RNA–Protein interactions for RNA: ENST00000562297.5

PKD1-225, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 5

Gene PKD1, Length 2,040 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-225ENST00000562297 SOX13Q9UN79 622 aa16.84■□□□□ 0.29
PKD1-225ENST00000562297 A0A0D9SEW6 157 aa16.83■□□□□ 0.28
PKD1-225ENST00000562297 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP16.83■□□□□ 0.28
PKD1-225ENST00000562297 MAGEB16A2A368 324 aa16.83■□□□□ 0.28
PKD1-225ENST00000562297 AP3B1O00203 1094 aa16.83■□□□□ 0.28
PKD1-225ENST00000562297 ATP9BO43861 1147 aa16.83■□□□□ 0.28
PKD1-225ENST00000562297 GREM1O60565 184 aa16.83■□□□□ 0.28
PKD1-225ENST00000562297 PRAMEF11O60813 436 aa16.83■□□□□ 0.28
PKD1-225ENST00000562297 RFPL1O75677 317 aa16.83■□□□□ 0.28
PKD1-225ENST00000562297 CXCL14O95715 111 aa16.83■□□□□ 0.28
PKD1-225ENST00000562297 MMP2P08253 660 aa16.83■□□□□ 0.28
PKD1-225ENST00000562297 HOXD9P28356 352 aaPredicted RBP16.83■□□□□ 0.28
PKD1-225ENST00000562297 CDH4P55283 916 aa16.83■□□□□ 0.28
PKD1-225ENST00000562297 ZXDBP98169 803 aa16.83■□□□□ 0.28
PKD1-225ENST00000562297 ANKRD20A4Q4UJ75 823 aa16.83■□□□□ 0.28
PKD1-225ENST00000562297 RANBP10Q6VN20 620 aa16.83■□□□□ 0.28
PKD1-225ENST00000562297 PGBD5Q8N414 524 aa16.83■□□□□ 0.28
PKD1-225ENST00000562297 RAD9AQ99638 391 aa16.83■□□□□ 0.28
PKD1-225ENST00000562297 NT5MQ9NPB1 228 aa16.83■□□□□ 0.28
PKD1-225ENST00000562297 CHRAC1Q9NRG0 131 aa16.83■□□□□ 0.28
PKD1-225ENST00000562297 ASB3Q9Y575 518 aa16.83■□□□□ 0.28
PKD1-225ENST00000562297 IRAK3Q9Y616 596 aa16.83■□□□□ 0.28
PKD1-225ENST00000562297 PSAT1Q9Y617 370 aa16.83■□□□□ 0.28
PKD1-225ENST00000562297 FAM169AQ9Y6X4 670 aa16.83■□□□□ 0.28
PKD1-225ENST00000562297 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP16.82■□□□□ 0.28
PKD1-225ENST00000562297 IRF1P10914 325 aa16.82■□□□□ 0.28
PKD1-225ENST00000562297 PYGBP11216 843 aa16.82■□□□□ 0.28
PKD1-225ENST00000562297 FOXN2P32314 431 aa16.82■□□□□ 0.28
PKD1-225ENST00000562297 ERVFC1P60507 584 aa16.82■□□□□ 0.28
PKD1-225ENST00000562297 MGAT5Q09328 741 aa16.82■□□□□ 0.28
PKD1-225ENST00000562297 NAB1Q13506 487 aa16.82■□□□□ 0.28
PKD1-225ENST00000562297 RABGAP1LQ5R372 815 aa16.82■□□□□ 0.28
PKD1-225ENST00000562297 PSRC1Q6PGN9 363 aaPredicted RBP16.82■□□□□ 0.28
PKD1-225ENST00000562297 GAREM2Q75VX8 874 aa16.82■□□□□ 0.28
PKD1-225ENST00000562297 TMC8Q8IU68 726 aa16.82■□□□□ 0.28
PKD1-225ENST00000562297 TADA1Q96BN2 335 aa16.82■□□□□ 0.28
PKD1-225ENST00000562297 ZNF669Q96BR6 464 aaPredicted RBP16.82■□□□□ 0.28
PKD1-225ENST00000562297 MFSD3Q96ES6 412 aa16.82■□□□□ 0.28
PKD1-225ENST00000562297 MAGEB18Q96M61 343 aa16.82■□□□□ 0.28
PKD1-225ENST00000562297 FICDQ9BVA6 458 aa16.82■□□□□ 0.28
PKD1-225ENST00000562297 KIFC1Q9BW19 673 aa16.82■□□□□ 0.28
PKD1-225ENST00000562297 TRANK1O15050 2925 aa16.82■□□□□ 0.28
PKD1-225ENST00000562297 EBAG9O00559 213 aa16.82■□□□□ 0.28
PKD1-225ENST00000562297 PMPCBO75439 489 aa16.82■□□□□ 0.28
PKD1-225ENST00000562297 KRT38O76015 456 aa16.82■□□□□ 0.28
PKD1-225ENST00000562297 ZWINTO95229 277 aa16.82■□□□□ 0.28
PKD1-225ENST00000562297 ERVK-10P10266 1014 aa16.82■□□□□ 0.28
PKD1-225ENST00000562297 SERPINB9P50453 376 aa16.82■□□□□ 0.28
PKD1-225ENST00000562297 NEK3P51956 506 aa16.82■□□□□ 0.28
PKD1-225ENST00000562297 MAXP61244 160 aa16.82■□□□□ 0.28
PKD1-225ENST00000562297 MPP3Q13368 585 aa16.82■□□□□ 0.28
PKD1-225ENST00000562297 BMPR2Q13873 1038 aa16.82■□□□□ 0.28
PKD1-225ENST00000562297 PABPC1LQ4VXU2 614 aaKnown RBP16.82■□□□□ 0.28
PKD1-225ENST00000562297 TXNDC8Q6A555 127 aa16.82■□□□□ 0.28
PKD1-225ENST00000562297 TMC7Q7Z402 723 aa16.82■□□□□ 0.28
PKD1-225ENST00000562297 TAX1BP1Q86VP1 789 aa16.82■□□□□ 0.28
PKD1-225ENST00000562297 CCDC117Q8IWD4 279 aaPredicted RBP16.82■□□□□ 0.28
PKD1-225ENST00000562297 SERBP1Q8NC51 408 aaKnown RBP eCLIP16.82■□□□□ 0.28
PKD1-225ENST00000562297 ARRDC2Q8TBH0 407 aa16.82■□□□□ 0.28
PKD1-225ENST00000562297 TCP10LQ8TDR4 215 aa16.82■□□□□ 0.28
PKD1-225ENST00000562297 HERVK_113Q902F9 699 aa16.82■□□□□ 0.28
PKD1-225ENST00000562297 CDKL2Q92772 493 aa16.82■□□□□ 0.28
PKD1-225ENST00000562297 MTBPQ96DY7 904 aa16.82■□□□□ 0.28
PKD1-225ENST00000562297 ZNF778Q96MU6 729 aa16.82■□□□□ 0.28
PKD1-225ENST00000562297 MAGEH1Q9H213 219 aa16.82■□□□□ 0.28
PKD1-225ENST00000562297 ATP13A1Q9HD20 1204 aa16.82■□□□□ 0.28
PKD1-225ENST00000562297 ENTPD7Q9NQZ7 604 aa16.82■□□□□ 0.28
PKD1-225ENST00000562297 SMPD4Q9NXE4 827 aa16.82■□□□□ 0.28
PKD1-225ENST00000562297 HELZP42694 1942 aaKnown RBP16.81■□□□□ 0.28
PKD1-225ENST00000562297 TCP11X1B4DZS4 312 aa16.81■□□□□ 0.28
PKD1-225ENST00000562297 NRG2O14511 850 aaPredicted RBP16.81■□□□□ 0.28
PKD1-225ENST00000562297 TM9SF1O15321 606 aa16.81■□□□□ 0.28
PKD1-225ENST00000562297 CLDN11O75508 207 aa16.81■□□□□ 0.28
PKD1-225ENST00000562297 MBL2P11226 248 aaPredicted RBP16.81■□□□□ 0.28
PKD1-225ENST00000562297 CA8P35219 290 aa16.81■□□□□ 0.28
PKD1-225ENST00000562297 CCNFP41002 786 aa16.81■□□□□ 0.28
PKD1-225ENST00000562297 WNT3AP56704 352 aa16.81■□□□□ 0.28
PKD1-225ENST00000562297 IL9RQ01113 521 aa16.81■□□□□ 0.28
PKD1-225ENST00000562297 GNA12Q03113 381 aa16.81■□□□□ 0.28
PKD1-225ENST00000562297 LBRQ14739 615 aaKnown RBP16.81■□□□□ 0.28
PKD1-225ENST00000562297 LGSNQ5TDP6 509 aa16.81■□□□□ 0.28
PKD1-225ENST00000562297 PACS1Q6VY07 963 aa16.81■□□□□ 0.28
PKD1-225ENST00000562297 CHST9Q7L1S5 443 aa16.81■□□□□ 0.28
PKD1-225ENST00000562297 CPLX4Q7Z7G2 160 aa16.81■□□□□ 0.28
PKD1-225ENST00000562297 C10orf67Q8IYJ2 551 aa16.81■□□□□ 0.28
PKD1-225ENST00000562297 ARL14EPQ8N8R7 260 aaPredicted RBP16.81■□□□□ 0.28
PKD1-225ENST00000562297 APOPT1Q96IL0 206 aa16.81■□□□□ 0.28
PKD1-225ENST00000562297 C12orf65Q9H3J6 166 aaKnown RBP16.81■□□□□ 0.28
PKD1-225ENST00000562297 ALG13Q9NP73 1137 aaKnown RBP16.81■□□□□ 0.28
PKD1-225ENST00000562297 VPS45Q9NRW7 570 aa16.81■□□□□ 0.28
PKD1-225ENST00000562297 A0A1B0GVM2 712 aa16.8■□□□□ 0.28
PKD1-225ENST00000562297 TCAF2A6NFQ2 919 aa16.8■□□□□ 0.28
PKD1-225ENST00000562297 GFRA2O00451 464 aa16.8■□□□□ 0.28
PKD1-225ENST00000562297 NEBLO76041 1014 aa16.8■□□□□ 0.28
PKD1-225ENST00000562297 ADH1AP07327 375 aa16.8■□□□□ 0.28
PKD1-225ENST00000562297 TAC1P20366 129 aa16.8■□□□□ 0.28
PKD1-225ENST00000562297 DNAJB1P25685 340 aa16.8■□□□□ 0.28
PKD1-225ENST00000562297 CNTFP26441 200 aa16.8■□□□□ 0.28
PKD1-225ENST00000562297 NMBRP28336 390 aa16.8■□□□□ 0.28
PKD1-225ENST00000562297 GBP2P32456 591 aaPredicted RBP16.8■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms