RNA–Protein interactions for RNA: ENST00000553096.5

BEST3-212, Transcript of bestrophin 3, humanhuman

TSL 1 (best) BASIC

Gene BEST3, Length 2,929 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3-212ENST00000553096 HACE1Q8IYU2 909 aa7.48□□□□□ -1.21
BEST3-212ENST00000553096 DIS3LQ8TF46 1054 aaKnown RBP7.48□□□□□ -1.21
BEST3-212ENST00000553096 TFB1MQ8WVM0 346 aaKnown RBP7.48□□□□□ -1.21
BEST3-212ENST00000553096 ABHD8Q96I13 439 aa7.48□□□□□ -1.21
BEST3-212ENST00000553096 PARK7Q99497 189 aaKnown RBP7.48□□□□□ -1.21
BEST3-212ENST00000553096 SORT1Q99523 831 aa7.48□□□□□ -1.21
BEST3-212ENST00000553096 NXF3Q9H4D5 531 aaKnown RBP7.48□□□□□ -1.21
BEST3-212ENST00000553096 FAM124BQ9H5Z6 455 aaPredicted RBP7.48□□□□□ -1.21
BEST3-212ENST00000553096 UGT1A7Q9HAW7 530 aa7.48□□□□□ -1.21
BEST3-212ENST00000553096 UGT1A10Q9HAW8 530 aa7.48□□□□□ -1.21
BEST3-212ENST00000553096 UGT1A8Q9HAW9 530 aa7.48□□□□□ -1.21
BEST3-212ENST00000553096 MRPL40Q9NQ50 206 aaKnown RBP7.48□□□□□ -1.21
BEST3-212ENST00000553096 XPNPEP3Q9NQH7 507 aa7.48□□□□□ -1.21
BEST3-212ENST00000553096 TXNDC16Q9P2K2 825 aa7.48□□□□□ -1.21
BEST3-212ENST00000553096 COPG2Q9UBF2 871 aa7.48□□□□□ -1.21
BEST3-212ENST00000553096 DKK3Q9UBP4 350 aa7.48□□□□□ -1.21
BEST3-212ENST00000553096 SFMBT1Q9UHJ3 866 aa7.48□□□□□ -1.21
BEST3-212ENST00000553096 EMCNQ9ULC0 261 aa7.48□□□□□ -1.21
BEST3-212ENST00000553096 PTPRDP23468 1912 aa7.47□□□□□ -1.21
BEST3-212ENST00000553096 GOLGA8QA0A0J9YX86 632 aa7.47□□□□□ -1.21
BEST3-212ENST00000553096 MBLAC1A4D2B0 266 aaPredicted RBP7.47□□□□□ -1.21
BEST3-212ENST00000553096 GOLGA8OA6NCC3 632 aa7.47□□□□□ -1.21
BEST3-212ENST00000553096 GOLGA8NF8WBI6 632 aa7.47□□□□□ -1.21
BEST3-212ENST00000553096 IGHA2P01877 340 aa7.47□□□□□ -1.21
BEST3-212ENST00000553096 SPATA31D3P0C874 917 aa7.47□□□□□ -1.21
BEST3-212ENST00000553096 NR2C2P49116 596 aa7.47□□□□□ -1.21
BEST3-212ENST00000553096 NIPAL4Q0D2K0 466 aa7.47□□□□□ -1.21
BEST3-212ENST00000553096 APOFQ13790 326 aa7.47□□□□□ -1.21
BEST3-212ENST00000553096 TOMM20Q15388 145 aa7.47□□□□□ -1.21
BEST3-212ENST00000553096 PKDCCQ504Y2 493 aa7.47□□□□□ -1.21
BEST3-212ENST00000553096 GLRA4Q5JXX5 417 aa7.47□□□□□ -1.21
BEST3-212ENST00000553096 IQSEC1Q6DN90 963 aa7.47□□□□□ -1.21
BEST3-212ENST00000553096 TRMT10BQ6PF06 316 aaKnown RBP7.47□□□□□ -1.21
BEST3-212ENST00000553096 EPGNQ6UW88 154 aa7.47□□□□□ -1.21
BEST3-212ENST00000553096 BNC2Q6ZN30 1099 aaPredicted RBP7.47□□□□□ -1.21
BEST3-212ENST00000553096 SPATA31D4Q6ZUB0 917 aa7.47□□□□□ -1.21
BEST3-212ENST00000553096 KRT77Q7Z794 578 aa7.47□□□□□ -1.21
BEST3-212ENST00000553096 NUP93Q8N1F7 819 aa7.47□□□□□ -1.21
BEST3-212ENST00000553096 HIPK4Q8NE63 616 aa7.47□□□□□ -1.21
BEST3-212ENST00000553096 RP9Q8TA86 221 aaKnown RBP7.47□□□□□ -1.21
BEST3-212ENST00000553096 SGCDQ92629 289 aa7.47□□□□□ -1.21
BEST3-212ENST00000553096 NELL1Q92832 810 aa7.47□□□□□ -1.21
BEST3-212ENST00000553096 CNDP1Q96KN2 507 aa7.47□□□□□ -1.21
BEST3-212ENST00000553096 CDH19Q9H159 772 aa7.47□□□□□ -1.21
BEST3-212ENST00000553096 CYP3A43Q9HB55 503 aa7.47□□□□□ -1.21
BEST3-212ENST00000553096 NDFIP2Q9NV92 336 aa7.47□□□□□ -1.21
BEST3-212ENST00000553096 ATAD3AQ9NVI7 634 aa7.47□□□□□ -1.21
BEST3-212ENST00000553096 HACD3Q9P035 362 aa7.47□□□□□ -1.21
BEST3-212ENST00000553096 HSFX1Q9UBD0 423 aa7.47□□□□□ -1.21
BEST3-212ENST00000553096 TSPAN16Q9UKR8 245 aa7.47□□□□□ -1.21
BEST3-212ENST00000553096 PATJQ8NI35 1801 aa7.47□□□□□ -1.21
BEST3-212ENST00000553096 FRMPD3Q5JV73 1810 aa7.47□□□□□ -1.21
BEST3-212ENST00000553096 C2CD4BA6NLJ0 364 aa7.47□□□□□ -1.21
BEST3-212ENST00000553096 ZNF195O14628 629 aa7.47□□□□□ -1.21
BEST3-212ENST00000553096 TPP1O14773 563 aa7.47□□□□□ -1.21
BEST3-212ENST00000553096 DYNC1LI2O43237 492 aaPredicted RBP7.47□□□□□ -1.21
BEST3-212ENST00000553096 DCXO43602 365 aa7.47□□□□□ -1.21
BEST3-212ENST00000553096 MGEA5O60502 916 aa7.47□□□□□ -1.21
BEST3-212ENST00000553096 KCNJ13O60928 360 aa7.47□□□□□ -1.21
BEST3-212ENST00000553096 FBXO21O94952 628 aa7.47□□□□□ -1.21
BEST3-212ENST00000553096 HSPA4LO95757 839 aa7.47□□□□□ -1.21
BEST3-212ENST00000553096 PCNAP12004 261 aa7.47□□□□□ -1.21
BEST3-212ENST00000553096 P4HA1P13674 534 aa7.47□□□□□ -1.21
BEST3-212ENST00000553096 PDGFRAP16234 1089 aa7.47□□□□□ -1.21
BEST3-212ENST00000553096 PGAM1P18669 254 aa7.47□□□□□ -1.21
BEST3-212ENST00000553096 POLD2P49005 469 aa7.47□□□□□ -1.21
BEST3-212ENST00000553096 NUMBP49757 651 aa7.47□□□□□ -1.21
BEST3-212ENST00000553096 LBX1P52954 281 aa7.47□□□□□ -1.21
BEST3-212ENST00000553096 PRKAA2P54646 552 aa7.47□□□□□ -1.21
BEST3-212ENST00000553096 NRLP54845 237 aa7.47□□□□□ -1.21
BEST3-212ENST00000553096 ADARP55265 1226 aaKnown RBP7.47□□□□□ -1.21
BEST3-212ENST00000553096 GSTM4Q03013 218 aa7.47□□□□□ -1.21
BEST3-212ENST00000553096 PDE1CQ14123 709 aaPredicted RBP7.47□□□□□ -1.21
BEST3-212ENST00000553096 FLOT2Q14254 428 aa7.47□□□□□ -1.21
BEST3-212ENST00000553096 HERC3Q15034 1050 aa7.47□□□□□ -1.21
BEST3-212ENST00000553096 SYCP2LQ5T4T6 812 aa7.47□□□□□ -1.21
BEST3-212ENST00000553096 PPP1R26Q5T8A7 1209 aaPredicted RBP7.47□□□□□ -1.21
BEST3-212ENST00000553096 ZNF534Q76KX8 674 aa7.47□□□□□ -1.21
BEST3-212ENST00000553096 DPH6Q7L8W6 267 aa7.47□□□□□ -1.21
BEST3-212ENST00000553096 MAVSQ7Z434 540 aa7.47□□□□□ -1.21
BEST3-212ENST00000553096 RSPH3Q86UC2 560 aa7.47□□□□□ -1.21
BEST3-212ENST00000553096 C10orf107Q8IVU9 208 aa7.47□□□□□ -1.21
BEST3-212ENST00000553096 SIX5Q8N196 739 aa7.47□□□□□ -1.21
BEST3-212ENST00000553096 KYQ8NBH2 561 aa7.47□□□□□ -1.21
BEST3-212ENST00000553096 VPS50Q96JG6 964 aa7.47□□□□□ -1.21
BEST3-212ENST00000553096 HEXIM2Q96MH2 286 aaKnown RBP7.47□□□□□ -1.21
BEST3-212ENST00000553096 CCT7Q99832 543 aa7.47□□□□□ -1.21
BEST3-212ENST00000553096 FERMT1Q9BQL6 677 aa7.47□□□□□ -1.21
BEST3-212ENST00000553096 TRIM56Q9BRZ2 755 aaKnown RBP7.47□□□□□ -1.21
BEST3-212ENST00000553096 DPEP3Q9H4B8 488 aa7.47□□□□□ -1.21
BEST3-212ENST00000553096 EIF2B3Q9NR50 452 aaKnown RBP7.47□□□□□ -1.21
BEST3-212ENST00000553096 TBCCD1Q9NVR7 557 aa7.47□□□□□ -1.21
BEST3-212ENST00000553096 PNPOQ9NVS9 261 aa7.47□□□□□ -1.21
BEST3-212ENST00000553096 GINS2Q9Y248 185 aa7.47□□□□□ -1.21
BEST3-212ENST00000553096 ARIH1Q9Y4X5 557 aaPredicted RBP7.47□□□□□ -1.21
BEST3-212ENST00000553096 HEY1Q9Y5J3 304 aa7.47□□□□□ -1.21
BEST3-212ENST00000553096 AK5Q9Y6K8 562 aa7.47□□□□□ -1.21
BEST3-212ENST00000553096 SQORQ9Y6N5 450 aa7.47□□□□□ -1.21
BEST3-212ENST00000553096 NLRC5Q86WI3 1866 aa7.47□□□□□ -1.21
BEST3-212ENST00000553096 RGSL1A5PLK6 1076 aa7.46□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms