RNA–Protein interactions for RNA: ENST00000561431.1

LRRC28-222, Transcript of leucine rich repeat containing 28, humanhuman

TSL 3

Gene LRRC28, Length 754 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-222ENST00000561431 ABCG4Q9H172 646 aa4.43□□□□□ -1.7
LRRC28-222ENST00000561431 TAOK3Q9H2K8 898 aa4.43□□□□□ -1.7
LRRC28-222ENST00000561431 TP63Q9H3D4 680 aaPredicted RBP4.43□□□□□ -1.7
LRRC28-222ENST00000561431 UNC45AQ9H3U1 944 aa4.43□□□□□ -1.7
LRRC28-222ENST00000561431 CCDC134Q9H6E4 229 aa4.43□□□□□ -1.7
LRRC28-222ENST00000561431 ELAC1Q9H777 363 aaKnown RBP4.43□□□□□ -1.7
LRRC28-222ENST00000561431 DBNDD1Q9H9R9 158 aa4.43□□□□□ -1.7
LRRC28-222ENST00000561431 SAYSD1Q9NPB0 183 aa4.43□□□□□ -1.7
LRRC28-222ENST00000561431 DUSP22Q9NRW4 184 aa4.43□□□□□ -1.7
LRRC28-222ENST00000561431 ANKEF1Q9NU02 776 aa4.43□□□□□ -1.7
LRRC28-222ENST00000561431 SERTAD4Q9NUC0 356 aa4.43□□□□□ -1.7
LRRC28-222ENST00000561431 COMMD8Q9NX08 183 aa4.43□□□□□ -1.7
LRRC28-222ENST00000561431 SYBUQ9NX95 663 aa4.43□□□□□ -1.7
LRRC28-222ENST00000561431 DLL3Q9NYJ7 618 aa4.43□□□□□ -1.7
LRRC28-222ENST00000561431 VPS4AQ9UN37 437 aa4.43□□□□□ -1.7
LRRC28-222ENST00000561431 RABL2BQ9UNT1 228 aa4.43□□□□□ -1.7
LRRC28-222ENST00000561431 PCDHB2Q9Y5E7 798 aa4.43□□□□□ -1.7
LRRC28-222ENST00000561431 MAGED1Q9Y5V3 778 aaPredicted RBP4.43□□□□□ -1.7
LRRC28-222ENST00000561431 CCDC88AQ3V6T2 1871 aa4.43□□□□□ -1.7
LRRC28-222ENST00000561431 ABCC4O15439 1325 aa4.43□□□□□ -1.7
LRRC28-222ENST00000561431 SH3TC1Q8TE82 1336 aa4.43□□□□□ -1.7
LRRC28-222ENST00000561431 WDR27A2RRH5 827 aa4.42□□□□□ -1.7
LRRC28-222ENST00000561431 EFCAB8A8MWE9 144 aa4.42□□□□□ -1.7
LRRC28-222ENST00000561431 M0R3H8 397 aa4.42□□□□□ -1.7
LRRC28-222ENST00000561431 PES1O00541 588 aaKnown RBP4.42□□□□□ -1.7
LRRC28-222ENST00000561431 SPRY2O43597 315 aa4.42□□□□□ -1.7
LRRC28-222ENST00000561431 TAF5LO75529 589 aa4.42□□□□□ -1.7
LRRC28-222ENST00000561431 MBD4O95243 580 aa4.42□□□□□ -1.7
LRRC28-222ENST00000561431 CER1O95813 267 aa4.42□□□□□ -1.7
LRRC28-222ENST00000561431 SLC3A2P08195 630 aaKnown RBP4.42□□□□□ -1.7
LRRC28-222ENST00000561431 MYCLP12524 364 aaPredicted RBP4.42□□□□□ -1.7
LRRC28-222ENST00000561431 TAF1P21675 1872 aa4.42□□□□□ -1.7
LRRC28-222ENST00000561431 MMP8P22894 467 aa4.42□□□□□ -1.7
LRRC28-222ENST00000561431 ALDH1B1P30837 517 aa4.42□□□□□ -1.7
LRRC28-222ENST00000561431 GALNSP34059 522 aa4.42□□□□□ -1.7
LRRC28-222ENST00000561431 HTR7P34969 479 aa4.42□□□□□ -1.7
LRRC28-222ENST00000561431 ADRA1BP35368 520 aa4.42□□□□□ -1.7
LRRC28-222ENST00000561431 AARSP49588 968 aaKnown RBP eCLIP4.42□□□□□ -1.7
LRRC28-222ENST00000561431 COPB1P53618 953 aaKnown RBP4.42□□□□□ -1.7
LRRC28-222ENST00000561431 MPP1Q00013 466 aa4.42□□□□□ -1.7
LRRC28-222ENST00000561431 PPFIA1Q13136 1202 aa4.42□□□□□ -1.7
LRRC28-222ENST00000561431 ZNF169Q14929 603 aaPredicted RBP4.42□□□□□ -1.7
LRRC28-222ENST00000561431 CYP1B1Q16678 543 aa4.42□□□□□ -1.7
LRRC28-222ENST00000561431 AARS2Q5JTZ9 985 aaKnown RBP4.42□□□□□ -1.7
LRRC28-222ENST00000561431 ANKRD40Q6AI12 368 aa4.42□□□□□ -1.7
LRRC28-222ENST00000561431 FAAH2Q6GMR7 532 aa4.42□□□□□ -1.7
LRRC28-222ENST00000561431 CCDC144NLQ6NUI1 221 aa4.42□□□□□ -1.7
LRRC28-222ENST00000561431 JMJD6Q6NYC1 403 aaPredicted RBP4.42□□□□□ -1.7
LRRC28-222ENST00000561431 MTHFD1LQ6UB35 978 aa4.42□□□□□ -1.7
LRRC28-222ENST00000561431 SERPINA13PQ6UXR4 307 aa4.42□□□□□ -1.7
LRRC28-222ENST00000561431 C4orf50Q6ZRC1 276 aa4.42□□□□□ -1.7
LRRC28-222ENST00000561431 RRAGAQ7L523 313 aa4.42□□□□□ -1.7
LRRC28-222ENST00000561431 FASTKD5Q7L8L6 764 aaKnown RBP4.42□□□□□ -1.7
LRRC28-222ENST00000561431 OTUD6AQ7L8S5 288 aa4.42□□□□□ -1.7
LRRC28-222ENST00000561431 ZNF627Q7L945 461 aa4.42□□□□□ -1.7
LRRC28-222ENST00000561431 ZNF804AQ7Z570 1209 aa4.42□□□□□ -1.7
LRRC28-222ENST00000561431 SLC44A2Q8IWA5 706 aaPredicted RBP4.42□□□□□ -1.7
LRRC28-222ENST00000561431 ULK2Q8IYT8 1036 aa4.42□□□□□ -1.7
LRRC28-222ENST00000561431 CAGE1Q8TC20 777 aa4.42□□□□□ -1.7
LRRC28-222ENST00000561431 AFG1LQ8WV93 481 aa4.42□□□□□ -1.7
LRRC28-222ENST00000561431 OVCA2Q8WZ82 227 aa4.42□□□□□ -1.7
LRRC28-222ENST00000561431 CPT1BQ92523 772 aa4.42□□□□□ -1.7
LRRC28-222ENST00000561431 ATP6V1E2Q96A05 226 aa4.42□□□□□ -1.7
LRRC28-222ENST00000561431 GCC1Q96CN9 775 aa4.42□□□□□ -1.7
LRRC28-222ENST00000561431 REXO5Q96IC2 774 aaKnown RBP4.42□□□□□ -1.7
LRRC28-222ENST00000561431 CENPOQ9BU64 300 aa4.42□□□□□ -1.7
LRRC28-222ENST00000561431 DUSP26Q9BV47 211 aa4.42□□□□□ -1.7
LRRC28-222ENST00000561431 TOR3AQ9H497 397 aa4.42□□□□□ -1.7
LRRC28-222ENST00000561431 MLXIPQ9HAP2 919 aa4.42□□□□□ -1.7
LRRC28-222ENST00000561431 CPNE5Q9HCH3 593 aa4.42□□□□□ -1.7
LRRC28-222ENST00000561431 ITM2CQ9NQX7 267 aa4.42□□□□□ -1.7
LRRC28-222ENST00000561431 PDRG1Q9NUG6 133 aa4.42□□□□□ -1.7
LRRC28-222ENST00000561431 KIF17Q9P2E2 1029 aa4.42□□□□□ -1.7
LRRC28-222ENST00000561431 TRMT112Q9UI30 125 aaKnown RBP4.42□□□□□ -1.7
LRRC28-222ENST00000561431 PACSIN3Q9UKS6 424 aa4.42□□□□□ -1.7
LRRC28-222ENST00000561431 BAG5Q9UL15 447 aa4.42□□□□□ -1.7
LRRC28-222ENST00000561431 NFU1Q9UMS0 254 aa4.42□□□□□ -1.7
LRRC28-222ENST00000561431 PCDHB7Q9Y5E2 793 aa4.42□□□□□ -1.7
LRRC28-222ENST00000561431 SALL3Q9BXA9 1300 aa4.42□□□□□ -1.7
LRRC28-222ENST00000561431 ZNF541Q9H0D2 1346 aa4.42□□□□□ -1.7
LRRC28-222ENST00000561431 GRID2IPA4D2P6 1211 aa4.41□□□□□ -1.7
LRRC28-222ENST00000561431 PI4KAP2A4QPH2 592 aa4.41□□□□□ -1.7
LRRC28-222ENST00000561431 OR2W5A6NFC9 320 aa4.41□□□□□ -1.7
LRRC28-222ENST00000561431 GLTPD2A6NH11 291 aa4.41□□□□□ -1.7
LRRC28-222ENST00000561431 KIF28PB7ZC32 967 aa4.41□□□□□ -1.7
LRRC28-222ENST00000561431 H0YIZ8 118 aa4.41□□□□□ -1.7
LRRC28-222ENST00000561431 IPO8O15397 1037 aaKnown RBP4.41□□□□□ -1.7
LRRC28-222ENST00000561431 KIF5CO60282 957 aa4.41□□□□□ -1.7
LRRC28-222ENST00000561431 KRT38O76015 456 aa4.41□□□□□ -1.7
LRRC28-222ENST00000561431 GFPT2O94808 682 aa4.41□□□□□ -1.7
LRRC28-222ENST00000561431 DDX58O95786 925 aaKnown RBP4.41□□□□□ -1.7
LRRC28-222ENST00000561431 PCCAP05165 728 aaPredicted RBP4.41□□□□□ -1.7
LRRC28-222ENST00000561431 ALADP13716 330 aa4.41□□□□□ -1.7
LRRC28-222ENST00000561431 JUPP14923 745 aa4.41□□□□□ -1.7
LRRC28-222ENST00000561431 CTNNA1P35221 906 aaKnown RBP4.41□□□□□ -1.7
LRRC28-222ENST00000561431 THBS4P35443 961 aa4.41□□□□□ -1.7
LRRC28-222ENST00000561431 ARL4CP56559 192 aa4.41□□□□□ -1.7
LRRC28-222ENST00000561431 CCDC15Q0P6D6 951 aa4.41□□□□□ -1.7
LRRC28-222ENST00000561431 G3BP1Q13283 466 aaKnown RBP eCLIP4.41□□□□□ -1.7
LRRC28-222ENST00000561431 GRAPQ13588 217 aa4.41□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms