RNA–Protein interactions for RNA: ENST00000557293.5

PSEN1-221, Transcript of presenilin 1, humanhuman

TSL 2

Gene PSEN1, Length 576 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-221ENST00000557293 FOXD4L4Q8WXT5 416 aaPredicted RBP12.85□□□□□ -0.35
PSEN1-221ENST00000557293 LIN37Q96GY3 246 aaPredicted RBP12.85□□□□□ -0.35
PSEN1-221ENST00000557293 HDAC8Q9BY41 377 aa12.85□□□□□ -0.35
PSEN1-221ENST00000557293 SLTMQ9NWH9 1034 aaKnown RBP eCLIP12.85□□□□□ -0.35
PSEN1-221ENST00000557293 SLC25A13Q9UJS0 675 aa12.85□□□□□ -0.35
PSEN1-221ENST00000557293 HPSEQ9Y251 543 aa12.85□□□□□ -0.35
PSEN1-221ENST00000557293 HS3ST2Q9Y278 367 aa12.85□□□□□ -0.35
PSEN1-221ENST00000557293 A0A1B0GVL5 298 aa12.84□□□□□ -0.35
PSEN1-221ENST00000557293 RIOK3O14730 519 aaKnown RBP12.84□□□□□ -0.35
PSEN1-221ENST00000557293 PLD2O14939 933 aa12.84□□□□□ -0.35
PSEN1-221ENST00000557293 STX10O60499 249 aa12.84□□□□□ -0.35
PSEN1-221ENST00000557293 SNAP91O60641 907 aa12.84□□□□□ -0.35
PSEN1-221ENST00000557293 ZNF821O75541 412 aaPredicted RBP12.84□□□□□ -0.35
PSEN1-221ENST00000557293 APOEP02649 317 aa12.84□□□□□ -0.35
PSEN1-221ENST00000557293 MYL1P05976 194 aa12.84□□□□□ -0.35
PSEN1-221ENST00000557293 GP1BBP13224 206 aa12.84□□□□□ -0.35
PSEN1-221ENST00000557293 JUNDP17535 347 aa12.84□□□□□ -0.35
PSEN1-221ENST00000557293 OXCT1P55809 520 aa12.84□□□□□ -0.35
PSEN1-221ENST00000557293 YWHAEP62258 255 aaKnown RBP12.84□□□□□ -0.35
PSEN1-221ENST00000557293 NUCB2P80303 420 aa12.84□□□□□ -0.35
PSEN1-221ENST00000557293 TLE1Q04724 770 aa12.84□□□□□ -0.35
PSEN1-221ENST00000557293 TAF5Q15542 800 aa12.84□□□□□ -0.35
PSEN1-221ENST00000557293 C5orf22Q49AR2 442 aa12.84□□□□□ -0.35
PSEN1-221ENST00000557293 ARSIQ5FYB1 569 aa12.84□□□□□ -0.35
PSEN1-221ENST00000557293 C14orf80Q86SX3 495 aa12.84□□□□□ -0.35
PSEN1-221ENST00000557293 PARGQ86W56 976 aa12.84□□□□□ -0.35
PSEN1-221ENST00000557293 RBFAQ8N0V3 343 aa12.84□□□□□ -0.35
PSEN1-221ENST00000557293 ATP6V0D2Q8N8Y2 350 aa12.84□□□□□ -0.35
PSEN1-221ENST00000557293 HTR3CQ8WXA8 447 aa12.84□□□□□ -0.35
PSEN1-221ENST00000557293 FAM149B1Q96BN6 582 aa12.84□□□□□ -0.35
PSEN1-221ENST00000557293 CCDC3Q9BQI4 270 aa12.84□□□□□ -0.35
PSEN1-221ENST00000557293 C1QTNF2Q9BXJ5 285 aa12.84□□□□□ -0.35
PSEN1-221ENST00000557293 SLC4A5Q9BY07 1137 aa12.84□□□□□ -0.35
PSEN1-221ENST00000557293 CLPBQ9H078 707 aa12.84□□□□□ -0.35
PSEN1-221ENST00000557293 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.84□□□□□ -0.35
PSEN1-221ENST00000557293 NCKIPSDQ9NZQ3 722 aa12.84□□□□□ -0.35
PSEN1-221ENST00000557293 RABGEF1Q9UJ41 708 aa12.84□□□□□ -0.35
PSEN1-221ENST00000557293 TBC1D30Q9Y2I9 924 aa12.84□□□□□ -0.35
PSEN1-221ENST00000557293 TEX15Q9BXT5 2789 aa12.83□□□□□ -0.36
PSEN1-221ENST00000557293 PFKFB1P16118 471 aa12.83□□□□□ -0.36
PSEN1-221ENST00000557293 PFN3P60673 137 aa12.83□□□□□ -0.36
PSEN1-221ENST00000557293 C1orf61Q13536 156 aa12.83□□□□□ -0.36
PSEN1-221ENST00000557293 AUHQ13825 339 aaKnown RBP12.83□□□□□ -0.36
PSEN1-221ENST00000557293 CLCA4Q14CN2 919 aa12.83□□□□□ -0.36
PSEN1-221ENST00000557293 ARTNQ5T4W7 220 aa12.83□□□□□ -0.36
PSEN1-221ENST00000557293 TTC39BQ5VTQ0 682 aaPredicted RBP12.83□□□□□ -0.36
PSEN1-221ENST00000557293 FBXO39Q8N4B4 442 aa12.83□□□□□ -0.36
PSEN1-221ENST00000557293 LMO3Q8TAP4 145 aa12.83□□□□□ -0.36
PSEN1-221ENST00000557293 VOPP1Q96AW1 172 aa12.83□□□□□ -0.36
PSEN1-221ENST00000557293 LENG8Q96PV6 779 aaPredicted RBP12.83□□□□□ -0.36
PSEN1-221ENST00000557293 USP25Q9UHP3 1055 aa12.83□□□□□ -0.36
PSEN1-221ENST00000557293 VPS28Q9UK41 221 aa12.83□□□□□ -0.36
PSEN1-221ENST00000557293 PADI4Q9UM07 663 aa12.83□□□□□ -0.36
PSEN1-221ENST00000557293 PCDHB4Q9Y5E5 795 aa12.83□□□□□ -0.36
PSEN1-221ENST00000557293 FADS3Q9Y5Q0 445 aa12.83□□□□□ -0.36
PSEN1-221ENST00000557293 WASF2Q9Y6W5 498 aa12.83□□□□□ -0.36
PSEN1-221ENST00000557293 A0A1W2PQM1 296 aa12.82□□□□□ -0.36
PSEN1-221ENST00000557293 CETN3O15182 167 aa12.82□□□□□ -0.36
PSEN1-221ENST00000557293 YY2O15391 372 aa12.82□□□□□ -0.36
PSEN1-221ENST00000557293 CNTN5O94779 1100 aa12.82□□□□□ -0.36
PSEN1-221ENST00000557293 HGFP14210 728 aa12.82□□□□□ -0.36
PSEN1-221ENST00000557293 CR2P20023 1033 aa12.82□□□□□ -0.36
PSEN1-221ENST00000557293 RRM1P23921 792 aa12.82□□□□□ -0.36
PSEN1-221ENST00000557293 CMA1P23946 247 aa12.82□□□□□ -0.36
PSEN1-221ENST00000557293 TBXAS1P24557 533 aaPredicted RBP12.82□□□□□ -0.36
PSEN1-221ENST00000557293 RABIFP47224 123 aa12.82□□□□□ -0.36
PSEN1-221ENST00000557293 ADKP55263 362 aaKnown RBP12.82□□□□□ -0.36
PSEN1-221ENST00000557293 YWHAZP63104 245 aaKnown RBP12.82□□□□□ -0.36
PSEN1-221ENST00000557293 CYP4F2P78329 520 aa12.82□□□□□ -0.36
PSEN1-221ENST00000557293 MAPK8IP2Q13387 824 aaPredicted RBP12.82□□□□□ -0.36
PSEN1-221ENST00000557293 PDE1CQ14123 709 aaPredicted RBP12.82□□□□□ -0.36
PSEN1-221ENST00000557293 STILQ15468 1287 aa12.82□□□□□ -0.36
PSEN1-221ENST00000557293 DENND1BQ6P3S1 775 aa12.82□□□□□ -0.36
PSEN1-221ENST00000557293 DPY19L3Q6ZPD9 716 aa12.82□□□□□ -0.36
PSEN1-221ENST00000557293 RAB11FIP2Q7L804 512 aa12.82□□□□□ -0.36
PSEN1-221ENST00000557293 TMEM110Q86TL2 294 aa12.82□□□□□ -0.36
PSEN1-221ENST00000557293 WDR48Q8TAF3 677 aa12.82□□□□□ -0.36
PSEN1-221ENST00000557293 SLC35C1Q96A29 364 aa12.82□□□□□ -0.36
PSEN1-221ENST00000557293 FEM1CQ96JP0 617 aa12.82□□□□□ -0.36
PSEN1-221ENST00000557293 PPP1R9BQ96SB3 815 aa12.82□□□□□ -0.36
PSEN1-221ENST00000557293 IL12RB2Q99665 862 aa12.82□□□□□ -0.36
PSEN1-221ENST00000557293 ARHGAP9Q9BRR9 750 aa12.82□□□□□ -0.36
PSEN1-221ENST00000557293 FUCA2Q9BTY2 467 aa12.82□□□□□ -0.36
PSEN1-221ENST00000557293 GEMIN8Q9NWZ8 242 aaKnown RBP12.82□□□□□ -0.36
PSEN1-221ENST00000557293 VPS51Q9UID3 782 aa12.82□□□□□ -0.36
PSEN1-221ENST00000557293 SCN8AQ9UQD0 1980 aa12.81□□□□□ -0.36
PSEN1-221ENST00000557293 LMO7DNF2Z398 122 aa12.81□□□□□ -0.36
PSEN1-221ENST00000557293 H3BM21 787 aa12.81□□□□□ -0.36
PSEN1-221ENST00000557293 NVLO15381 856 aaKnown RBP12.81□□□□□ -0.36
PSEN1-221ENST00000557293 SART1O43290 800 aaKnown RBP12.81□□□□□ -0.36
PSEN1-221ENST00000557293 LEFTY1O75610 366 aa12.81□□□□□ -0.36
PSEN1-221ENST00000557293 PRNPP04156 253 aa12.81□□□□□ -0.36
PSEN1-221ENST00000557293 EPB41P11171 864 aaKnown RBP12.81□□□□□ -0.36
PSEN1-221ENST00000557293 SFTPCP11686 197 aa12.81□□□□□ -0.36
PSEN1-221ENST00000557293 GGCXP38435 758 aa12.81□□□□□ -0.36
PSEN1-221ENST00000557293 INHBCP55103 352 aa12.81□□□□□ -0.36
PSEN1-221ENST00000557293 RPS21P63220 83 aaKnown RBP12.81□□□□□ -0.36
PSEN1-221ENST00000557293 CCL7P80098 99 aa12.81□□□□□ -0.36
PSEN1-221ENST00000557293 CCDC15Q0P6D6 951 aa12.81□□□□□ -0.36
PSEN1-221ENST00000557293 SPIDRQ14159 915 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms