RNA–Protein interactions for RNA: ENST00000554264.5

VPS33B-203, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 4

Gene VPS33B, Length 389 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-203ENST00000554264 TAAR1Q96RJ0 339 aa6.12□□□□□ -1.43
VPS33B-203ENST00000554264 FIZ1Q96SL8 496 aa6.12□□□□□ -1.43
VPS33B-203ENST00000554264 RMDN3Q96TC7 470 aa6.12□□□□□ -1.43
VPS33B-203ENST00000554264 ZFYVE21Q9BQ24 234 aa6.12□□□□□ -1.43
VPS33B-203ENST00000554264 SIKE1Q9BRV8 207 aa6.12□□□□□ -1.43
VPS33B-203ENST00000554264 FRMD8Q9BZ67 464 aaPredicted RBP6.12□□□□□ -1.43
VPS33B-203ENST00000554264 DCLK3Q9C098 648 aa6.12□□□□□ -1.43
VPS33B-203ENST00000554264 FAM192AQ9GZU8 254 aa6.12□□□□□ -1.43
VPS33B-203ENST00000554264 IPPKQ9H8X2 491 aa6.12□□□□□ -1.43
VPS33B-203ENST00000554264 ANKEF1Q9NU02 776 aa6.12□□□□□ -1.43
VPS33B-203ENST00000554264 TBC1D22BQ9NU19 505 aa6.12□□□□□ -1.43
VPS33B-203ENST00000554264 ABCF3Q9NUQ8 709 aa6.12□□□□□ -1.43
VPS33B-203ENST00000554264 EURLQ9NYK6 297 aa6.12□□□□□ -1.43
VPS33B-203ENST00000554264 DNAJB4Q9UDY4 337 aa6.12□□□□□ -1.43
VPS33B-203ENST00000554264 AJAP1Q9UKB5 411 aaPredicted RBP6.12□□□□□ -1.43
VPS33B-203ENST00000554264 NR2E1Q9Y466 385 aa6.12□□□□□ -1.43
VPS33B-203ENST00000554264 PCDHB2Q9Y5E7 798 aa6.12□□□□□ -1.43
VPS33B-203ENST00000554264 EXOC1LA0A1B0GW35 172 aa6.11□□□□□ -1.43
VPS33B-203ENST00000554264 SMIM23A6NLE4 172 aa6.11□□□□□ -1.43
VPS33B-203ENST00000554264 LOC730098B7Z3J9 87 aa6.11□□□□□ -1.43
VPS33B-203ENST00000554264 RASA4BC9J798 803 aa6.11□□□□□ -1.43
VPS33B-203ENST00000554264 GRM6O15303 877 aa6.11□□□□□ -1.43
VPS33B-203ENST00000554264 RASA4O43374 803 aa6.11□□□□□ -1.43
VPS33B-203ENST00000554264 EDF1O60869 148 aaKnown RBP6.11□□□□□ -1.43
VPS33B-203ENST00000554264 DIAPH2O60879 1101 aa6.11□□□□□ -1.43
VPS33B-203ENST00000554264 DNAJC6O75061 913 aa6.11□□□□□ -1.43
VPS33B-203ENST00000554264 TBX10O75333 385 aa6.11□□□□□ -1.43
VPS33B-203ENST00000554264 FAM155BO75949 473 aa6.11□□□□□ -1.43
VPS33B-203ENST00000554264 PROSCO94903 275 aa6.11□□□□□ -1.43
VPS33B-203ENST00000554264 ACSL3O95573 720 aa6.11□□□□□ -1.43
VPS33B-203ENST00000554264 ASMTLO95671 621 aa6.11□□□□□ -1.43
VPS33B-203ENST00000554264 SOD2P04179 222 aa6.11□□□□□ -1.43
VPS33B-203ENST00000554264 GNAT1P11488 350 aa6.11□□□□□ -1.43
VPS33B-203ENST00000554264 COL6A2P12110 1019 aa6.11□□□□□ -1.43
VPS33B-203ENST00000554264 KRT15P19012 456 aa6.11□□□□□ -1.43
VPS33B-203ENST00000554264 TAC1P20366 129 aa6.11□□□□□ -1.43
VPS33B-203ENST00000554264 TBXAS1P24557 533 aaPredicted RBP6.11□□□□□ -1.43
VPS33B-203ENST00000554264 IVDP26440 423 aa6.11□□□□□ -1.43
VPS33B-203ENST00000554264 MARK3P27448 753 aa6.11□□□□□ -1.43
VPS33B-203ENST00000554264 PTPN4P29074 926 aa6.11□□□□□ -1.43
VPS33B-203ENST00000554264 NMT1P30419 496 aaKnown RBP6.11□□□□□ -1.43
VPS33B-203ENST00000554264 HOXC8P31273 242 aa6.11□□□□□ -1.43
VPS33B-203ENST00000554264 NSFP46459 744 aaKnown RBP6.11□□□□□ -1.43
VPS33B-203ENST00000554264 JAK3P52333 1124 aa6.11□□□□□ -1.43
VPS33B-203ENST00000554264 AP3M2P53677 418 aa6.11□□□□□ -1.43
VPS33B-203ENST00000554264 ITGA8P53708 1063 aa6.11□□□□□ -1.43
VPS33B-203ENST00000554264 LINC00310P59036 64 aa6.11□□□□□ -1.43
VPS33B-203ENST00000554264 KCNJ2P63252 427 aa6.11□□□□□ -1.43
VPS33B-203ENST00000554264 SARNPP82979 210 aaKnown RBP6.11□□□□□ -1.43
VPS33B-203ENST00000554264 FMO1Q01740 532 aa6.11□□□□□ -1.43
VPS33B-203ENST00000554264 OCRLQ01968 901 aa6.11□□□□□ -1.43
VPS33B-203ENST00000554264 CYP4A11Q02928 519 aa6.11□□□□□ -1.43
VPS33B-203ENST00000554264 KLC1Q07866 573 aa6.11□□□□□ -1.43
VPS33B-203ENST00000554264 SLC9A5Q14940 896 aa6.11□□□□□ -1.43
VPS33B-203ENST00000554264 SEPT7Q16181 437 aaKnown RBP6.11□□□□□ -1.43
VPS33B-203ENST00000554264 LONRF1Q17RB8 773 aa6.11□□□□□ -1.43
VPS33B-203ENST00000554264 ZC3H12BQ5HYM0 836 aaKnown RBP6.11□□□□□ -1.43
VPS33B-203ENST00000554264 CELF3Q5SZQ8 465 aaKnown RBP6.11□□□□□ -1.43
VPS33B-203ENST00000554264 C6orf163Q5TEZ5 329 aa6.11□□□□□ -1.43
VPS33B-203ENST00000554264 AP1ARQ63HQ0 302 aa6.11□□□□□ -1.43
VPS33B-203ENST00000554264 CDCA2Q69YH5 1023 aaPredicted RBP6.11□□□□□ -1.43
VPS33B-203ENST00000554264 MIS18BP1Q6P0N0 1132 aa6.11□□□□□ -1.43
VPS33B-203ENST00000554264 GJB7Q6PEY0 223 aa6.11□□□□□ -1.43
VPS33B-203ENST00000554264 MILR1Q7Z6M3 343 aa6.11□□□□□ -1.43
VPS33B-203ENST00000554264 NOP9Q86U38 636 aaKnown RBP6.11□□□□□ -1.43
VPS33B-203ENST00000554264 TRABD2AQ86V40 505 aa6.11□□□□□ -1.43
VPS33B-203ENST00000554264 CCDC25Q86WR0 208 aa6.11□□□□□ -1.43
VPS33B-203ENST00000554264 DCP2Q8IU60 420 aaKnown RBP6.11□□□□□ -1.43
VPS33B-203ENST00000554264 MFN1Q8IWA4 741 aa6.11□□□□□ -1.43
VPS33B-203ENST00000554264 TPH2Q8IWU9 490 aa6.11□□□□□ -1.43
VPS33B-203ENST00000554264 RBM12BQ8IXT5 1001 aaKnown RBP6.11□□□□□ -1.43
VPS33B-203ENST00000554264 FITM2Q8N6M3 262 aa6.11□□□□□ -1.43
VPS33B-203ENST00000554264 SMRP1Q8NCR6 262 aa6.11□□□□□ -1.43
VPS33B-203ENST00000554264 ZSWIM2Q8NEG5 633 aa6.11□□□□□ -1.43
VPS33B-203ENST00000554264 PUM2Q8TB72 1066 aaKnown RBP eCLIP6.11□□□□□ -1.43
VPS33B-203ENST00000554264 RAB3IL1Q8TBN0 382 aa6.11□□□□□ -1.43
VPS33B-203ENST00000554264 PIP4K2CQ8TBX8 421 aa6.11□□□□□ -1.43
VPS33B-203ENST00000554264 KRT35Q92764 455 aa6.11□□□□□ -1.43
VPS33B-203ENST00000554264 SPDL1Q96EA4 605 aa6.11□□□□□ -1.43
VPS33B-203ENST00000554264 DYDC2Q96IM9 177 aa6.11□□□□□ -1.43
VPS33B-203ENST00000554264 MSLNLQ96KJ4 702 aa6.11□□□□□ -1.43
VPS33B-203ENST00000554264 SIGLEC10Q96LC7 697 aa6.11□□□□□ -1.43
VPS33B-203ENST00000554264 KCNJ15Q99712 375 aa6.11□□□□□ -1.43
VPS33B-203ENST00000554264 ZNF577Q9BSK1 485 aa6.11□□□□□ -1.43
VPS33B-203ENST00000554264 C16orf70Q9BSU1 422 aa6.11□□□□□ -1.43
VPS33B-203ENST00000554264 VPS11Q9H270 941 aa6.11□□□□□ -1.43
VPS33B-203ENST00000554264 VCX3BQ9H321 246 aa6.11□□□□□ -1.43
VPS33B-203ENST00000554264 PXMP2Q9NR77 195 aa6.11□□□□□ -1.43
VPS33B-203ENST00000554264 C1orf112Q9NSG2 853 aa6.11□□□□□ -1.43
VPS33B-203ENST00000554264 DDX56Q9NY93 547 aaKnown RBP6.11□□□□□ -1.43
VPS33B-203ENST00000554264 NINJ2Q9NZG7 142 aa6.11□□□□□ -1.43
VPS33B-203ENST00000554264 HSPBP1Q9NZL4 362 aa6.11□□□□□ -1.43
VPS33B-203ENST00000554264 ADAM22Q9P0K1 906 aa6.11□□□□□ -1.43
VPS33B-203ENST00000554264 CPSF2Q9P2I0 782 aaKnown RBP6.11□□□□□ -1.43
VPS33B-203ENST00000554264 ANKFY1Q9P2R3 1169 aa6.11□□□□□ -1.43
VPS33B-203ENST00000554264 PSMC3IPQ9P2W1 217 aaPredicted RBP6.11□□□□□ -1.43
VPS33B-203ENST00000554264 SCOCQ9UIL1 159 aa6.11□□□□□ -1.43
VPS33B-203ENST00000554264 NUDT5Q9UKK9 219 aa6.11□□□□□ -1.43
VPS33B-203ENST00000554264 AGAP1Q9UPQ3 857 aa6.11□□□□□ -1.43
VPS33B-203ENST00000554264 SSX2IPQ9Y2D8 614 aa6.11□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms