP19.38■□□□□ 0.69
NME3-207ENST00000564628 ELF4Q99607 663 aaPredicted RBP19.38■□□□□ 0.69
NME3-207ENST00000564628 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP19.38■□□□□ 0.69
NME3-207ENST00000564628 OSBPL2Q9H1P3 480 aa19.38■□□□□ 0.69
NME3-207ENST00000564628 MTG2Q9H4K7 406 aa19.38■□□□□ 0.69
NME3-207ENST00000564628 ZNF212Q9UDV6 495 aa19.38■□□□□ 0.69
NME3-207ENST00000564628 TPX2Q9ULW0 747 aaKnown RBP19.38■□□□□ 0.69
NME3-207ENST00000564628 TBC1D30Q9Y2I9 924 aa19.38■□□□□ 0.69
NME3-207ENST00000564628 SCINQ9Y6U3 715 aa19.38■□□□□ 0.69
NME3-207ENST00000564628 SSU72P8A0A1W2PR75 194 aa19.37■□□□□ 0.69
NME3-207ENST00000564628 TARSL2A2RTX5 802 aaKnown RBP19.37■□□□□ 0.69
NME3-207ENST00000564628 YKT6O15498 198 aa19.37■□□□□ 0.69
NME3-207ENST00000564628 CNTN5O94779 1100 aa19.37■□□□□ 0.69
NME3-207ENST00000564628 TPM1P09493 284 aa19.37■□□□□ 0.69
NME3-207ENST00000564628 C1SP09871 688 aa19.37■□□□□ 0.69
NME3-207ENST00000564628 EIF4A3P38919 411 aaKnown RBP19.37■□□□□ 0.69
NME3-207ENST00000564628 CSKP41240 450 aa19.37■□□□□ 0.69
NME3-207ENST00000564628 CDH4P55283 916 aa19.37■□□□□ 0.69
NME3-207ENST00000564628 IL9RQ01113 521 aa19.37■□□□□ 0.69
NME3-207ENST00000564628 CST6Q15828 149 aa19.37■□□□□ 0.69
NME3-207ENST00000564628 ARL13BQ3SXY8 428 aa19.37■□□□□ 0.69
NME3-207ENST00000564628 ALFQ53S48 1182 aa19.37■□□□□ 0.69
NME3-207ENST00000564628 CCDC157Q569K6 752 aa19.37■□□□□ 0.69
NME3-207ENST00000564628 NCEH1Q6PIU2 408 aa19.37■□□□□ 0.69
NME3-207ENST00000564628 TMC6Q7Z403 805 aa19.37■□□□□ 0.69
NME3-207ENST00000564628 OR2T34Q8NGX1 318 aa19.37■□□□□ 0.69
NME3-207ENST00000564628 ALG14Q96F25 216 aa19.37■□□□□ 0.69
NME3-207ENST00000564628 SERGEFQ9UGK8 458 aa19.37■□□□□ 0.69
NME3-207ENST00000564628 NEU3Q9UQ49 428 aa19.37■□□□□ 0.69
NME3-207ENST00000564628 SMG1Q96Q15 3661 aaKnown RBP19.37■□□□□ 0.69
NME3-207ENST00000564628 PLXNA2O75051 1894 aa19.37■□□□□ 0.69
NME3-207ENST00000564628 FAM47DPA6NHR8 397 aa19.36■□□□□ 0.69
NME3-207ENST00000564628 SRPRAP08240 638 aaKnown RBP19.36■□□□□ 0.69
NME3-207ENST00000564628 CCR5P51681 352 aa19.36■□□□□ 0.69
NME3-207ENST00000564628 ADKP55263 362 aaKnown RBP19.36■□□□□ 0.69
NME3-207ENST00000564628 OXCT1P55809 520 aa19.36■□□□□ 0.69
NME3-207ENST00000564628 C9orf64Q5T6V5 341 aa19.36■□□□□ 0.69
NME3-207ENST00000564628 ALKBH5Q6P6C2 394 aaKnown RBP19.36■□□□□ 0.69
NME3-207ENST00000564628 CNGA4Q8IV77 575 aa19.36■□□□□ 0.69
NME3-207ENST00000564628 OR52K2Q8NGK3 314 aa19.36■□□□□ 0.69
NME3-207ENST00000564628 SAP25Q8TEE9 199 aa19.36■□□□□ 0.69
NME3-207ENST00000564628 TRIM7Q9C029 511 aa19.36■□□□□ 0.69
NME3-207ENST00000564628 NEUROG2Q9H2A3 272 aa19.36■□□□□ 0.69
NME3-207ENST00000564628 EBF2Q9HAK2 575 aa19.36■□□□□ 0.69
NME3-207ENST00000564628 PPARGC1AQ9UBK2 798 aaKnown RBP19.36■□□□□ 0.69
NME3-207ENST00000564628 OR51B4Q9Y5P0 310 aa19.36■□□□□ 0.69
NME3-207ENST00000564628 GOLGA4Q13439 2230 aaKnown RBP19.36■□□□□ 0.69
NME3-207ENST00000564628 TP53BP1Q12888 1972 aaPredicted RBP19.35■□□□□ 0.69
NME3-207ENST00000564628 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP19.35■□□□□ 0.69
NME3-207ENST00000564628 A0A1W2PP55 124 aa19.35■□□□□ 0.69
NME3-207ENST00000564628 ENC1O14682 589 aa19.35■□□□□ 0.69
NME3-207ENST00000564628 MID1O15344 667 aa19.35■□□□□ 0.69
NME3-207ENST00000564628 RNASEH2AO75792 299 aaKnown RBP19.35■□□□□ 0.69
NME3-207ENST00000564628 WNT1P04628 370 aa19.35■□□□□ 0.69
NME3-207ENST00000564628 CYP1A2P05177 515 aa19.35■□□□□ 0.69
NME3-207ENST00000564628 PSMA2P25787 234 aa19.35■□□□□ 0.69
NME3-207ENST00000564628 MZF1P28698 734 aaPredicted RBP19.35■□□□□ 0.69
NME3-207ENST00000564628 CD38P28907 300 aa19.35■□□□□ 0.69
NME3-207ENST00000564628 HNF1BP35680 557 aa19.35■□□□□ 0.69
NME3-207ENST00000564628 AIF1P55008 147 aa19.35■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms