RNA–Protein interactions for RNA: ENST00000560089.5

SEMA4B-215, Transcript of semaphorin 4B, humanhuman

TSL 1 (best)

Gene SEMA4B, Length 2,804 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4B-215ENST00000560089 AGPAT3Q9NRZ7 376 aa19.44■□□□□ 0.7
SEMA4B-215ENST00000560089 PCDHA1Q9Y5I3 950 aa19.44■□□□□ 0.7
SEMA4B-215ENST00000560089 SMCHD1A6NHR9 2005 aa19.43■□□□□ 0.7
SEMA4B-215ENST00000560089 EIF3DO15371 548 aaKnown RBP eCLIP19.43■□□□□ 0.7
SEMA4B-215ENST00000560089 CAPN1P07384 714 aa19.43■□□□□ 0.7
SEMA4B-215ENST00000560089 CDC20Q12834 499 aa19.43■□□□□ 0.7
SEMA4B-215ENST00000560089 TRIM32Q13049 653 aa19.43■□□□□ 0.7
SEMA4B-215ENST00000560089 ART3Q13508 389 aa19.43■□□□□ 0.7
SEMA4B-215ENST00000560089 C6orf10Q5SRN2 563 aa19.43■□□□□ 0.7
SEMA4B-215ENST00000560089 MFSD7Q6UXD7 560 aa19.43■□□□□ 0.7
SEMA4B-215ENST00000560089 PRR23BQ6ZRT6 265 aa19.43■□□□□ 0.7
SEMA4B-215ENST00000560089 GLRX5Q86SX6 157 aa19.43■□□□□ 0.7
SEMA4B-215ENST00000560089 COLGALT2Q8IYK4 626 aa19.43■□□□□ 0.7
SEMA4B-215ENST00000560089 MCOLN2Q8IZK6 566 aa19.43■□□□□ 0.7
SEMA4B-215ENST00000560089 MYCT1Q8N699 235 aa19.43■□□□□ 0.7
SEMA4B-215ENST00000560089 GMCL1P1Q8NEA9 526 aa19.43■□□□□ 0.7
SEMA4B-215ENST00000560089 TRIM63Q969Q1 353 aa19.43■□□□□ 0.7
SEMA4B-215ENST00000560089 KREMEN1Q96MU8 473 aa19.43■□□□□ 0.7
SEMA4B-215ENST00000560089 STAU2Q9NUL3 570 aaKnown RBP eCLIP19.43■□□□□ 0.7
SEMA4B-215ENST00000560089 TMX2Q9Y320 296 aa19.43■□□□□ 0.7
SEMA4B-215ENST00000560089 POLR2AP24928 1970 aaKnown RBP19.43■□□□□ 0.7
SEMA4B-215ENST00000560089 PIK3R2O00459 728 aa19.43■□□□□ 0.7
SEMA4B-215ENST00000560089 PHGDHO43175 533 aaKnown RBP19.43■□□□□ 0.7
SEMA4B-215ENST00000560089 CLIC3O95833 236 aa19.43■□□□□ 0.7
SEMA4B-215ENST00000560089 KRT1P04264 644 aa19.43■□□□□ 0.7
SEMA4B-215ENST00000560089 YAP1P46937 504 aaKnown RBP19.43■□□□□ 0.7
SEMA4B-215ENST00000560089 TNK2Q07912 1038 aa19.43■□□□□ 0.7
SEMA4B-215ENST00000560089 SLC10A2Q12908 348 aaPredicted RBP19.43■□□□□ 0.7
SEMA4B-215ENST00000560089 GJC2Q5T442 439 aaPredicted RBP19.43■□□□□ 0.7
SEMA4B-215ENST00000560089 HMBOX1Q6NT76 420 aa19.43■□□□□ 0.7
SEMA4B-215ENST00000560089 ABRAXAS1Q6UWZ7 409 aa19.43■□□□□ 0.7
SEMA4B-215ENST00000560089 CYGBQ8WWM9 190 aa19.43■□□□□ 0.7
SEMA4B-215ENST00000560089 SLITRK1Q96PX8 696 aa19.43■□□□□ 0.7
SEMA4B-215ENST00000560089 SORT1Q99523 831 aa19.43■□□□□ 0.7
SEMA4B-215ENST00000560089 TRIM39Q9HCM9 518 aa19.43■□□□□ 0.7
SEMA4B-215ENST00000560089 C20orf96Q9NUD7 363 aaPredicted RBP19.43■□□□□ 0.7
SEMA4B-215ENST00000560089 MAU2Q9Y6X3 613 aa19.43■□□□□ 0.7
SEMA4B-215ENST00000560089 CCNKO75909 580 aa19.43■□□□□ 0.7
SEMA4B-215ENST00000560089 CPNE6O95741 557 aa19.43■□□□□ 0.7
SEMA4B-215ENST00000560089 TMEM191BP0C7N4 346 aa19.43■□□□□ 0.7
SEMA4B-215ENST00000560089 PTGS2P35354 604 aa19.43■□□□□ 0.7
SEMA4B-215ENST00000560089 PPP3CAQ08209 521 aa19.43■□□□□ 0.7
SEMA4B-215ENST00000560089 GALNT1Q10472 559 aaPredicted RBP19.43■□□□□ 0.7
SEMA4B-215ENST00000560089 MERTKQ12866 999 aa19.43■□□□□ 0.7
SEMA4B-215ENST00000560089 SLC13A2Q13183 592 aa19.43■□□□□ 0.7
SEMA4B-215ENST00000560089 EPC2Q52LR7 807 aa19.43■□□□□ 0.7
SEMA4B-215ENST00000560089 GALNT6Q8NCL4 622 aa19.43■□□□□ 0.7
SEMA4B-215ENST00000560089 NKD2Q969F2 451 aaPredicted RBP19.43■□□□□ 0.7
SEMA4B-215ENST00000560089 NRBF2Q96F24 287 aa19.43■□□□□ 0.7
SEMA4B-215ENST00000560089 COPG2Q9UBF2 871 aa19.43■□□□□ 0.7
SEMA4B-215ENST00000560089 EIF3LQ9Y262 564 aaKnown RBP19.43■□□□□ 0.7
SEMA4B-215ENST00000560089 SAC3D1A6NKF1 404 aa19.42■□□□□ 0.7
SEMA4B-215ENST00000560089 CXorf49A8MYA2 514 aaPredicted RBP19.42■□□□□ 0.7
SEMA4B-215ENST00000560089 FAM13AO94988 1023 aa19.42■□□□□ 0.7
SEMA4B-215ENST00000560089 SERPINE1P05121 402 aa19.42■□□□□ 0.7
SEMA4B-215ENST00000560089 ASNSP08243 561 aa19.42■□□□□ 0.7
SEMA4B-215ENST00000560089 GARTP22102 1010 aa19.42■□□□□ 0.7
SEMA4B-215ENST00000560089 FCHO2Q0JRZ9 810 aa19.42■□□□□ 0.7
SEMA4B-215ENST00000560089 ATG14Q6ZNE5 492 aa19.42■□□□□ 0.7
SEMA4B-215ENST00000560089 FKBP9P1Q75LS8 142 aa19.42■□□□□ 0.7
SEMA4B-215ENST00000560089 TPH2Q8IWU9 490 aa19.42■□□□□ 0.7
SEMA4B-215ENST00000560089 RCOR2Q8IZ40 523 aa19.42■□□□□ 0.7
SEMA4B-215ENST00000560089 MRPL9Q9BYD2 267 aaKnown RBP19.42■□□□□ 0.7
SEMA4B-215ENST00000560089 CNTNAP2Q9UHC6 1331 aa19.42■□□□□ 0.7
SEMA4B-215ENST00000560089 LRRIQ4A6NIV6 560 aa19.42■□□□□ 0.7
SEMA4B-215ENST00000560089 EVPLLA8MZ36 301 aa19.42■□□□□ 0.7
SEMA4B-215ENST00000560089 POLR1CO15160 346 aaPredicted RBP19.42■□□□□ 0.7
SEMA4B-215ENST00000560089 ZW10O43264 779 aa19.42■□□□□ 0.7
SEMA4B-215ENST00000560089 MTSS1O43312 755 aa19.42■□□□□ 0.7
SEMA4B-215ENST00000560089 SEC14L2O76054 403 aa19.42■□□□□ 0.7
SEMA4B-215ENST00000560089 IL18RAPO95256 599 aa19.42■□□□□ 0.7
SEMA4B-215ENST00000560089 GDF10P55107 478 aa19.42■□□□□ 0.7
SEMA4B-215ENST00000560089 ADGRF2Q8IZF7 708 aa19.42■□□□□ 0.7
SEMA4B-215ENST00000560089 DTX3Q8N9I9 347 aa19.42■□□□□ 0.7
SEMA4B-215ENST00000560089 DPF3Q92784 378 aa19.42■□□□□ 0.7
SEMA4B-215ENST00000560089 GMCL1Q96IK5 515 aa19.42■□□□□ 0.7
SEMA4B-215ENST00000560089 PSKH2Q96QS6 385 aa19.42■□□□□ 0.7
SEMA4B-215ENST00000560089 SP140LQ9H930 580 aa19.42■□□□□ 0.7
SEMA4B-215ENST00000560089 COG4Q9H9E3 785 aa19.42■□□□□ 0.7
SEMA4B-215ENST00000560089 DMAC2Q9NW81 257 aa19.42■□□□□ 0.7
SEMA4B-215ENST00000560089 PKD2L2Q9NZM6 624 aa19.42■□□□□ 0.7
SEMA4B-215ENST00000560089 PKD2L1Q9P0L9 805 aa19.42■□□□□ 0.7
SEMA4B-215ENST00000560089 GMIPQ9P107 970 aa19.42■□□□□ 0.7
SEMA4B-215ENST00000560089 UBA2Q9UBT2 640 aaPredicted RBP19.42■□□□□ 0.7
SEMA4B-215ENST00000560089 PRR12Q9ULL5 1215 aa19.42■□□□□ 0.7
SEMA4B-215ENST00000560089 CAB39Q9Y376 341 aaPredicted RBP19.42■□□□□ 0.7
SEMA4B-215ENST00000560089 RNF103O00237 685 aa19.41■□□□□ 0.7
SEMA4B-215ENST00000560089 VAPBO95292 243 aa19.41■□□□□ 0.7
SEMA4B-215ENST00000560089 CCND2P30279 289 aa19.41■□□□□ 0.7
SEMA4B-215ENST00000560089 POLR2IP36954 125 aaKnown RBP19.41■□□□□ 0.7
SEMA4B-215ENST00000560089 SLC9B1Q4ZJI4 515 aa19.41■□□□□ 0.7
SEMA4B-215ENST00000560089 PLA2G4FQ68DD2 849 aa19.41■□□□□ 0.7
SEMA4B-215ENST00000560089 OFCC1Q8IZS5 231 aa19.41■□□□□ 0.7
SEMA4B-215ENST00000560089 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP19.41■□□□□ 0.7
SEMA4B-215ENST00000560089 CPA5Q8WXQ8 436 aa19.41■□□□□ 0.7
SEMA4B-215ENST00000560089 APBB2Q92870 758 aa19.41■□□□□ 0.7
SEMA4B-215ENST00000560089 FBXL20Q96IG2 436 aa19.41■□□□□ 0.7
SEMA4B-215ENST00000560089 ZNF560Q96MR9 790 aa19.41■□□□□ 0.7
SEMA4B-215ENST00000560089 DDX28Q9NUL7 540 aaKnown RBP19.41■□□□□ 0.7
SEMA4B-215ENST00000560089 ADA2Q9NZK5 511 aa19.41■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms