RNA–Protein interactions for RNA: ENST00000558020.1

SNRPA1-204, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 3

Gene SNRPA1, Length 466 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-204ENST00000558020 DNAJC3Q13217 504 aa13.9□□□□□ -0.18
SNRPA1-204ENST00000558020 ZNF211Q13398 564 aaPredicted RBP13.9□□□□□ -0.18
SNRPA1-204ENST00000558020 CAMK2BQ13554 666 aa13.9□□□□□ -0.18
SNRPA1-204ENST00000558020 PIP5KL1Q5T9C9 394 aa13.9□□□□□ -0.18
SNRPA1-204ENST00000558020 SFMBT2Q5VUG0 894 aa13.9□□□□□ -0.18
SNRPA1-204ENST00000558020 C22orf39Q6P5X5 142 aa13.9□□□□□ -0.18
SNRPA1-204ENST00000558020 C19orf48Q6RUI8 117 aa13.9□□□□□ -0.18
SNRPA1-204ENST00000558020 TRIM72Q6ZMU5 477 aa13.9□□□□□ -0.18
SNRPA1-204ENST00000558020 ZSCAN30Q86W11 494 aa13.9□□□□□ -0.18
SNRPA1-204ENST00000558020 FAM131BQ86XD5 332 aa13.9□□□□□ -0.18
SNRPA1-204ENST00000558020 PCDH20Q8N6Y1 951 aaKnown RBP13.9□□□□□ -0.18
SNRPA1-204ENST00000558020 ANKRD20A12PQ8NF67 263 aa13.9□□□□□ -0.18
SNRPA1-204ENST00000558020 ENOX1Q8TC92 643 aaKnown RBP13.9□□□□□ -0.18
SNRPA1-204ENST00000558020 EPS8L1Q8TE68 723 aa13.9□□□□□ -0.18
SNRPA1-204ENST00000558020 TSC1Q92574 1164 aa13.9□□□□□ -0.18
SNRPA1-204ENST00000558020 NXPE2Q96DL1 559 aa13.9□□□□□ -0.18
SNRPA1-204ENST00000558020 TNKS2Q9H2K2 1166 aa13.9□□□□□ -0.18
SNRPA1-204ENST00000558020 KLHL11Q9NVR0 708 aa13.9□□□□□ -0.18
SNRPA1-204ENST00000558020 RAXQ9Y2V3 346 aa13.9□□□□□ -0.18
SNRPA1-204ENST00000558020 SNX10Q9Y5X0 201 aa13.9□□□□□ -0.18
SNRPA1-204ENST00000558020 NYNRINQ9P2P1 1898 aaKnown RBP13.9□□□□□ -0.18
SNRPA1-204ENST00000558020 ITPR1Q14643 2758 aa13.9□□□□□ -0.18
SNRPA1-204ENST00000558020 ACACAQ13085 2346 aa13.9□□□□□ -0.18
SNRPA1-204ENST00000558020 KNTC1P50748 2209 aa13.9□□□□□ -0.18
SNRPA1-204ENST00000558020 NEMP2A6NFY4 417 aa13.89□□□□□ -0.19
SNRPA1-204ENST00000558020 I6L893 689 aaPredicted RBP13.89□□□□□ -0.19
SNRPA1-204ENST00000558020 LEFTY1O75610 366 aa13.89□□□□□ -0.19
SNRPA1-204ENST00000558020 GFPT2O94808 682 aa13.89□□□□□ -0.19
SNRPA1-204ENST00000558020 CTSLP07711 333 aa13.89□□□□□ -0.19
SNRPA1-204ENST00000558020 MMP8P22894 467 aa13.89□□□□□ -0.19
SNRPA1-204ENST00000558020 ADRA1BP35368 520 aa13.89□□□□□ -0.19
SNRPA1-204ENST00000558020 ACADVLP49748 655 aa13.89□□□□□ -0.19
SNRPA1-204ENST00000558020 SERPINH1P50454 418 aaKnown RBP13.89□□□□□ -0.19
SNRPA1-204ENST00000558020 NEK3P51956 506 aa13.89□□□□□ -0.19
SNRPA1-204ENST00000558020 POLD3Q15054 466 aaPredicted RBP13.89□□□□□ -0.19
SNRPA1-204ENST00000558020 SYCP1Q15431 976 aa13.89□□□□□ -0.19
SNRPA1-204ENST00000558020 ZNF284Q2VY69 593 aa13.89□□□□□ -0.19
SNRPA1-204ENST00000558020 C2CD6Q53TS8 623 aa13.89□□□□□ -0.19
SNRPA1-204ENST00000558020 CARD16Q5EG05 197 aa13.89□□□□□ -0.19
SNRPA1-204ENST00000558020 DPY19L3Q6ZPD9 716 aa13.89□□□□□ -0.19
SNRPA1-204ENST00000558020 PLPP6Q8IY26 295 aa13.89□□□□□ -0.19
SNRPA1-204ENST00000558020 DRC7Q8IY82 874 aa13.89□□□□□ -0.19
SNRPA1-204ENST00000558020 TMEM145Q8NBT3 493 aa13.89□□□□□ -0.19
SNRPA1-204ENST00000558020 CHST14Q8NCH0 376 aa13.89□□□□□ -0.19
SNRPA1-204ENST00000558020 OR7D4Q8NG98 312 aa13.89□□□□□ -0.19
SNRPA1-204ENST00000558020 GRIN3AQ8TCU5 1115 aa13.89□□□□□ -0.19
SNRPA1-204ENST00000558020 HNRNPLLQ8WVV9 542 aaKnown RBP13.89□□□□□ -0.19
SNRPA1-204ENST00000558020 ISG20Q96AZ6 181 aaKnown RBP13.89□□□□□ -0.19
SNRPA1-204ENST00000558020 IFT43Q96FT9 208 aa13.89□□□□□ -0.19
SNRPA1-204ENST00000558020 LRIG1Q96JA1 1093 aa13.89□□□□□ -0.19
SNRPA1-204ENST00000558020 HEPHQ9BQS7 1158 aa13.89□□□□□ -0.19
SNRPA1-204ENST00000558020 OSBPL2Q9H1P3 480 aa13.89□□□□□ -0.19
SNRPA1-204ENST00000558020 VPS16Q9H269 839 aa13.89□□□□□ -0.19
SNRPA1-204ENST00000558020 EVA1BQ9NVM1 165 aa13.89□□□□□ -0.19
SNRPA1-204ENST00000558020 TAB2Q9NYJ8 693 aa13.89□□□□□ -0.19
SNRPA1-204ENST00000558020 HS3ST3A1Q9Y663 406 aa13.89□□□□□ -0.19
SNRPA1-204ENST00000558020 AK5Q9Y6K8 562 aa13.89□□□□□ -0.19
SNRPA1-204ENST00000558020 CACNA1GO43497 2377 aa13.89□□□□□ -0.19
SNRPA1-204ENST00000558020 ALPPL2P10696 532 aa13.88□□□□□ -0.19
SNRPA1-204ENST00000558020 PRLRP16471 622 aa13.88□□□□□ -0.19
SNRPA1-204ENST00000558020 RHOQP17081 205 aa13.88□□□□□ -0.19
SNRPA1-204ENST00000558020 ITGB7P26010 798 aa13.88□□□□□ -0.19
SNRPA1-204ENST00000558020 L1CAMP32004 1257 aa13.88□□□□□ -0.19
SNRPA1-204ENST00000558020 SOX5P35711 763 aa13.88□□□□□ -0.19
SNRPA1-204ENST00000558020 STAT1P42224 750 aa13.88□□□□□ -0.19
SNRPA1-204ENST00000558020 MAPKAPK2P49137 400 aa13.88□□□□□ -0.19
SNRPA1-204ENST00000558020 POLR2FP61218 127 aaKnown RBP13.88□□□□□ -0.19
SNRPA1-204ENST00000558020 NRG1Q02297 640 aaPredicted RBP13.88□□□□□ -0.19
SNRPA1-204ENST00000558020 TARDBPQ13148 414 aaKnown RBP eCLIP13.88□□□□□ -0.19
SNRPA1-204ENST00000558020 SGCGQ13326 291 aa13.88□□□□□ -0.19
SNRPA1-204ENST00000558020 KIAA1161Q6NSJ0 714 aa13.88□□□□□ -0.19
SNRPA1-204ENST00000558020 RWDD4Q6NW29 188 aaKnown RBP13.88□□□□□ -0.19
SNRPA1-204ENST00000558020 STRADAQ7RTN6 431 aa13.88□□□□□ -0.19
SNRPA1-204ENST00000558020 BNIPLQ7Z465 357 aa13.88□□□□□ -0.19
SNRPA1-204ENST00000558020 MARCH9Q86YJ5 346 aa13.88□□□□□ -0.19
SNRPA1-204ENST00000558020 CACTIN-AS1Q8N1I8 211 aa13.88□□□□□ -0.19
SNRPA1-204ENST00000558020 RYBPQ8N488 228 aaPredicted RBP13.88□□□□□ -0.19
SNRPA1-204ENST00000558020 RXFP2Q8WXD0 754 aa13.88□□□□□ -0.19
SNRPA1-204ENST00000558020 KLK6Q92876 244 aa13.88□□□□□ -0.19
SNRPA1-204ENST00000558020 RAB7BQ96AH8 199 aa13.88□□□□□ -0.19
SNRPA1-204ENST00000558020 ARRDC3Q96B67 414 aa13.88□□□□□ -0.19
SNRPA1-204ENST00000558020 PCMTD1Q96MG8 357 aaPredicted RBP13.88□□□□□ -0.19
SNRPA1-204ENST00000558020 CALN1Q9BXU9 219 aa13.88□□□□□ -0.19
SNRPA1-204ENST00000558020 SLC17A9Q9BYT1 436 aa13.88□□□□□ -0.19
SNRPA1-204ENST00000558020 MAGEH1Q9H213 219 aa13.88□□□□□ -0.19
SNRPA1-204ENST00000558020 METTL5Q9NRN9 209 aaKnown RBP13.88□□□□□ -0.19
SNRPA1-204ENST00000558020 TMPRSS4Q9NRS4 437 aa13.88□□□□□ -0.19
SNRPA1-204ENST00000558020 FAM207AQ9NSI2 230 aaPredicted RBP13.88□□□□□ -0.19
SNRPA1-204ENST00000558020 HECAQ9UBI9 543 aaPredicted RBP13.88□□□□□ -0.19
SNRPA1-204ENST00000558020 NOCTQ9UK39 431 aaKnown RBP13.88□□□□□ -0.19
SNRPA1-204ENST00000558020 TP53BP1Q12888 1972 aaPredicted RBP13.88□□□□□ -0.19
SNRPA1-204ENST00000558020 URB1O60287 2271 aaKnown RBP13.87□□□□□ -0.19
SNRPA1-204ENST00000558020 ANKRD62A6NC57 917 aa13.87□□□□□ -0.19
SNRPA1-204ENST00000558020 A6NNZ2 444 aa13.87□□□□□ -0.19
SNRPA1-204ENST00000558020 NEMP1O14524 444 aa13.87□□□□□ -0.19
SNRPA1-204ENST00000558020 TSPAN6O43657 245 aa13.87□□□□□ -0.19
SNRPA1-204ENST00000558020 SDC3O75056 442 aa13.87□□□□□ -0.19
SNRPA1-204ENST00000558020 ZMPSTE24O75844 475 aa13.87□□□□□ -0.19
SNRPA1-204ENST00000558020 CYP1A1P04798 512 aaPredicted RBP13.87□□□□□ -0.19
SNRPA1-204ENST00000558020 KRT3P12035 628 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms