RNA–Protein interactions for RNA: ENST00000556648.1

TMEM260-211, Transcript of transmembrane protein 260, humanhuman

TSL 2

Gene TMEM260, Length 2,013 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-211ENST00000556648 C10orf120Q5SQS8 335 aa10.29□□□□□ -0.76
TMEM260-211ENST00000556648 ESRP1Q6NXG1 681 aaKnown RBP10.29□□□□□ -0.76
TMEM260-211ENST00000556648 FBXL22Q6P050 247 aa10.29□□□□□ -0.76
TMEM260-211ENST00000556648 MAVSQ7Z434 540 aa10.29□□□□□ -0.76
TMEM260-211ENST00000556648 LONP2Q86WA8 852 aa10.29□□□□□ -0.76
TMEM260-211ENST00000556648 MFSD6LQ8IWD5 586 aa10.29□□□□□ -0.76
TMEM260-211ENST00000556648 PPP1R14CQ8TAE6 165 aa10.29□□□□□ -0.76
TMEM260-211ENST00000556648 VPS39Q96JC1 886 aa10.29□□□□□ -0.76
TMEM260-211ENST00000556648 SORT1Q99523 831 aa10.29□□□□□ -0.76
TMEM260-211ENST00000556648 EBF4Q9BQW3 602 aa10.29□□□□□ -0.76
TMEM260-211ENST00000556648 UNC93B1Q9H1C4 597 aa10.29□□□□□ -0.76
TMEM260-211ENST00000556648 CCSER2Q9H7U1 834 aa10.29□□□□□ -0.76
TMEM260-211ENST00000556648 NT5MQ9NPB1 228 aa10.29□□□□□ -0.76
TMEM260-211ENST00000556648 ACSS2Q9NR19 701 aa10.29□□□□□ -0.76
TMEM260-211ENST00000556648 MTPAPQ9NVV4 582 aaKnown RBP eCLIP10.29□□□□□ -0.76
TMEM260-211ENST00000556648 A0A096LPK6 155 aa10.28□□□□□ -0.76
TMEM260-211ENST00000556648 OR6C75A6NL08 312 aa10.28□□□□□ -0.76
TMEM260-211ENST00000556648 TBC1D4O60343 1298 aa10.28□□□□□ -0.76
TMEM260-211ENST00000556648 RPL17P18621 184 aaKnown RBP10.28□□□□□ -0.76
TMEM260-211ENST00000556648 SAT1P21673 171 aa10.28□□□□□ -0.76
TMEM260-211ENST00000556648 DSC2Q02487 901 aa10.28□□□□□ -0.76
TMEM260-211ENST00000556648 DUSP4Q13115 394 aa10.28□□□□□ -0.76
TMEM260-211ENST00000556648 SEPT6Q14141 434 aa10.28□□□□□ -0.76
TMEM260-211ENST00000556648 TRIP4Q15650 581 aaPredicted RBP10.28□□□□□ -0.76
TMEM260-211ENST00000556648 STXBP5Q5T5C0 1151 aa10.28□□□□□ -0.76
TMEM260-211ENST00000556648 NADSYN1Q6IA69 706 aa10.28□□□□□ -0.76
TMEM260-211ENST00000556648 PKN3Q6P5Z2 889 aa10.28□□□□□ -0.76
TMEM260-211ENST00000556648 KDELC1Q6UW63 502 aa10.28□□□□□ -0.76
TMEM260-211ENST00000556648 TREML1Q86YW5 311 aa10.28□□□□□ -0.76
TMEM260-211ENST00000556648 CRLF3Q8IUI8 442 aa10.28□□□□□ -0.76
TMEM260-211ENST00000556648 SLC41A1Q8IVJ1 513 aa10.28□□□□□ -0.76
TMEM260-211ENST00000556648 DENND6AQ8IWF6 608 aa10.28□□□□□ -0.76
TMEM260-211ENST00000556648 SLC25A41Q8N5S1 370 aa10.28□□□□□ -0.76
TMEM260-211ENST00000556648 LZTR1Q8N653 840 aa10.28□□□□□ -0.76
TMEM260-211ENST00000556648 PNPLA1Q8N8W4 532 aa10.28□□□□□ -0.76
TMEM260-211ENST00000556648 RAB3IL1Q8TBN0 382 aa10.28□□□□□ -0.76
TMEM260-211ENST00000556648 AGAP11Q8TF27 550 aa10.28□□□□□ -0.76
TMEM260-211ENST00000556648 MOCOSQ96EN8 888 aa10.28□□□□□ -0.76
TMEM260-211ENST00000556648 C1orf74Q96LT6 269 aa10.28□□□□□ -0.76
TMEM260-211ENST00000556648 TBC1D10AQ9BXI6 508 aa10.28□□□□□ -0.76
TMEM260-211ENST00000556648 CFHR5Q9BXR6 569 aa10.28□□□□□ -0.76
TMEM260-211ENST00000556648 XRN2Q9H0D6 950 aaKnown RBP eCLIP10.28□□□□□ -0.76
TMEM260-211ENST00000556648 ELAC1Q9H777 363 aaKnown RBP10.28□□□□□ -0.76
TMEM260-211ENST00000556648 MARCH2Q9P0N8 246 aa10.28□□□□□ -0.76
TMEM260-211ENST00000556648 PCDH10Q9P2E7 1040 aa10.28□□□□□ -0.76
TMEM260-211ENST00000556648 ZNF212Q9UDV6 495 aa10.28□□□□□ -0.76
TMEM260-211ENST00000556648 DCDC2Q9UHG0 476 aa10.28□□□□□ -0.76
TMEM260-211ENST00000556648 SLC39A10Q9ULF5 831 aa10.28□□□□□ -0.76
TMEM260-211ENST00000556648 LRFN2Q9ULH4 789 aa10.28□□□□□ -0.76
TMEM260-211ENST00000556648 DNAJC16Q9Y2G8 782 aa10.28□□□□□ -0.76
TMEM260-211ENST00000556648 AAR2Q9Y312 384 aaKnown RBP10.28□□□□□ -0.76
TMEM260-211ENST00000556648 FAM92AA1XBS5 289 aa10.28□□□□□ -0.76
TMEM260-211ENST00000556648 PHGDHO43175 533 aaKnown RBP10.28□□□□□ -0.76
TMEM260-211ENST00000556648 PSMD3O43242 534 aa10.28□□□□□ -0.76
TMEM260-211ENST00000556648 PQBP1O60828 265 aaKnown RBP10.28□□□□□ -0.76
TMEM260-211ENST00000556648 ANXA9O76027 345 aa10.28□□□□□ -0.76
TMEM260-211ENST00000556648 C2P06681 752 aa10.28□□□□□ -0.76
TMEM260-211ENST00000556648 RHOQP17081 205 aa10.28□□□□□ -0.76
TMEM260-211ENST00000556648 ATF6P18850 670 aa10.28□□□□□ -0.76
TMEM260-211ENST00000556648 CPA2P48052 419 aa10.28□□□□□ -0.76
TMEM260-211ENST00000556648 SLC1A6P48664 564 aa10.28□□□□□ -0.76
TMEM260-211ENST00000556648 GEMP55040 296 aa10.28□□□□□ -0.76
TMEM260-211ENST00000556648 WNT3AP56704 352 aa10.28□□□□□ -0.76
TMEM260-211ENST00000556648 SLC10A7Q0GE19 358 aa10.28□□□□□ -0.76
TMEM260-211ENST00000556648 CTBP1Q13363 440 aa10.28□□□□□ -0.76
TMEM260-211ENST00000556648 ZNF460Q14592 562 aa10.28□□□□□ -0.76
TMEM260-211ENST00000556648 E2F5Q15329 346 aa10.28□□□□□ -0.76
TMEM260-211ENST00000556648 PCID2Q5JVF3 399 aa10.28□□□□□ -0.76
TMEM260-211ENST00000556648 TIGD7Q6NT04 549 aaPredicted RBP10.28□□□□□ -0.76
TMEM260-211ENST00000556648 RINLQ6ZS11 566 aa10.28□□□□□ -0.76
TMEM260-211ENST00000556648 CLEC14AQ86T13 490 aa10.28□□□□□ -0.76
TMEM260-211ENST00000556648 LINC00523Q86TU6 105 aa10.28□□□□□ -0.76
TMEM260-211ENST00000556648 ZC3HC1Q86WB0 502 aaKnown RBP10.28□□□□□ -0.76
TMEM260-211ENST00000556648 ARHGAP18Q8N392 663 aa10.28□□□□□ -0.76
TMEM260-211ENST00000556648 SLAIN1Q8ND83 568 aa10.28□□□□□ -0.76
TMEM260-211ENST00000556648 INPP5DQ92835 1189 aa10.28□□□□□ -0.76
TMEM260-211ENST00000556648 PSMG2Q969U7 264 aa10.28□□□□□ -0.76
TMEM260-211ENST00000556648 ZYG11BQ9C0D3 744 aa10.28□□□□□ -0.76
TMEM260-211ENST00000556648 PNPOQ9NVS9 261 aa10.28□□□□□ -0.76
TMEM260-211ENST00000556648 KCNK4Q9NYG8 393 aa10.28□□□□□ -0.76
TMEM260-211ENST00000556648 COPG2Q9UBF2 871 aa10.28□□□□□ -0.76
TMEM260-211ENST00000556648 TCAF1Q9Y4C2 921 aa10.28□□□□□ -0.76
TMEM260-211ENST00000556648 MIA3Q5JRA6 1907 aa10.27□□□□□ -0.77
TMEM260-211ENST00000556648 TANC1Q9C0D5 1861 aa10.27□□□□□ -0.77
TMEM260-211ENST00000556648 MAGEB16A2A368 324 aa10.27□□□□□ -0.77
TMEM260-211ENST00000556648 G3V2L1 256 aa10.27□□□□□ -0.77
TMEM260-211ENST00000556648 AURKAO14965 403 aa10.27□□□□□ -0.77
TMEM260-211ENST00000556648 ATP5HO75947 161 aa10.27□□□□□ -0.77
TMEM260-211ENST00000556648 VAPBO95292 243 aa10.27□□□□□ -0.77
TMEM260-211ENST00000556648 IGLV3-27P01718 113 aa10.27□□□□□ -0.77
TMEM260-211ENST00000556648 SERPINE1P05121 402 aa10.27□□□□□ -0.77
TMEM260-211ENST00000556648 GALTP07902 379 aa10.27□□□□□ -0.77
TMEM260-211ENST00000556648 MMP2P08253 660 aa10.27□□□□□ -0.77
TMEM260-211ENST00000556648 ACVRL1P37023 503 aa10.27□□□□□ -0.77
TMEM260-211ENST00000556648 ETFBP38117 255 aa10.27□□□□□ -0.77
TMEM260-211ENST00000556648 CD86P42081 329 aa10.27□□□□□ -0.77
TMEM260-211ENST00000556648 ARCN1P48444 511 aaKnown RBP10.27□□□□□ -0.77
TMEM260-211ENST00000556648 KCNQ1P51787 676 aa10.27□□□□□ -0.77
TMEM260-211ENST00000556648 CSE1LP55060 971 aaKnown RBP10.27□□□□□ -0.77
TMEM260-211ENST00000556648 CCL23P55773 120 aa10.27□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms