RNA–Protein interactions for RNA: ENST00000557311.5

ATXN3-247, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 562 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-247ENST00000557311 NTRK1P04629 796 aa5.13□□□□□ -1.59
ATXN3-247ENST00000557311 HLA-EP13747 358 aa5.13□□□□□ -1.59
ATXN3-247ENST00000557311 HOXB2P14652 356 aa5.13□□□□□ -1.59
ATXN3-247ENST00000557311 ITPKBP27987 946 aa5.13□□□□□ -1.59
ATXN3-247ENST00000557311 CD6P30203 668 aa5.13□□□□□ -1.59
ATXN3-247ENST00000557311 NTSR1P30989 418 aa5.13□□□□□ -1.59
ATXN3-247ENST00000557311 ATICP31939 592 aa5.13□□□□□ -1.59
ATXN3-247ENST00000557311 EIF2S3P41091 472 aaKnown RBP5.13□□□□□ -1.59
ATXN3-247ENST00000557311 PNPLA4P41247 253 aa5.13□□□□□ -1.59
ATXN3-247ENST00000557311 MAGEA11P43364 429 aa5.13□□□□□ -1.59
ATXN3-247ENST00000557311 HNRNPH2P55795 449 aaKnown RBP5.13□□□□□ -1.59
ATXN3-247ENST00000557311 YBX1P67809 324 aaKnown RBP5.13□□□□□ -1.59
ATXN3-247ENST00000557311 ZXDBP98169 803 aa5.13□□□□□ -1.59
ATXN3-247ENST00000557311 MYL7Q01449 175 aa5.13□□□□□ -1.59
ATXN3-247ENST00000557311 SYCP1Q15431 976 aa5.13□□□□□ -1.59
ATXN3-247ENST00000557311 SF1Q15637 639 aaKnown RBP5.13□□□□□ -1.59
ATXN3-247ENST00000557311 SMAD1Q15797 465 aaKnown RBP5.13□□□□□ -1.59
ATXN3-247ENST00000557311 HLA-BQ31612 363 aa5.13□□□□□ -1.59
ATXN3-247ENST00000557311 CFAP221Q4G0U5 840 aa5.13□□□□□ -1.59
ATXN3-247ENST00000557311 BTBD8Q5XKL5 378 aa5.13□□□□□ -1.59
ATXN3-247ENST00000557311 TTC19Q6DKK2 380 aaPredicted RBP5.13□□□□□ -1.59
ATXN3-247ENST00000557311 LEKR1Q6ZMV7 388 aa5.13□□□□□ -1.59
ATXN3-247ENST00000557311 GPR155Q7Z3F1 870 aa5.13□□□□□ -1.59
ATXN3-247ENST00000557311 TMPRSS12Q86WS5 348 aa5.13□□□□□ -1.59
ATXN3-247ENST00000557311 DDX42Q86XP3 938 aaKnown RBP eCLIP5.13□□□□□ -1.59
ATXN3-247ENST00000557311 MARCH9Q86YJ5 346 aa5.13□□□□□ -1.59
ATXN3-247ENST00000557311 SPATA2LQ8IUW3 424 aaPredicted RBP5.13□□□□□ -1.59
ATXN3-247ENST00000557311 SFTPA1Q8IWL2 248 aa5.13□□□□□ -1.59
ATXN3-247ENST00000557311 SCN4BQ8IWT1 228 aa5.13□□□□□ -1.59
ATXN3-247ENST00000557311 C10orf67Q8IYJ2 551 aa5.13□□□□□ -1.59
ATXN3-247ENST00000557311 C4orf32Q8N8J7 132 aa5.13□□□□□ -1.59
ATXN3-247ENST00000557311 C1orf131Q8NDD1 294 aaKnown RBP5.13□□□□□ -1.59
ATXN3-247ENST00000557311 STKLD1Q8NE28 680 aa5.13□□□□□ -1.59
ATXN3-247ENST00000557311 ENGASEQ8NFI3 743 aa5.13□□□□□ -1.59
ATXN3-247ENST00000557311 CADM4Q8NFZ8 388 aa5.13□□□□□ -1.59
ATXN3-247ENST00000557311 SREK1Q8WXA9 508 aaKnown RBP5.13□□□□□ -1.59
ATXN3-247ENST00000557311 OTUB2Q96DC9 234 aa5.13□□□□□ -1.59
ATXN3-247ENST00000557311 PEX11GQ96HA9 241 aa5.13□□□□□ -1.59
ATXN3-247ENST00000557311 FUBP3Q96I24 572 aaKnown RBP eCLIP5.13□□□□□ -1.59
ATXN3-247ENST00000557311 SPATA17Q96L03 361 aa5.13□□□□□ -1.59
ATXN3-247ENST00000557311 CEP295NLQ96MC4 621 aa5.13□□□□□ -1.59
ATXN3-247ENST00000557311 CCDC140Q96MF4 163 aa5.13□□□□□ -1.59
ATXN3-247ENST00000557311 MSTO1Q9BUK6 570 aa5.13□□□□□ -1.59
ATXN3-247ENST00000557311 RNF38Q9H0F5 515 aa5.13□□□□□ -1.59
ATXN3-247ENST00000557311 EPN3Q9H201 632 aa5.13□□□□□ -1.59
ATXN3-247ENST00000557311 GAREM1Q9H706 876 aa5.13□□□□□ -1.59
ATXN3-247ENST00000557311 ZDHHC4Q9NPG8 344 aa5.13□□□□□ -1.59
ATXN3-247ENST00000557311 TM7SF3Q9NS93 570 aa5.13□□□□□ -1.59
ATXN3-247ENST00000557311 DDX43Q9NXZ2 648 aaKnown RBP5.13□□□□□ -1.59
ATXN3-247ENST00000557311 EHD2Q9NZN4 543 aa5.13□□□□□ -1.59
ATXN3-247ENST00000557311 KCND2Q9NZV8 630 aa5.13□□□□□ -1.59
ATXN3-247ENST00000557311 LARSQ9P2J5 1176 aaKnown RBP5.13□□□□□ -1.59
ATXN3-247ENST00000557311 DEC1Q9P2X7 70 aa5.13□□□□□ -1.59
ATXN3-247ENST00000557311 GTF3C4Q9UKN8 822 aa5.13□□□□□ -1.59
ATXN3-247ENST00000557311 BLOC1S6Q9UL45 172 aa5.13□□□□□ -1.59
ATXN3-247ENST00000557311 ZKSCAN5Q9Y2L8 839 aa5.13□□□□□ -1.59
ATXN3-247ENST00000557311 COA3Q9Y2R0 106 aaPredicted RBP5.13□□□□□ -1.59
ATXN3-247ENST00000557311 ASCC3Q8N3C0 2202 aaKnown RBP5.13□□□□□ -1.59
ATXN3-247ENST00000557311 URB1O60287 2271 aaKnown RBP5.13□□□□□ -1.59
ATXN3-247ENST00000557311 SMG1Q96Q15 3661 aaKnown RBP5.13□□□□□ -1.59
ATXN3-247ENST00000557311 SETXQ7Z333 2677 aaKnown RBP5.12□□□□□ -1.59
ATXN3-247ENST00000557311 E2F8A0AVK6 867 aa5.12□□□□□ -1.59
ATXN3-247ENST00000557311 FAM149AA5PLN7 773 aa5.12□□□□□ -1.59
ATXN3-247ENST00000557311 C22orf46C9J442 243 aa5.12□□□□□ -1.59
ATXN3-247ENST00000557311 MYO1CO00159 1063 aa5.12□□□□□ -1.59
ATXN3-247ENST00000557311 HNRNPDLO14979 420 aaKnown RBP5.12□□□□□ -1.59
ATXN3-247ENST00000557311 BCAT2O15382 392 aaPredicted RBP5.12□□□□□ -1.59
ATXN3-247ENST00000557311 ARHGAP6O43182 974 aa5.12□□□□□ -1.59
ATXN3-247ENST00000557311 BUB1BO60566 1050 aaPredicted RBP5.12□□□□□ -1.59
ATXN3-247ENST00000557311 TULP3O75386 442 aa5.12□□□□□ -1.59
ATXN3-247ENST00000557311 OLFM2O95897 454 aa5.12□□□□□ -1.59
ATXN3-247ENST00000557311 PIGRP01833 764 aa5.12□□□□□ -1.59
ATXN3-247ENST00000557311 FAM163BP0C2L3 166 aa5.12□□□□□ -1.59
ATXN3-247ENST00000557311 MYBL2P10244 700 aa5.12□□□□□ -1.59
ATXN3-247ENST00000557311 CDK4P11802 303 aa5.12□□□□□ -1.59
ATXN3-247ENST00000557311 JUPP14923 745 aa5.12□□□□□ -1.59
ATXN3-247ENST00000557311 PCSK1P29120 753 aa5.12□□□□□ -1.59
ATXN3-247ENST00000557311 OXTRP30559 389 aa5.12□□□□□ -1.59
ATXN3-247ENST00000557311 PRPHP41219 470 aa5.12□□□□□ -1.59
ATXN3-247ENST00000557311 MATKP42679 507 aa5.12□□□□□ -1.59
ATXN3-247ENST00000557311 WASP42768 502 aa5.12□□□□□ -1.59
ATXN3-247ENST00000557311 TRAPPC10P48553 1259 aa5.12□□□□□ -1.59
ATXN3-247ENST00000557311 LHX1P48742 406 aa5.12□□□□□ -1.59
ATXN3-247ENST00000557311 PPP2R2AP63151 447 aa5.12□□□□□ -1.59
ATXN3-247ENST00000557311 KDSRQ06136 332 aa5.12□□□□□ -1.59
ATXN3-247ENST00000557311 SSPNQ14714 243 aa5.12□□□□□ -1.59
ATXN3-247ENST00000557311 ANKRD1Q15327 319 aa5.12□□□□□ -1.59
ATXN3-247ENST00000557311 SKOR2Q2VWA4 1001 aaPredicted RBP5.12□□□□□ -1.59
ATXN3-247ENST00000557311 TTC38Q5R3I4 469 aa5.12□□□□□ -1.59
ATXN3-247ENST00000557311 LY6G5CQ5SRR4 150 aa5.12□□□□□ -1.59
ATXN3-247ENST00000557311 C10orf76Q5T2E6 689 aa5.12□□□□□ -1.59
ATXN3-247ENST00000557311 ACBD5Q5T8D3 534 aaPredicted RBP5.12□□□□□ -1.59
ATXN3-247ENST00000557311 HHATQ5VTY9 493 aa5.12□□□□□ -1.59
ATXN3-247ENST00000557311 SLFN12LQ6IEE8 588 aa5.12□□□□□ -1.59
ATXN3-247ENST00000557311 FAM171BQ6P995 826 aa5.12□□□□□ -1.59
ATXN3-247ENST00000557311 VSTM1Q6UX27 236 aa5.12□□□□□ -1.59
ATXN3-247ENST00000557311 C4orf50Q6ZRC1 276 aa5.12□□□□□ -1.59
ATXN3-247ENST00000557311 ZNF662Q6ZS27 426 aa5.12□□□□□ -1.59
ATXN3-247ENST00000557311 DENND5BQ6ZUT9 1274 aa5.12□□□□□ -1.59
ATXN3-247ENST00000557311 USP53Q70EK8 1073 aa5.12□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms