RNA–Protein interactions for RNA: ENST00000554514.1

ARHGEF40-203, Transcript of Rho guanine nucleotide exchange factor 40, humanhuman

TSL 1 (best)

Gene ARHGEF40, Length 2,928 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40-203ENST00000554514 RNF111Q6ZNA4 994 aa15.94■□□□□ 0.14
ARHGEF40-203ENST00000554514 ATPAF2Q8N5M1 289 aa15.94■□□□□ 0.14
ARHGEF40-203ENST00000554514 RNF148Q8N7C7 305 aa15.94■□□□□ 0.14
ARHGEF40-203ENST00000554514 ZNF419Q96HQ0 510 aaPredicted RBP15.94■□□□□ 0.14
ARHGEF40-203ENST00000554514 CATSPER2Q96P56 530 aa15.94■□□□□ 0.14
ARHGEF40-203ENST00000554514 EBF3Q9H4W6 596 aa15.94■□□□□ 0.14
ARHGEF40-203ENST00000554514 FAM96AQ9H5X1 160 aa15.94■□□□□ 0.14
ARHGEF40-203ENST00000554514 PIDD1Q9HB75 910 aa15.94■□□□□ 0.14
ARHGEF40-203ENST00000554514 SPON1Q9HCB6 807 aa15.94■□□□□ 0.14
ARHGEF40-203ENST00000554514 NDFIP2Q9NV92 336 aa15.94■□□□□ 0.14
ARHGEF40-203ENST00000554514 SLC38A7Q9NVC3 462 aa15.94■□□□□ 0.14
ARHGEF40-203ENST00000554514 ADAMTS6Q9UKP5 1117 aa15.94■□□□□ 0.14
ARHGEF40-203ENST00000554514 POMPQ9Y244 141 aa15.94■□□□□ 0.14
ARHGEF40-203ENST00000554514 TSC2P49815 1807 aa15.93■□□□□ 0.14
ARHGEF40-203ENST00000554514 HAS3O00219 553 aa15.93■□□□□ 0.14
ARHGEF40-203ENST00000554514 GABRB3P28472 473 aa15.93■□□□□ 0.14
ARHGEF40-203ENST00000554514 CXCR3P49682 368 aa15.93■□□□□ 0.14
ARHGEF40-203ENST00000554514 NOMO2Q5JPE7 1267 aa15.93■□□□□ 0.14
ARHGEF40-203ENST00000554514 ZNF280DQ6N043 979 aa15.93■□□□□ 0.14
ARHGEF40-203ENST00000554514 ZC3HC1Q86WB0 502 aaKnown RBP15.93■□□□□ 0.14
ARHGEF40-203ENST00000554514 SNX32Q86XE0 403 aa15.93■□□□□ 0.14
ARHGEF40-203ENST00000554514 RNF135Q8IUD6 432 aa15.93■□□□□ 0.14
ARHGEF40-203ENST00000554514 OXSMQ9NWU1 459 aa15.93■□□□□ 0.14
ARHGEF40-203ENST00000554514 ARHGAP26Q9UNA1 814 aa15.93■□□□□ 0.14
ARHGEF40-203ENST00000554514 SLC45A1Q9Y2W3 748 aa15.93■□□□□ 0.14
ARHGEF40-203ENST00000554514 F8W810 466 aa15.93■□□□□ 0.14
ARHGEF40-203ENST00000554514 MTSS1O43312 755 aa15.93■□□□□ 0.14
ARHGEF40-203ENST00000554514 FKBP6O75344 327 aa15.93■□□□□ 0.14
ARHGEF40-203ENST00000554514 F9P00740 461 aa15.93■□□□□ 0.14
ARHGEF40-203ENST00000554514 JUNP05412 331 aaKnown RBP15.93■□□□□ 0.14
ARHGEF40-203ENST00000554514 ALOX15P16050 662 aaPredicted RBP15.93■□□□□ 0.14
ARHGEF40-203ENST00000554514 CHRNA4P43681 627 aa15.93■□□□□ 0.14
ARHGEF40-203ENST00000554514 PGFP49763 221 aa15.93■□□□□ 0.14
ARHGEF40-203ENST00000554514 AIF1P55008 147 aa15.93■□□□□ 0.14
ARHGEF40-203ENST00000554514 RAB41Q5JT25 222 aa15.93■□□□□ 0.14
ARHGEF40-203ENST00000554514 TMCO4Q5TGY1 634 aa15.93■□□□□ 0.14
ARHGEF40-203ENST00000554514 DHDDSQ86SQ9 333 aa15.93■□□□□ 0.14
ARHGEF40-203ENST00000554514 TBL1YQ9BQ87 522 aa15.93■□□□□ 0.14
ARHGEF40-203ENST00000554514 GPAMQ9HCL2 828 aa15.93■□□□□ 0.14
ARHGEF40-203ENST00000554514 ZDHHC2Q9UIJ5 367 aa15.93■□□□□ 0.14
ARHGEF40-203ENST00000554514 CDH9Q9ULB4 789 aa15.93■□□□□ 0.14
ARHGEF40-203ENST00000554514 ERI2A8K979 691 aaKnown RBP15.92■□□□□ 0.14
ARHGEF40-203ENST00000554514 TMEM233B4DJY2 109 aa15.92■□□□□ 0.14
ARHGEF40-203ENST00000554514 C9IYK1 514 aa15.92■□□□□ 0.14
ARHGEF40-203ENST00000554514 RAG1P15918 1043 aa15.92■□□□□ 0.14
ARHGEF40-203ENST00000554514 PEX2P28328 305 aa15.92■□□□□ 0.14
ARHGEF40-203ENST00000554514 GJA9P57773 515 aa15.92■□□□□ 0.14
ARHGEF40-203ENST00000554514 MRPS6P82932 125 aaKnown RBP15.92■□□□□ 0.14
ARHGEF40-203ENST00000554514 CACNB2Q08289 660 aaPredicted RBP15.92■□□□□ 0.14
ARHGEF40-203ENST00000554514 LSM12Q3MHD2 195 aaKnown RBP15.92■□□□□ 0.14
ARHGEF40-203ENST00000554514 SEL1L3Q68CR1 1132 aa15.92■□□□□ 0.14
ARHGEF40-203ENST00000554514 CXCL17Q6UXB2 119 aa15.92■□□□□ 0.14
ARHGEF40-203ENST00000554514 ISLR2Q6UXK2 745 aa15.92■□□□□ 0.14
ARHGEF40-203ENST00000554514 FSTL5Q8N475 847 aaPredicted RBP15.92■□□□□ 0.14
ARHGEF40-203ENST00000554514 ZSCAN18Q8TBC5 510 aaPredicted RBP15.92■□□□□ 0.14
ARHGEF40-203ENST00000554514 ACTRT2Q8TDY3 377 aa15.92■□□□□ 0.14
ARHGEF40-203ENST00000554514 ISL2Q96A47 359 aa15.92■□□□□ 0.14
ARHGEF40-203ENST00000554514 MPP6Q9NZW5 540 aa15.92■□□□□ 0.14
ARHGEF40-203ENST00000554514 XPR1Q9UBH6 696 aa15.92■□□□□ 0.14
ARHGEF40-203ENST00000554514 MAGEB16A2A368 324 aa15.92■□□□□ 0.14
ARHGEF40-203ENST00000554514 TXNDC9O14530 226 aa15.92■□□□□ 0.14
ARHGEF40-203ENST00000554514 CCNT2O60583 730 aaKnown RBP15.92■□□□□ 0.14
ARHGEF40-203ENST00000554514 HCAR3P49019 387 aa15.92■□□□□ 0.14
ARHGEF40-203ENST00000554514 CSE1LP55060 971 aaKnown RBP15.92■□□□□ 0.14
ARHGEF40-203ENST00000554514 TRIP10Q15642 601 aa15.92■□□□□ 0.14
ARHGEF40-203ENST00000554514 FAM219BQ5XKK7 198 aa15.92■□□□□ 0.14
ARHGEF40-203ENST00000554514 AGMOQ6ZNB7 445 aa15.92■□□□□ 0.14
ARHGEF40-203ENST00000554514 TMC7Q7Z402 723 aa15.92■□□□□ 0.14
ARHGEF40-203ENST00000554514 CEP97Q8IW35 865 aa15.92■□□□□ 0.14
ARHGEF40-203ENST00000554514 TMEM86AQ8N2M4 240 aa15.92■□□□□ 0.14
ARHGEF40-203ENST00000554514 OR6Y1Q8NGX8 325 aa15.92■□□□□ 0.14
ARHGEF40-203ENST00000554514 USP13Q92995 863 aaPredicted RBP15.92■□□□□ 0.14
ARHGEF40-203ENST00000554514 NXNL1Q96CM4 212 aa15.92■□□□□ 0.14
ARHGEF40-203ENST00000554514 ELMO2Q96JJ3 720 aa15.92■□□□□ 0.14
ARHGEF40-203ENST00000554514 RTP3Q9BQQ7 232 aa15.92■□□□□ 0.14
ARHGEF40-203ENST00000554514 SYT17Q9BSW7 474 aa15.92■□□□□ 0.14
ARHGEF40-203ENST00000554514 MAGEA13PA6NCF6 341 aa15.91■□□□□ 0.14
ARHGEF40-203ENST00000554514 SBK3P0C264 359 aa15.91■□□□□ 0.14
ARHGEF40-203ENST00000554514 SLC35E2BP0CK96 405 aa15.91■□□□□ 0.14
ARHGEF40-203ENST00000554514 GNAT1P11488 350 aa15.91■□□□□ 0.14
ARHGEF40-203ENST00000554514 PIK3R1P27986 724 aa15.91■□□□□ 0.14
ARHGEF40-203ENST00000554514 PCSK1P29120 753 aa15.91■□□□□ 0.14
ARHGEF40-203ENST00000554514 LBRQ14739 615 aaKnown RBP15.91■□□□□ 0.14
ARHGEF40-203ENST00000554514 SFT2D3Q587I9 215 aa15.91■□□□□ 0.14
ARHGEF40-203ENST00000554514 SPRYD7Q5W111 196 aa15.91■□□□□ 0.14
ARHGEF40-203ENST00000554514 FBXW8Q8N3Y1 598 aa15.91■□□□□ 0.14
ARHGEF40-203ENST00000554514 GDPD5Q8WTR4 605 aa15.91■□□□□ 0.14
ARHGEF40-203ENST00000554514 GPR22Q99680 433 aa15.91■□□□□ 0.14
ARHGEF40-203ENST00000554514 FSD1LQ9BXM9 530 aa15.91■□□□□ 0.14
ARHGEF40-203ENST00000554514 TTC3P53804 2025 aa15.91■□□□□ 0.14
ARHGEF40-203ENST00000554514 TMEM114B3SHH9 223 aa15.91■□□□□ 0.14
ARHGEF40-203ENST00000554514 BUD23O43709 281 aaKnown RBP15.91■□□□□ 0.14
ARHGEF40-203ENST00000554514 CELF2O95319 508 aaKnown RBP15.91■□□□□ 0.14
ARHGEF40-203ENST00000554514 MYL4P12829 197 aa15.91■□□□□ 0.14
ARHGEF40-203ENST00000554514 RPL14P50914 215 aaKnown RBP15.91■□□□□ 0.14
ARHGEF40-203ENST00000554514 PKNOX1P55347 436 aa15.91■□□□□ 0.14
ARHGEF40-203ENST00000554514 PURAQ00577 322 aaKnown RBP15.91■□□□□ 0.14
ARHGEF40-203ENST00000554514 CNGA3Q16281 694 aa15.91■□□□□ 0.14
ARHGEF40-203ENST00000554514 GNASQ5JWF2 1037 aa15.91■□□□□ 0.14
ARHGEF40-203ENST00000554514 LIPMQ5VYY2 423 aa15.91■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms