RNA–Protein interactions for RNA: ENST00000554390.5

PPP4R3A-202, Transcript of protein phosphatase 4 regulatory subunit 3A, humanhuman

TSL 1 (best)

Gene PPP4R3A, Length 2,953 nt, Biotype non stop decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3A-202ENST00000554390 K7EPI3 171 aa17.21■□□□□ 0.35
PPP4R3A-202ENST00000554390 ZBTB11O95625 1053 aaPredicted RBP17.21■□□□□ 0.35
PPP4R3A-202ENST00000554390 MAGEA6P43360 314 aa17.21■□□□□ 0.35
PPP4R3A-202ENST00000554390 C21orf59P57076 290 aa17.21■□□□□ 0.35
PPP4R3A-202ENST00000554390 RAB15P59190 212 aa17.21■□□□□ 0.35
PPP4R3A-202ENST00000554390 ESRRGP62508 458 aa17.21■□□□□ 0.35
PPP4R3A-202ENST00000554390 NME3Q13232 169 aa17.21■□□□□ 0.35
PPP4R3A-202ENST00000554390 MXD4Q14582 209 aaPredicted RBP17.21■□□□□ 0.35
PPP4R3A-202ENST00000554390 CENPSQ8N2Z9 138 aa17.21■□□□□ 0.35
PPP4R3A-202ENST00000554390 TDRD5Q8NAT2 981 aaKnown RBP17.21■□□□□ 0.35
PPP4R3A-202ENST00000554390 LRTOMTQ8WZ04 291 aa17.21■□□□□ 0.35
PPP4R3A-202ENST00000554390 TBCBQ99426 244 aa17.21■□□□□ 0.35
PPP4R3A-202ENST00000554390 NEURL2Q9BR09 285 aa17.21■□□□□ 0.35
PPP4R3A-202ENST00000554390 FZD8Q9H461 694 aa17.21■□□□□ 0.35
PPP4R3A-202ENST00000554390 TXNDC16Q9P2K2 825 aa17.21■□□□□ 0.35
PPP4R3A-202ENST00000554390 HESX1Q9UBX0 185 aa17.21■□□□□ 0.35
PPP4R3A-202ENST00000554390 ADAMTS5Q9UNA0 930 aa17.21■□□□□ 0.35
PPP4R3A-202ENST00000554390 PHIPQ8WWQ0 1821 aa17.2■□□□□ 0.34
PPP4R3A-202ENST00000554390 ATE1O95260 518 aa17.2■□□□□ 0.34
PPP4R3A-202ENST00000554390 ZNF12P17014 697 aa17.2■□□□□ 0.34
PPP4R3A-202ENST00000554390 ART3Q13508 389 aa17.2■□□□□ 0.34
PPP4R3A-202ENST00000554390 ITGA7Q13683 1181 aa17.2■□□□□ 0.34
PPP4R3A-202ENST00000554390 DPYSQ14117 519 aa17.2■□□□□ 0.34
PPP4R3A-202ENST00000554390 ZNF460Q14592 562 aa17.2■□□□□ 0.34
PPP4R3A-202ENST00000554390 DCAF6Q58WW2 860 aa17.2■□□□□ 0.34
PPP4R3A-202ENST00000554390 SLC9A4Q6AI14 798 aa17.2■□□□□ 0.34
PPP4R3A-202ENST00000554390 XKR5Q6UX68 686 aa17.2■□□□□ 0.34
PPP4R3A-202ENST00000554390 HM13Q8TCT9 377 aa17.2■□□□□ 0.34
PPP4R3A-202ENST00000554390 ARNTL2Q8WYA1 636 aa17.2■□□□□ 0.34
PPP4R3A-202ENST00000554390 RTP4Q96DX8 246 aa17.2■□□□□ 0.34
PPP4R3A-202ENST00000554390 MFSD3Q96ES6 412 aa17.2■□□□□ 0.34
PPP4R3A-202ENST00000554390 ZMAT2Q96NC0 199 aaKnown RBP17.2■□□□□ 0.34
PPP4R3A-202ENST00000554390 GGA3Q9NZ52 723 aa17.2■□□□□ 0.34
PPP4R3A-202ENST00000554390 KLK14Q9P0G3 267 aa17.2■□□□□ 0.34
PPP4R3A-202ENST00000554390 FADS3Q9Y5Q0 445 aa17.2■□□□□ 0.34
PPP4R3A-202ENST00000554390 PTPRFP10586 1907 aa17.2■□□□□ 0.34
PPP4R3A-202ENST00000554390 PALM2-AKAP2B1ALY0 433 aaPredicted RBP17.2■□□□□ 0.34
PPP4R3A-202ENST00000554390 RNF103O00237 685 aa17.2■□□□□ 0.34
PPP4R3A-202ENST00000554390 INSRRP14616 1297 aa17.2■□□□□ 0.34
PPP4R3A-202ENST00000554390 MX2P20592 715 aa17.2■□□□□ 0.34
PPP4R3A-202ENST00000554390 MPSTP25325 297 aa17.2■□□□□ 0.34
PPP4R3A-202ENST00000554390 SURF1Q15526 300 aa17.2■□□□□ 0.34
PPP4R3A-202ENST00000554390 NCBP2-AS2Q69YL0 99 aa17.2■□□□□ 0.34
PPP4R3A-202ENST00000554390 NXNQ6DKJ4 435 aa17.2■□□□□ 0.34
PPP4R3A-202ENST00000554390 NANOGP8Q6NSW7 305 aa17.2■□□□□ 0.34
PPP4R3A-202ENST00000554390 RWDD4Q6NW29 188 aaKnown RBP17.2■□□□□ 0.34
PPP4R3A-202ENST00000554390 RPS27LQ71UM5 84 aaKnown RBP17.2■□□□□ 0.34
PPP4R3A-202ENST00000554390 DCLK2Q8N568 766 aa17.2■□□□□ 0.34
PPP4R3A-202ENST00000554390 TMA16Q96EY4 203 aaKnown RBP17.2■□□□□ 0.34
PPP4R3A-202ENST00000554390 GPATCH1Q9BRR8 931 aaKnown RBP17.2■□□□□ 0.34
PPP4R3A-202ENST00000554390 TRPV6Q9H1D0 765 aa17.2■□□□□ 0.34
PPP4R3A-202ENST00000554390 HIPK3Q9H422 1215 aa17.2■□□□□ 0.34
PPP4R3A-202ENST00000554390 PDZD7Q9H5P4 517 aa17.2■□□□□ 0.34
PPP4R3A-202ENST00000554390 HOXC10Q9NYD6 342 aa17.2■□□□□ 0.34
PPP4R3A-202ENST00000554390 SPATA7Q9P0W8 599 aa17.2■□□□□ 0.34
PPP4R3A-202ENST00000554390 SLC8A2Q9UPR5 921 aa17.2■□□□□ 0.34
PPP4R3A-202ENST00000554390 AP4S1Q9Y587 144 aa17.2■□□□□ 0.34
PPP4R3A-202ENST00000554390 BCLAF3A2AJT9 711 aaKnown RBP17.19■□□□□ 0.34
PPP4R3A-202ENST00000554390 H0YJX3 145 aa17.19■□□□□ 0.34
PPP4R3A-202ENST00000554390 ATP1A4Q13733 1029 aa17.19■□□□□ 0.34
PPP4R3A-202ENST00000554390 LSM12Q3MHD2 195 aaKnown RBP17.19■□□□□ 0.34
PPP4R3A-202ENST00000554390 ZBED5Q49AG3 693 aa17.19■□□□□ 0.34
PPP4R3A-202ENST00000554390 BOLA3Q53S33 107 aa17.19■□□□□ 0.34
PPP4R3A-202ENST00000554390 KDELC2Q7Z4H8 507 aa17.19■□□□□ 0.34
PPP4R3A-202ENST00000554390 HTR3CQ8WXA8 447 aa17.19■□□□□ 0.34
PPP4R3A-202ENST00000554390 ZNF669Q96BR6 464 aaPredicted RBP17.19■□□□□ 0.34
PPP4R3A-202ENST00000554390 SGF29Q96ES7 293 aa17.19■□□□□ 0.34
PPP4R3A-202ENST00000554390 CNDP1Q96KN2 507 aa17.19■□□□□ 0.34
PPP4R3A-202ENST00000554390 GJD2Q9UKL4 321 aa17.19■□□□□ 0.34
PPP4R3A-202ENST00000554390 SNX10Q9Y5X0 201 aa17.19■□□□□ 0.34
PPP4R3A-202ENST00000554390 RLFQ13129 1914 aa17.19■□□□□ 0.34
PPP4R3A-202ENST00000554390 LCTP09848 1927 aa17.19■□□□□ 0.34
PPP4R3A-202ENST00000554390 TK2O00142 265 aa17.19■□□□□ 0.34
PPP4R3A-202ENST00000554390 PRAMEP78395 509 aa17.19■□□□□ 0.34
PPP4R3A-202ENST00000554390 SLC6A3Q01959 620 aa17.19■□□□□ 0.34
PPP4R3A-202ENST00000554390 FAM47BQ8NA70 645 aa17.19■□□□□ 0.34
PPP4R3A-202ENST00000554390 TXNRD2Q9NNW7 524 aa17.19■□□□□ 0.34
PPP4R3A-202ENST00000554390 TRNAU1APQ9NX07 287 aaKnown RBP17.19■□□□□ 0.34
PPP4R3A-202ENST00000554390 TRIM17Q9Y577 477 aa17.19■□□□□ 0.34
PPP4R3A-202ENST00000554390 PARP14Q460N5 1801 aa17.19■□□□□ 0.34
PPP4R3A-202ENST00000554390 TMEM233B4DJY2 109 aa17.19■□□□□ 0.34
PPP4R3A-202ENST00000554390 CLDN5O00501 218 aa17.19■□□□□ 0.34
PPP4R3A-202ENST00000554390 PHGDHO43175 533 aaKnown RBP17.19■□□□□ 0.34
PPP4R3A-202ENST00000554390 ZBTB7AO95365 584 aa17.19■□□□□ 0.34
PPP4R3A-202ENST00000554390 AKAP5P24588 427 aa17.19■□□□□ 0.34
PPP4R3A-202ENST00000554390 ICAM3P32942 547 aa17.19■□□□□ 0.34
PPP4R3A-202ENST00000554390 NDUFV1P49821 464 aa17.19■□□□□ 0.34
PPP4R3A-202ENST00000554390 PID1Q7Z2X4 250 aa17.19■□□□□ 0.34
PPP4R3A-202ENST00000554390 P2RY11Q96G91 374 aa17.19■□□□□ 0.34
PPP4R3A-202ENST00000554390 CIB1Q99828 191 aa17.19■□□□□ 0.34
PPP4R3A-202ENST00000554390 SNX15Q9NRS6 342 aa17.19■□□□□ 0.34
PPP4R3A-202ENST00000554390 ITGB1BP2Q9UKP3 347 aa17.19■□□□□ 0.34
PPP4R3A-202ENST00000554390 MT-CO1P00395 513 aa17.18■□□□□ 0.34
PPP4R3A-202ENST00000554390 TXNP10599 105 aaKnown RBP17.18■□□□□ 0.34
PPP4R3A-202ENST00000554390 TMED10P49755 219 aaKnown RBP17.18■□□□□ 0.34
PPP4R3A-202ENST00000554390 NIPAL4Q0D2K0 466 aa17.18■□□□□ 0.34
PPP4R3A-202ENST00000554390 INSCQ1MX18 579 aa17.18■□□□□ 0.34
PPP4R3A-202ENST00000554390 MTX3Q5HYI7 312 aa17.18■□□□□ 0.34
PPP4R3A-202ENST00000554390 CERCAMQ5T4B2 595 aa17.18■□□□□ 0.34
PPP4R3A-202ENST00000554390 C16orf87Q6PH81 154 aa17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms