RNA–Protein interactions for RNA: ENST00000553370.5

ACTN1-208, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 605 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-208ENST00000553370 PRNPP04156 253 aa10.16□□□□□ -0.78
ACTN1-208ENST00000553370 THEGLP0DJG4 465 aa10.16□□□□□ -0.78
ACTN1-208ENST00000553370 CKMT2P17540 419 aa10.16□□□□□ -0.78
ACTN1-208ENST00000553370 ACTN2P35609 894 aa10.16□□□□□ -0.78
ACTN1-208ENST00000553370 RPL34P49207 117 aaKnown RBP10.16□□□□□ -0.78
ACTN1-208ENST00000553370 SULT1E1P49888 294 aa10.16□□□□□ -0.78
ACTN1-208ENST00000553370 DNA2P51530 1060 aa10.16□□□□□ -0.78
ACTN1-208ENST00000553370 METAP1P53582 386 aa10.16□□□□□ -0.78
ACTN1-208ENST00000553370 CDH4P55283 916 aa10.16□□□□□ -0.78
ACTN1-208ENST00000553370 CXorf57Q6NSI4 855 aaKnown RBP10.16□□□□□ -0.78
ACTN1-208ENST00000553370 FOXR2Q6PJQ5 311 aa10.16□□□□□ -0.78
ACTN1-208ENST00000553370 KDM7AQ6ZMT4 941 aa10.16□□□□□ -0.78
ACTN1-208ENST00000553370 TFAP2DQ7Z6R9 452 aa10.16□□□□□ -0.78
ACTN1-208ENST00000553370 SH2D3CQ8N5H7 860 aa10.16□□□□□ -0.78
ACTN1-208ENST00000553370 SLC2A13Q96QE2 648 aa10.16□□□□□ -0.78
ACTN1-208ENST00000553370 UBL7Q96S82 380 aaPredicted RBP10.16□□□□□ -0.78
ACTN1-208ENST00000553370 CPXM1Q96SM3 734 aa10.16□□□□□ -0.78
ACTN1-208ENST00000553370 FEM1AQ9BSK4 669 aa10.16□□□□□ -0.78
ACTN1-208ENST00000553370 WDCPQ9H6R7 721 aa10.16□□□□□ -0.78
ACTN1-208ENST00000553370 CNTN6Q9UQ52 1028 aa10.16□□□□□ -0.78
ACTN1-208ENST00000553370 CLCA2Q9UQC9 943 aa10.16□□□□□ -0.78
ACTN1-208ENST00000553370 CA5BQ9Y2D0 317 aa10.16□□□□□ -0.78
ACTN1-208ENST00000553370 HS3ST4Q9Y661 456 aa10.16□□□□□ -0.78
ACTN1-208ENST00000553370 UNC13CQ8NB66 2214 aa10.16□□□□□ -0.78
ACTN1-208ENST00000553370 SMG1Q96Q15 3661 aaKnown RBP10.16□□□□□ -0.78
ACTN1-208ENST00000553370 MGAQ8IWI9 3026 aa10.16□□□□□ -0.78
ACTN1-208ENST00000553370 LRRK1Q38SD2 2015 aa10.16□□□□□ -0.78
ACTN1-208ENST00000553370 A0A087WV48 116 aa10.15□□□□□ -0.78
ACTN1-208ENST00000553370 A0A1W2PQU0 124 aa10.15□□□□□ -0.78
ACTN1-208ENST00000553370 MCF2LO15068 1137 aa10.15□□□□□ -0.78
ACTN1-208ENST00000553370 LZTS3O60299 673 aaPredicted RBP10.15□□□□□ -0.78
ACTN1-208ENST00000553370 SLC9A1P19634 815 aa10.15□□□□□ -0.78
ACTN1-208ENST00000553370 RRM1P23921 792 aa10.15□□□□□ -0.78
ACTN1-208ENST00000553370 CHRNA3P32297 505 aa10.15□□□□□ -0.78
ACTN1-208ENST00000553370 NOS2P35228 1153 aa10.15□□□□□ -0.78
ACTN1-208ENST00000553370 RXRGP48443 463 aa10.15□□□□□ -0.78
ACTN1-208ENST00000553370 PLK1P53350 603 aa10.15□□□□□ -0.78
ACTN1-208ENST00000553370 MARSP56192 900 aaKnown RBP10.15□□□□□ -0.78
ACTN1-208ENST00000553370 SLC6A3Q01959 620 aa10.15□□□□□ -0.78
ACTN1-208ENST00000553370 DEUP1Q05D60 604 aa10.15□□□□□ -0.78
ACTN1-208ENST00000553370 CCDC173Q0VFZ6 552 aa10.15□□□□□ -0.78
ACTN1-208ENST00000553370 RAPGEF1Q13905 1077 aa10.15□□□□□ -0.78
ACTN1-208ENST00000553370 SHBQ15464 509 aa10.15□□□□□ -0.78
ACTN1-208ENST00000553370 FAM102AQ5T9C2 384 aaPredicted RBP10.15□□□□□ -0.78
ACTN1-208ENST00000553370 AGBL4Q5VU57 503 aa10.15□□□□□ -0.78
ACTN1-208ENST00000553370 TMC6Q7Z403 805 aa10.15□□□□□ -0.78
ACTN1-208ENST00000553370 FAM114A1Q8IWE2 563 aa10.15□□□□□ -0.78
ACTN1-208ENST00000553370 ELOA2Q8IYF1 753 aaPredicted RBP10.15□□□□□ -0.78
ACTN1-208ENST00000553370 RYBPQ8N488 228 aaPredicted RBP10.15□□□□□ -0.78
ACTN1-208ENST00000553370 FRS2Q8WU20 508 aa10.15□□□□□ -0.78
ACTN1-208ENST00000553370 CRELD1Q96HD1 420 aa10.15□□□□□ -0.78
ACTN1-208ENST00000553370 FCRL3Q96P31 734 aaPredicted RBP10.15□□□□□ -0.78
ACTN1-208ENST00000553370 LGMNQ99538 433 aa10.15□□□□□ -0.78
ACTN1-208ENST00000553370 PRMT1Q99873 361 aaKnown RBP10.15□□□□□ -0.78
ACTN1-208ENST00000553370 SPON2Q9BUD6 331 aa10.15□□□□□ -0.78
ACTN1-208ENST00000553370 NRSN2Q9GZP1 204 aa10.15□□□□□ -0.78
ACTN1-208ENST00000553370 TKTL2Q9H0I9 626 aa10.15□□□□□ -0.78
ACTN1-208ENST00000553370 ABCG4Q9H172 646 aa10.15□□□□□ -0.78
ACTN1-208ENST00000553370 FZD3Q9NPG1 666 aa10.15□□□□□ -0.78
ACTN1-208ENST00000553370 DNAJC28Q9NX36 388 aa10.15□□□□□ -0.78
ACTN1-208ENST00000553370 RRN3Q9NYV6 651 aa10.15□□□□□ -0.78
ACTN1-208ENST00000553370 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP10.15□□□□□ -0.78
ACTN1-208ENST00000553370 IPO11Q9UI26 975 aaKnown RBP10.15□□□□□ -0.78
ACTN1-208ENST00000553370 SARDHQ9UL12 918 aa10.15□□□□□ -0.78
ACTN1-208ENST00000553370 PIEZO2Q9H5I5 2752 aa10.14□□□□□ -0.79
ACTN1-208ENST00000553370 FAM170AA1A519 330 aa10.14□□□□□ -0.79
ACTN1-208ENST00000553370 A6NNZ2 444 aa10.14□□□□□ -0.79
ACTN1-208ENST00000553370 H3BM21 787 aa10.14□□□□□ -0.79
ACTN1-208ENST00000553370 NEMP1O14524 444 aa10.14□□□□□ -0.79
ACTN1-208ENST00000553370 SIGLEC6O43699 453 aa10.14□□□□□ -0.79
ACTN1-208ENST00000553370 BRINP1O60477 761 aa10.14□□□□□ -0.79
ACTN1-208ENST00000553370 SNAP91O60641 907 aa10.14□□□□□ -0.79
ACTN1-208ENST00000553370 DXOO77932 396 aaKnown RBP10.14□□□□□ -0.79
ACTN1-208ENST00000553370 ENDOD1O94919 500 aa10.14□□□□□ -0.79
ACTN1-208ENST00000553370 ERBB2P04626 1255 aa10.14□□□□□ -0.79
ACTN1-208ENST00000553370 SRCP12931 536 aa10.14□□□□□ -0.79
ACTN1-208ENST00000553370 HNRNPA2B1P22626 353 aaKnown RBP10.14□□□□□ -0.79
ACTN1-208ENST00000553370 OR1E1P30953 314 aa10.14□□□□□ -0.79
ACTN1-208ENST00000553370 IRAK1P51617 712 aa10.14□□□□□ -0.79
ACTN1-208ENST00000553370 BPIFB4P59827 614 aa10.14□□□□□ -0.79
ACTN1-208ENST00000553370 E2F1Q01094 437 aa10.14□□□□□ -0.79
ACTN1-208ENST00000553370 C19orf57Q0VDD7 668 aa10.14□□□□□ -0.79
ACTN1-208ENST00000553370 BRMS1LQ5PSV4 323 aa10.14□□□□□ -0.79
ACTN1-208ENST00000553370 SFMBT2Q5VUG0 894 aa10.14□□□□□ -0.79
ACTN1-208ENST00000553370 BROXQ5VW32 411 aa10.14□□□□□ -0.79
ACTN1-208ENST00000553370 RETSATQ6NUM9 610 aa10.14□□□□□ -0.79
ACTN1-208ENST00000553370 C22orf39Q6P5X5 142 aa10.14□□□□□ -0.79
ACTN1-208ENST00000553370 FBXL19Q6PCT2 694 aa10.14□□□□□ -0.79
ACTN1-208ENST00000553370 OLFML1Q6UWY5 402 aa10.14□□□□□ -0.79
ACTN1-208ENST00000553370 LINGO4Q6UY18 593 aa10.14□□□□□ -0.79
ACTN1-208ENST00000553370 SLC26A9Q7LBE3 791 aa10.14□□□□□ -0.79
ACTN1-208ENST00000553370 HORMAD1Q86X24 394 aa10.14□□□□□ -0.79
ACTN1-208ENST00000553370 SPATS2Q86XZ4 545 aaKnown RBP10.14□□□□□ -0.79
ACTN1-208ENST00000553370 ZNF354CQ86Y25 554 aa10.14□□□□□ -0.79
ACTN1-208ENST00000553370 ZDHHC17Q8IUH5 632 aa10.14□□□□□ -0.79
ACTN1-208ENST00000553370 TMEM35BQ8NCS4 154 aa10.14□□□□□ -0.79
ACTN1-208ENST00000553370 DEPDC7Q96QD5 511 aa10.14□□□□□ -0.79
ACTN1-208ENST00000553370 TNKS2Q9H2K2 1166 aa10.14□□□□□ -0.79
ACTN1-208ENST00000553370 PLCB1Q9NQ66 1216 aa10.14□□□□□ -0.79
ACTN1-208ENST00000553370 IL36AQ9UHA7 158 aa10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms