RNA–Protein interactions for RNA: ENST00000559866.1

AC243562.3-201, humanhuman

TSL 1 (best) BASIC

Gene AC243562.3, Length 1,212 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC243562.3-201ENST00000559866 SMAD6O43541 496 aaKnown RBP15.98■□□□□ 0.15
AC243562.3-201ENST00000559866 NOBOXO60393 691 aa15.98■□□□□ 0.15
AC243562.3-201ENST00000559866 SNAP91O60641 907 aa15.98■□□□□ 0.15
AC243562.3-201ENST00000559866 CSF2P04141 144 aa15.98■□□□□ 0.15
AC243562.3-201ENST00000559866 NME1P15531 152 aaKnown RBP15.98■□□□□ 0.15
AC243562.3-201ENST00000559866 PPP1R2P41236 205 aa15.98■□□□□ 0.15
AC243562.3-201ENST00000559866 GPD2P43304 727 aa15.98■□□□□ 0.15
AC243562.3-201ENST00000559866 DUSP3P51452 185 aaPredicted RBP15.98■□□□□ 0.15
AC243562.3-201ENST00000559866 PMS1P54277 932 aaKnown RBP15.98■□□□□ 0.15
AC243562.3-201ENST00000559866 DENND1BQ6P3S1 775 aa15.98■□□□□ 0.15
AC243562.3-201ENST00000559866 RBM44Q6ZP01 1051 aaKnown RBP15.98■□□□□ 0.15
AC243562.3-201ENST00000559866 RBFAQ8N0V3 343 aa15.98■□□□□ 0.15
AC243562.3-201ENST00000559866 EXTL1Q92935 676 aa15.98■□□□□ 0.15
AC243562.3-201ENST00000559866 IFT43Q96FT9 208 aa15.98■□□□□ 0.15
AC243562.3-201ENST00000559866 CCNL2Q96S94 520 aaPredicted RBP15.98■□□□□ 0.15
AC243562.3-201ENST00000559866 DUSP23Q9BVJ7 150 aa15.98■□□□□ 0.15
AC243562.3-201ENST00000559866 FAM117AQ9C073 453 aa15.98■□□□□ 0.15
AC243562.3-201ENST00000559866 USP29Q9HBJ7 922 aa15.98■□□□□ 0.15
AC243562.3-201ENST00000559866 GDPD2Q9HCC8 539 aa15.98■□□□□ 0.15
AC243562.3-201ENST00000559866 ST7Q9NRC1 585 aa15.98■□□□□ 0.15
AC243562.3-201ENST00000559866 STARD5Q9NSY2 213 aa15.98■□□□□ 0.15
AC243562.3-201ENST00000559866 SYNJ2BP-COX16A0A087WUM0 186 aa15.97■□□□□ 0.15
AC243562.3-201ENST00000559866 SPTY2D1-AS1A0A0U1RR47 76 aa15.97■□□□□ 0.15
AC243562.3-201ENST00000559866 NEMP2A6NFY4 417 aa15.97■□□□□ 0.15
AC243562.3-201ENST00000559866 PCDH8O95206 1070 aa15.97■□□□□ 0.15
AC243562.3-201ENST00000559866 CHRNA3P32297 505 aa15.97■□□□□ 0.15
AC243562.3-201ENST00000559866 ACADSBP45954 432 aa15.97■□□□□ 0.15
AC243562.3-201ENST00000559866 HNRNPKP61978 463 aaKnown RBP eCLIP15.97■□□□□ 0.15
AC243562.3-201ENST00000559866 NEK5Q6P3R8 708 aa15.97■□□□□ 0.15
AC243562.3-201ENST00000559866 KYAT3Q6YP21 454 aaKnown RBP15.97■□□□□ 0.15
AC243562.3-201ENST00000559866 B3GNT8Q7Z7M8 397 aa15.97■□□□□ 0.15
AC243562.3-201ENST00000559866 C14orf80Q86SX3 495 aa15.97■□□□□ 0.15
AC243562.3-201ENST00000559866 ARHGEF19Q8IW93 802 aa15.97■□□□□ 0.15
AC243562.3-201ENST00000559866 GRIN3AQ8TCU5 1115 aa15.97■□□□□ 0.15
AC243562.3-201ENST00000559866 CEP63Q96MT8 703 aa15.97■□□□□ 0.15
AC243562.3-201ENST00000559866 RPRD1AQ96P16 312 aaPredicted RBP15.97■□□□□ 0.15
AC243562.3-201ENST00000559866 COX16Q9P0S2 106 aa15.97■□□□□ 0.15
AC243562.3-201ENST00000559866 VPS28Q9UK41 221 aa15.97■□□□□ 0.15
AC243562.3-201ENST00000559866 ATXN7L1Q9ULK2 861 aaPredicted RBP15.97■□□□□ 0.15
AC243562.3-201ENST00000559866 VANGL2Q9ULK5 521 aa15.97■□□□□ 0.15
AC243562.3-201ENST00000559866 HEMK1Q9Y5R4 338 aaPredicted RBP15.97■□□□□ 0.15
AC243562.3-201ENST00000559866 E5RJQ4 531 aa15.96■□□□□ 0.15
AC243562.3-201ENST00000559866 MUSKO15146 869 aa15.96■□□□□ 0.15
AC243562.3-201ENST00000559866 PMM2O15305 246 aa15.96■□□□□ 0.15
AC243562.3-201ENST00000559866 P4HA2O15460 535 aa15.96■□□□□ 0.15
AC243562.3-201ENST00000559866 AQP9O43315 295 aa15.96■□□□□ 0.15
AC243562.3-201ENST00000559866 GCATO75600 419 aa15.96■□□□□ 0.15
AC243562.3-201ENST00000559866 CNTN5O94779 1100 aa15.96■□□□□ 0.15
AC243562.3-201ENST00000559866 FAM87AP0C7U9 286 aa15.96■□□□□ 0.15
AC243562.3-201ENST00000559866 RRM1P23921 792 aa15.96■□□□□ 0.15
AC243562.3-201ENST00000559866 GCNT1Q02742 428 aa15.96■□□□□ 0.15
AC243562.3-201ENST00000559866 EIF2B5Q13144 721 aaKnown RBP15.96■□□□□ 0.15
AC243562.3-201ENST00000559866 MAPK8IP2Q13387 824 aaPredicted RBP15.96■□□□□ 0.15
AC243562.3-201ENST00000559866 TTC39BQ5VTQ0 682 aaPredicted RBP15.96■□□□□ 0.15
AC243562.3-201ENST00000559866 LINGO4Q6UY18 593 aa15.96■□□□□ 0.15
AC243562.3-201ENST00000559866 BEND5Q7L4P6 421 aa15.96■□□□□ 0.15
AC243562.3-201ENST00000559866 PARGQ86W56 976 aa15.96■□□□□ 0.15
AC243562.3-201ENST00000559866 SLC35F3Q8IY50 421 aa15.96■□□□□ 0.15
AC243562.3-201ENST00000559866 FMR1NBQ8N0W7 255 aaPredicted RBP15.96■□□□□ 0.15
AC243562.3-201ENST00000559866 ATP6V0D2Q8N8Y2 350 aa15.96■□□□□ 0.15
AC243562.3-201ENST00000559866 WDR36Q8NI36 951 aaKnown RBP15.96■□□□□ 0.15
AC243562.3-201ENST00000559866 LMO3Q8TAP4 145 aa15.96■□□□□ 0.15
AC243562.3-201ENST00000559866 LMX1AQ8TE12 382 aa15.96■□□□□ 0.15
AC243562.3-201ENST00000559866 CCDC97Q96F63 343 aaPredicted RBP15.96■□□□□ 0.15
AC243562.3-201ENST00000559866 DHTKD1Q96HY7 919 aaPredicted RBP15.96■□□□□ 0.15
AC243562.3-201ENST00000559866 KLF6Q99612 283 aaPredicted RBP15.96■□□□□ 0.15
AC243562.3-201ENST00000559866 TNKS2Q9H2K2 1166 aa15.96■□□□□ 0.15
AC243562.3-201ENST00000559866 WDR70Q9NW82 654 aa15.96■□□□□ 0.15
AC243562.3-201ENST00000559866 SLC12A6Q9UHW9 1150 aa15.96■□□□□ 0.15
AC243562.3-201ENST00000559866 VPS51Q9UID3 782 aa15.96■□□□□ 0.15
AC243562.3-201ENST00000559866 HS3ST2Q9Y278 367 aa15.96■□□□□ 0.15
AC243562.3-201ENST00000559866 SPENQ96T58 3664 aaKnown RBP15.96■□□□□ 0.14
AC243562.3-201ENST00000559866 FLNCQ14315 2725 aa15.95■□□□□ 0.14
AC243562.3-201ENST00000559866 SUV39H1O43463 412 aa15.95■□□□□ 0.14
AC243562.3-201ENST00000559866 MED7O43513 233 aa15.95■□□□□ 0.14
AC243562.3-201ENST00000559866 PAK4O96013 591 aaPredicted RBP15.95■□□□□ 0.14
AC243562.3-201ENST00000559866 ITGA2BP08514 1039 aa15.95■□□□□ 0.14
AC243562.3-201ENST00000559866 HGFP14210 728 aa15.95■□□□□ 0.14
AC243562.3-201ENST00000559866 WT1P19544 449 aaPredicted RBP15.95■□□□□ 0.14
AC243562.3-201ENST00000559866 C1orf61Q13536 156 aa15.95■□□□□ 0.14
AC243562.3-201ENST00000559866 AUHQ13825 339 aaKnown RBP15.95■□□□□ 0.14
AC243562.3-201ENST00000559866 NR0B2Q15466 257 aa15.95■□□□□ 0.14
AC243562.3-201ENST00000559866 ARSIQ5FYB1 569 aa15.95■□□□□ 0.14
AC243562.3-201ENST00000559866 RABGAP1LQ5R372 815 aa15.95■□□□□ 0.14
AC243562.3-201ENST00000559866 ERN2Q76MJ5 926 aaKnown RBP15.95■□□□□ 0.14
AC243562.3-201ENST00000559866 RRAGAQ7L523 313 aa15.95■□□□□ 0.14
AC243562.3-201ENST00000559866 ARL14Q8N4G2 192 aa15.95■□□□□ 0.14
AC243562.3-201ENST00000559866 BOCQ9BWV1 1114 aa15.95■□□□□ 0.14
AC243562.3-201ENST00000559866 SLC4A5Q9BY07 1137 aa15.95■□□□□ 0.14
AC243562.3-201ENST00000559866 POPDC2Q9HBU9 364 aa15.95■□□□□ 0.14
AC243562.3-201ENST00000559866 ANLNQ9NQW6 1124 aa15.95■□□□□ 0.14
AC243562.3-201ENST00000559866 SLTMQ9NWH9 1034 aaKnown RBP eCLIP15.95■□□□□ 0.14
AC243562.3-201ENST00000559866 GGT7Q9UJ14 662 aa15.95■□□□□ 0.14
AC243562.3-201ENST00000559866 RABGEF1Q9UJ41 708 aa15.95■□□□□ 0.14
AC243562.3-201ENST00000559866 SALL4Q9UJQ4 1053 aa15.95■□□□□ 0.14
AC243562.3-201ENST00000559866 HS3ST4Q9Y661 456 aa15.95■□□□□ 0.14
AC243562.3-201ENST00000559866 WASF2Q9Y6W5 498 aa15.95■□□□□ 0.14
AC243562.3-201ENST00000559866 SPTA1P02549 2419 aa15.94■□□□□ 0.14
AC243562.3-201ENST00000559866 CCDC187A0A096LP49 1063 aa15.94■□□□□ 0.14
AC243562.3-201ENST00000559866 I6L893 689 aaPredicted RBP15.94■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms