RNA–Protein interactions for RNA: ENST00000556445.1

SRP54-211, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 530 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-211ENST00000556445 MUL1Q969V5 352 aa5.42□□□□□ -1.54
SRP54-211ENST00000556445 JAKMIP2Q96AA8 810 aa5.42□□□□□ -1.54
SRP54-211ENST00000556445 ZUFSPQ96AP4 578 aa5.42□□□□□ -1.54
SRP54-211ENST00000556445 NEU1Q99519 415 aa5.42□□□□□ -1.54
SRP54-211ENST00000556445 PRRX2Q99811 253 aa5.42□□□□□ -1.54
SRP54-211ENST00000556445 ADI1Q9BV57 179 aa5.42□□□□□ -1.54
SRP54-211ENST00000556445 TRIM9Q9C026 710 aa5.42□□□□□ -1.54
SRP54-211ENST00000556445 TMEM39BQ9GZU3 492 aa5.42□□□□□ -1.54
SRP54-211ENST00000556445 DEFB129Q9H1M3 183 aa5.42□□□□□ -1.54
SRP54-211ENST00000556445 RANBP17Q9H2T7 1088 aaKnown RBP5.42□□□□□ -1.54
SRP54-211ENST00000556445 SLITRK6Q9H5Y7 841 aa5.42□□□□□ -1.54
SRP54-211ENST00000556445 TTC12Q9H892 705 aaPredicted RBP5.42□□□□□ -1.54
SRP54-211ENST00000556445 KCNMB3Q9NPA1 279 aa5.42□□□□□ -1.54
SRP54-211ENST00000556445 TMEM160Q9NX00 188 aa5.42□□□□□ -1.54
SRP54-211ENST00000556445 CNOT7Q9UIV1 285 aaKnown RBP5.42□□□□□ -1.54
SRP54-211ENST00000556445 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP5.42□□□□□ -1.545e-12■□□□□ 8.4
SRP54-211ENST00000556445 DICER1Q9UPY3 1922 aaKnown RBP5.42□□□□□ -1.54
SRP54-211ENST00000556445 COL4A5P29400 1685 aa5.41□□□□□ -1.54
SRP54-211ENST00000556445 A0A0B4J269 797 aa5.41□□□□□ -1.54
SRP54-211ENST00000556445 A0A1W2PRG0 241 aa5.41□□□□□ -1.54
SRP54-211ENST00000556445 CCDC154A6NI56 674 aa5.41□□□□□ -1.54
SRP54-211ENST00000556445 H0Y3Z8 333 aa5.41□□□□□ -1.54
SRP54-211ENST00000556445 ZNF185O15231 689 aa5.41□□□□□ -1.54
SRP54-211ENST00000556445 PHGDHO43175 533 aaKnown RBP5.41□□□□□ -1.54
SRP54-211ENST00000556445 SUV39H1O43463 412 aa5.41□□□□□ -1.54
SRP54-211ENST00000556445 HTRA2O43464 458 aaPredicted RBP5.41□□□□□ -1.54
SRP54-211ENST00000556445 PTP4A3O75365 173 aa5.41□□□□□ -1.54
SRP54-211ENST00000556445 NCR1O76036 304 aa5.41□□□□□ -1.54
SRP54-211ENST00000556445 TGDSO95455 350 aa5.41□□□□□ -1.54
SRP54-211ENST00000556445 TDP2O95551 362 aa5.41□□□□□ -1.54
SRP54-211ENST00000556445 MT-ND3P03897 115 aa5.41□□□□□ -1.54
SRP54-211ENST00000556445 ICAM1P05362 532 aa5.41□□□□□ -1.54
SRP54-211ENST00000556445 SKILP12757 684 aa5.41□□□□□ -1.54
SRP54-211ENST00000556445 PORP16435 677 aaPredicted RBP5.41□□□□□ -1.54
SRP54-211ENST00000556445 CCNE1P24864 410 aa5.41□□□□□ -1.54
SRP54-211ENST00000556445 MGAT1P26572 445 aa5.41□□□□□ -1.54
SRP54-211ENST00000556445 CCT6AP40227 531 aaKnown RBP5.41□□□□□ -1.54
SRP54-211ENST00000556445 CD86P42081 329 aa5.41□□□□□ -1.54
SRP54-211ENST00000556445 MAP2K6P52564 334 aa5.41□□□□□ -1.54
SRP54-211ENST00000556445 IFI35P80217 286 aaPredicted RBP5.41□□□□□ -1.54
SRP54-211ENST00000556445 FMO1Q01740 532 aa5.41□□□□□ -1.54
SRP54-211ENST00000556445 NOMO1Q15155 1222 aa5.41□□□□□ -1.54
SRP54-211ENST00000556445 RASA2Q15283 850 aa5.41□□□□□ -1.54
SRP54-211ENST00000556445 SMAD1Q15797 465 aaKnown RBP5.41□□□□□ -1.54
SRP54-211ENST00000556445 TSTQ16762 297 aaKnown RBP5.41□□□□□ -1.54
SRP54-211ENST00000556445 UBE2SQ16763 222 aa5.41□□□□□ -1.54
SRP54-211ENST00000556445 TMEM119Q4V9L6 283 aa5.41□□□□□ -1.54
SRP54-211ENST00000556445 PDCD4Q53EL6 469 aaKnown RBP5.41□□□□□ -1.54
SRP54-211ENST00000556445 FAM102AQ5T9C2 384 aaPredicted RBP5.41□□□□□ -1.54
SRP54-211ENST00000556445 KAZNQ674X7 775 aa5.41□□□□□ -1.54
SRP54-211ENST00000556445 KLHL10Q6JEL2 608 aa5.41□□□□□ -1.54
SRP54-211ENST00000556445 LIN54Q6MZP7 749 aa5.41□□□□□ -1.54
SRP54-211ENST00000556445 USP17L6PQ6QN14 398 aa5.41□□□□□ -1.54
SRP54-211ENST00000556445 FAM180AQ6UWF9 173 aa5.41□□□□□ -1.54
SRP54-211ENST00000556445 ABRAXAS1Q6UWZ7 409 aa5.41□□□□□ -1.54
SRP54-211ENST00000556445 B4GALNT4Q76KP1 1039 aa5.41□□□□□ -1.54
SRP54-211ENST00000556445 SESTD1Q86VW0 696 aa5.41□□□□□ -1.54
SRP54-211ENST00000556445 VSTM4Q8IW00 320 aa5.41□□□□□ -1.54
SRP54-211ENST00000556445 CCDC65Q8IXS2 484 aa5.41□□□□□ -1.54
SRP54-211ENST00000556445 GPC2Q8N158 579 aa5.41□□□□□ -1.54
SRP54-211ENST00000556445 OR2I1PQ8NGU4 316 aa5.41□□□□□ -1.54
SRP54-211ENST00000556445 ZFP28Q8NHY6 868 aa5.41□□□□□ -1.54
SRP54-211ENST00000556445 IL31RAQ8NI17 732 aa5.41□□□□□ -1.54
SRP54-211ENST00000556445 NELFBQ8WX92 580 aa5.41□□□□□ -1.54
SRP54-211ENST00000556445 STON2Q8WXE9 905 aa5.41□□□□□ -1.54
SRP54-211ENST00000556445 RAD54LQ92698 747 aa5.41□□□□□ -1.54
SRP54-211ENST00000556445 CCDC51Q96ER9 411 aa5.41□□□□□ -1.54
SRP54-211ENST00000556445 MYEOVQ96EZ4 313 aa5.41□□□□□ -1.54
SRP54-211ENST00000556445 MSLNLQ96KJ4 702 aa5.41□□□□□ -1.54
SRP54-211ENST00000556445 HEPHQ9BQS7 1158 aa5.41□□□□□ -1.54
SRP54-211ENST00000556445 PI4K2AQ9BTU6 479 aa5.41□□□□□ -1.54
SRP54-211ENST00000556445 WDR11Q9BZH6 1224 aa5.41□□□□□ -1.54
SRP54-211ENST00000556445 SENP6Q9GZR1 1112 aaPredicted RBP5.41□□□□□ -1.54
SRP54-211ENST00000556445 PAIP1Q9H074 479 aaKnown RBP5.41□□□□□ -1.54
SRP54-211ENST00000556445 C2orf40Q9H1Z8 148 aa5.41□□□□□ -1.54
SRP54-211ENST00000556445 THAP9Q9H5L6 903 aa5.41□□□□□ -1.54
SRP54-211ENST00000556445 XAB2Q9HCS7 855 aaKnown RBP5.41□□□□□ -1.54
SRP54-211ENST00000556445 AKIP1Q9NQ31 210 aa5.41□□□□□ -1.54
SRP54-211ENST00000556445 KRT84Q9NSB2 600 aa5.41□□□□□ -1.54
SRP54-211ENST00000556445 TMOD4Q9NZQ9 345 aa5.41□□□□□ -1.54
SRP54-211ENST00000556445 MYO1AQ9UBC5 1043 aa5.41□□□□□ -1.54
SRP54-211ENST00000556445 DKK2Q9UBU2 259 aa5.41□□□□□ -1.54
SRP54-211ENST00000556445 BLOC1S6Q9UL45 172 aa5.41□□□□□ -1.54
SRP54-211ENST00000556445 ATAD5Q96QE3 1844 aa5.41□□□□□ -1.54
SRP54-211ENST00000556445 A0A087WWV3 80 aa5.4□□□□□ -1.54
SRP54-211ENST00000556445 CENPVL1A0A0U1RR11 272 aa5.4□□□□□ -1.54
SRP54-211ENST00000556445 GAGE12BA1L429 117 aa5.4□□□□□ -1.54
SRP54-211ENST00000556445 GAGE12HA6NDE8 117 aa5.4□□□□□ -1.54
SRP54-211ENST00000556445 GOLGA6L9A6NEM1 432 aa5.4□□□□□ -1.54
SRP54-211ENST00000556445 TMEM200CA6NKL6 621 aa5.4□□□□□ -1.54
SRP54-211ENST00000556445 DIRC3C9JPN6 131 aa5.4□□□□□ -1.54
SRP54-211ENST00000556445 MYO1FO00160 1098 aa5.4□□□□□ -1.54
SRP54-211ENST00000556445 RNASET2O00584 256 aaKnown RBP5.4□□□□□ -1.54
SRP54-211ENST00000556445 SLC7A4O43246 635 aa5.4□□□□□ -1.54
SRP54-211ENST00000556445 SLC37A4O43826 429 aa5.4□□□□□ -1.54
SRP54-211ENST00000556445 KLRC4O43908 158 aa5.4□□□□□ -1.54
SRP54-211ENST00000556445 STX10O60499 249 aa5.4□□□□□ -1.54
SRP54-211ENST00000556445 B3GALNT1O75752 331 aa5.4□□□□□ -1.54
SRP54-211ENST00000556445 FAM155BO75949 473 aa5.4□□□□□ -1.54
SRP54-211ENST00000556445 ABHD16AO95870 558 aa5.4□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms