RNA–Protein interactions for RNA: ENST00000557159.5

APEX1-216, Transcript of apurinic/apyrimidinic endodeoxyribonuclease 1, humanhuman

TSL 2

Gene APEX1, Length 1,803 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APEX1-216ENST00000557159 PTPN11Q06124 597 aaPredicted RBP12.76□□□□□ -0.37
APEX1-216ENST00000557159 FAM102AQ5T9C2 384 aaPredicted RBP12.76□□□□□ -0.37
APEX1-216ENST00000557159 INTS11Q5TA45 600 aaKnown RBP12.76□□□□□ -0.37
APEX1-216ENST00000557159 NAPRTQ6XQN6 538 aa12.76□□□□□ -0.37
APEX1-216ENST00000557159 RXFP2Q8WXD0 754 aa12.76□□□□□ -0.37
APEX1-216ENST00000557159 ABHD8Q96I13 439 aa12.76□□□□□ -0.37
APEX1-216ENST00000557159 MAELQ96JY0 434 aaKnown RBP12.76□□□□□ -0.37
APEX1-216ENST00000557159 RBBP8Q99708 897 aa12.76□□□□□ -0.37
APEX1-216ENST00000557159 TUBA1CQ9BQE3 449 aa12.76□□□□□ -0.37
APEX1-216ENST00000557159 YTHDF1Q9BYJ9 559 aaKnown RBP12.76□□□□□ -0.37
APEX1-216ENST00000557159 DNAI2Q9GZS0 605 aa12.76□□□□□ -0.37
APEX1-216ENST00000557159 CAAP1Q9H8G2 361 aa12.76□□□□□ -0.37
APEX1-216ENST00000557159 VRTNQ9H8Y1 702 aa12.76□□□□□ -0.37
APEX1-216ENST00000557159 MAN1C1Q9NR34 630 aa12.76□□□□□ -0.37
APEX1-216ENST00000557159 ARMC1Q9NVT9 282 aa12.76□□□□□ -0.37
APEX1-216ENST00000557159 GIN1Q9NXP7 522 aa12.76□□□□□ -0.37
APEX1-216ENST00000557159 TXNDC16Q9P2K2 825 aa12.76□□□□□ -0.37
APEX1-216ENST00000557159 CPSF3Q9UKF6 684 aaKnown RBP12.76□□□□□ -0.37
APEX1-216ENST00000557159 A0A0A0MRY4 1105 aa12.75□□□□□ -0.37
APEX1-216ENST00000557159 TMEM247A6NEH6 219 aa12.75□□□□□ -0.37
APEX1-216ENST00000557159 NOP56O00567 594 aaKnown RBP12.75□□□□□ -0.37
APEX1-216ENST00000557159 FBP2O00757 339 aa12.75□□□□□ -0.37
APEX1-216ENST00000557159 TRIM24O15164 1050 aa12.75□□□□□ -0.37
APEX1-216ENST00000557159 CABYRO75952 493 aa12.75□□□□□ -0.37
APEX1-216ENST00000557159 MICAL2O94851 1124 aa12.75□□□□□ -0.37
APEX1-216ENST00000557159 HOXC6P09630 235 aa12.75□□□□□ -0.37
APEX1-216ENST00000557159 PDGFRAP16234 1089 aa12.75□□□□□ -0.37
APEX1-216ENST00000557159 PTPN1P18031 435 aaKnown RBP12.75□□□□□ -0.37
APEX1-216ENST00000557159 PTK2BQ14289 1009 aa12.75□□□□□ -0.37
APEX1-216ENST00000557159 KCTD2Q14681 263 aa12.75□□□□□ -0.37
APEX1-216ENST00000557159 MAPRE2Q15555 327 aa12.75□□□□□ -0.37
APEX1-216ENST00000557159 DPYSL2Q16555 572 aa12.75□□□□□ -0.37
APEX1-216ENST00000557159 PPM1LQ5SGD2 360 aa12.75□□□□□ -0.37
APEX1-216ENST00000557159 HACD2Q6Y1H2 254 aa12.75□□□□□ -0.37
APEX1-216ENST00000557159 PDPRQ8NCN5 879 aa12.75□□□□□ -0.37
APEX1-216ENST00000557159 TMEM143Q96AN5 459 aa12.75□□□□□ -0.37
APEX1-216ENST00000557159 PLEKHA8Q96JA3 519 aa12.75□□□□□ -0.37
APEX1-216ENST00000557159 ZNF512Q96ME7 567 aaPredicted RBP12.75□□□□□ -0.37
APEX1-216ENST00000557159 SPATA13Q96N96 652 aa12.75□□□□□ -0.37
APEX1-216ENST00000557159 GATA5Q9BWX5 397 aaPredicted RBP12.75□□□□□ -0.37
APEX1-216ENST00000557159 C2orf40Q9H1Z8 148 aa12.75□□□□□ -0.37
APEX1-216ENST00000557159 CYP3A43Q9HB55 503 aa12.75□□□□□ -0.37
APEX1-216ENST00000557159 CD320Q9NPF0 282 aa12.75□□□□□ -0.37
APEX1-216ENST00000557159 DUS2Q9NX74 493 aaKnown RBP12.75□□□□□ -0.37
APEX1-216ENST00000557159 CDYLQ9Y232 598 aa12.75□□□□□ -0.37
APEX1-216ENST00000557159 ANKRD6Q9Y2G4 727 aa12.75□□□□□ -0.37
APEX1-216ENST00000557159 TDRKHQ9Y2W6 561 aaKnown RBP12.75□□□□□ -0.37
APEX1-216ENST00000557159 HEY1Q9Y5J3 304 aa12.75□□□□□ -0.37
APEX1-216ENST00000557159 A0A1B0GTW7 788 aa12.74□□□□□ -0.37
APEX1-216ENST00000557159 HTR3EA5X5Y0 456 aa12.74□□□□□ -0.37
APEX1-216ENST00000557159 PSMD12O00232 456 aaPredicted RBP12.74□□□□□ -0.37
APEX1-216ENST00000557159 GRID2O43424 1007 aa12.74□□□□□ -0.37
APEX1-216ENST00000557159 POLBP06746 335 aa12.74□□□□□ -0.37
APEX1-216ENST00000557159 VDRP11473 427 aa12.74□□□□□ -0.37
APEX1-216ENST00000557159 ENO3P13929 434 aaPredicted RBP12.74□□□□□ -0.37
APEX1-216ENST00000557159 TFEBP19484 476 aa12.74□□□□□ -0.37
APEX1-216ENST00000557159 CTGFP29279 349 aa12.74□□□□□ -0.37
APEX1-216ENST00000557159 HOXD12P35452 270 aa12.74□□□□□ -0.37
APEX1-216ENST00000557159 TCF7P36402 384 aaPredicted RBP12.74□□□□□ -0.37
APEX1-216ENST00000557159 HALP42357 657 aa12.74□□□□□ -0.37
APEX1-216ENST00000557159 RGS19P49795 217 aa12.74□□□□□ -0.37
APEX1-216ENST00000557159 CSE1LP55060 971 aaKnown RBP12.74□□□□□ -0.37
APEX1-216ENST00000557159 PKNOX1P55347 436 aa12.74□□□□□ -0.37
APEX1-216ENST00000557159 C21orf59P57076 290 aa12.74□□□□□ -0.37
APEX1-216ENST00000557159 LIPMQ5VYY2 423 aa12.74□□□□□ -0.37
APEX1-216ENST00000557159 SCARA3Q6AZY7 606 aa12.74□□□□□ -0.37
APEX1-216ENST00000557159 TRNP1Q6NT89 227 aa12.74□□□□□ -0.37
APEX1-216ENST00000557159 ZYG11AQ6WRX3 759 aa12.74□□□□□ -0.37
APEX1-216ENST00000557159 LYSMD3Q7Z3D4 306 aa12.74□□□□□ -0.37
APEX1-216ENST00000557159 GPR142Q7Z601 462 aa12.74□□□□□ -0.37
APEX1-216ENST00000557159 CLVS1Q8IUQ0 354 aaPredicted RBP12.74□□□□□ -0.37
APEX1-216ENST00000557159 TTC39CQ8N584 583 aa12.74□□□□□ -0.37
APEX1-216ENST00000557159 TBC1D15Q8TC07 691 aa12.74□□□□□ -0.37
APEX1-216ENST00000557159 PNPT1Q8TCS8 783 aaKnown RBP12.74□□□□□ -0.37
APEX1-216ENST00000557159 TRUB1Q8WWH5 349 aaKnown RBP12.74□□□□□ -0.37
APEX1-216ENST00000557159 PBXIP1Q96AQ6 731 aa12.74□□□□□ -0.37
APEX1-216ENST00000557159 CERS2Q96G23 380 aa12.74□□□□□ -0.37
APEX1-216ENST00000557159 CORO1BQ9BR76 489 aa12.74□□□□□ -0.37
APEX1-216ENST00000557159 RPF2Q9H7B2 306 aaKnown RBP12.74□□□□□ -0.37
APEX1-216ENST00000557159 LIN28AQ9H9Z2 209 aaKnown RBP12.74□□□□□ -0.37
APEX1-216ENST00000557159 KIAA1257Q9ULG3 409 aa12.74□□□□□ -0.37
APEX1-216ENST00000557159 PSAT1Q9Y617 370 aa12.74□□□□□ -0.37
APEX1-216ENST00000557159 DOCK3Q8IZD9 2030 aa12.74□□□□□ -0.37
APEX1-216ENST00000557159 TRIM43BA6NCK2 446 aa12.74□□□□□ -0.37
APEX1-216ENST00000557159 XPO1O14980 1071 aaKnown RBP12.74□□□□□ -0.37
APEX1-216ENST00000557159 AKAP10O43572 662 aa12.74□□□□□ -0.37
APEX1-216ENST00000557159 SNAP91O60641 907 aa12.74□□□□□ -0.37
APEX1-216ENST00000557159 CILPO75339 1184 aa12.74□□□□□ -0.37
APEX1-216ENST00000557159 TNNC2P02585 160 aa12.74□□□□□ -0.37
APEX1-216ENST00000557159 EDN1P05305 212 aa12.74□□□□□ -0.37
APEX1-216ENST00000557159 OCM2P0CE71 109 aa12.74□□□□□ -0.37
APEX1-216ENST00000557159 OCMP0CE72 109 aaPredicted RBP12.74□□□□□ -0.37
APEX1-216ENST00000557159 CAP1Q01518 475 aa12.74□□□□□ -0.37
APEX1-216ENST00000557159 ZBTB17Q13105 803 aa12.74□□□□□ -0.37
APEX1-216ENST00000557159 STX5Q13190 355 aa12.74□□□□□ -0.37
APEX1-216ENST00000557159 PPM1JQ5JR12 505 aa12.74□□□□□ -0.37
APEX1-216ENST00000557159 CELF3Q5SZQ8 465 aaKnown RBP12.74□□□□□ -0.37
APEX1-216ENST00000557159 HEATR6Q6AI08 1181 aaKnown RBP12.74□□□□□ -0.37
APEX1-216ENST00000557159 TMEM110Q86TL2 294 aa12.74□□□□□ -0.37
APEX1-216ENST00000557159 ZBTB8OSQ8IWT0 167 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms