RNA–Protein interactions for RNA: ENST00000552645.5

LETMD1-234, Transcript of LETM1 domain containing 1, humanhuman

TSL 1 (best)

Gene LETMD1, Length 1,623 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-234ENST00000552645 HMGB1P1B2RPK0 211 aaPredicted RBP10.17□□□□□ -0.78
LETMD1-234ENST00000552645 CHURC1-FNTBB4DL54 471 aa10.17□□□□□ -0.78
LETMD1-234ENST00000552645 H3BRJ5 948 aa10.17□□□□□ -0.78
LETMD1-234ENST00000552645 FGF10O15520 208 aaPredicted RBP10.17□□□□□ -0.78
LETMD1-234ENST00000552645 SYNCRIPO60506 623 aaKnown RBP10.17□□□□□ -0.78
LETMD1-234ENST00000552645 SNAP91O60641 907 aa10.17□□□□□ -0.78
LETMD1-234ENST00000552645 EPHX1P07099 455 aa10.17□□□□□ -0.78
LETMD1-234ENST00000552645 KRT7P08729 469 aa10.17□□□□□ -0.78
LETMD1-234ENST00000552645 HLA-EP13747 358 aa10.17□□□□□ -0.78
LETMD1-234ENST00000552645 PRKCHP24723 683 aa10.17□□□□□ -0.78
LETMD1-234ENST00000552645 MAN1A1P33908 653 aa10.17□□□□□ -0.78
LETMD1-234ENST00000552645 IL12RB1P42701 662 aa10.17□□□□□ -0.78
LETMD1-234ENST00000552645 STK19P49842 368 aaPredicted RBP10.17□□□□□ -0.78
LETMD1-234ENST00000552645 ECT2LQ008S8 904 aa10.17□□□□□ -0.78
LETMD1-234ENST00000552645 GNA12Q03113 381 aa10.17□□□□□ -0.78
LETMD1-234ENST00000552645 SEMA3BQ13214 749 aa10.17□□□□□ -0.78
LETMD1-234ENST00000552645 SLC12A1Q13621 1099 aa10.17□□□□□ -0.78
LETMD1-234ENST00000552645 SKIDA1Q1XH10 827 aa10.17□□□□□ -0.78
LETMD1-234ENST00000552645 ACCSLQ4AC99 568 aa10.17□□□□□ -0.78
LETMD1-234ENST00000552645 GLE1Q53GS7 698 aaKnown RBP10.17□□□□□ -0.78
LETMD1-234ENST00000552645 ARTNQ5T4W7 220 aa10.17□□□□□ -0.78
LETMD1-234ENST00000552645 RNF187Q5TA31 235 aaPredicted RBP10.17□□□□□ -0.78
LETMD1-234ENST00000552645 ANO7Q6IWH7 933 aa10.17□□□□□ -0.78
LETMD1-234ENST00000552645 TMEM92Q6UXU6 159 aa10.17□□□□□ -0.78
LETMD1-234ENST00000552645 LINGO4Q6UY18 593 aa10.17□□□□□ -0.78
LETMD1-234ENST00000552645 RFX8Q6ZV50 586 aa10.17□□□□□ -0.78
LETMD1-234ENST00000552645 SYT13Q7L8C5 426 aa10.17□□□□□ -0.78
LETMD1-234ENST00000552645 KIAA0907Q7Z7F0 614 aaPredicted RBP10.17□□□□□ -0.78
LETMD1-234ENST00000552645 CACUL1Q86Y37 369 aa10.17□□□□□ -0.78
LETMD1-234ENST00000552645 PSTKQ8IV42 348 aaKnown RBP10.17□□□□□ -0.78
LETMD1-234ENST00000552645 GSPT2Q8IYD1 628 aaKnown RBP10.17□□□□□ -0.78
LETMD1-234ENST00000552645 NETO2Q8NC67 525 aa10.17□□□□□ -0.78
LETMD1-234ENST00000552645 TSTD1Q8NFU3 115 aa10.17□□□□□ -0.78
LETMD1-234ENST00000552645 KCNV2Q8TDN2 545 aa10.17□□□□□ -0.78
LETMD1-234ENST00000552645 TEKT4Q8WW24 435 aa10.17□□□□□ -0.78
LETMD1-234ENST00000552645 HMGB4Q8WW32 186 aa10.17□□□□□ -0.78
LETMD1-234ENST00000552645 CCT8L2Q96SF2 557 aa10.17□□□□□ -0.78
LETMD1-234ENST00000552645 ATP13A1Q9HD20 1204 aa10.17□□□□□ -0.78
LETMD1-234ENST00000552645 TMEM248Q9NWD8 314 aa10.17□□□□□ -0.78
LETMD1-234ENST00000552645 THAP10Q9P2Z0 257 aaPredicted RBP10.17□□□□□ -0.78
LETMD1-234ENST00000552645 NEU3Q9UQ49 428 aa10.17□□□□□ -0.78
LETMD1-234ENST00000552645 ERVW-1Q9UQF0 538 aa10.17□□□□□ -0.78
LETMD1-234ENST00000552645 MUC6Q6W4X9 2439 aa10.16□□□□□ -0.78
LETMD1-234ENST00000552645 CKAP5Q14008 2032 aa10.16□□□□□ -0.78
LETMD1-234ENST00000552645 MUC22E2RYF6 1773 aaPredicted RBP10.16□□□□□ -0.78
LETMD1-234ENST00000552645 CHD5Q8TDI0 1954 aa10.16□□□□□ -0.78
LETMD1-234ENST00000552645 TCRBV21S2A2A0A5A6 115 aa10.16□□□□□ -0.78
LETMD1-234ENST00000552645 ILVBLA1L0T0 632 aa10.16□□□□□ -0.78
LETMD1-234ENST00000552645 LRRD1A4D1F6 860 aa10.16□□□□□ -0.78
LETMD1-234ENST00000552645 ZBTB24O43167 697 aaPredicted RBP10.16□□□□□ -0.78
LETMD1-234ENST00000552645 KRT86O43790 486 aa10.16□□□□□ -0.78
LETMD1-234ENST00000552645 BNIP3LO60238 219 aa10.16□□□□□ -0.78
LETMD1-234ENST00000552645 RAMP2O60895 175 aa10.16□□□□□ -0.78
LETMD1-234ENST00000552645 SNUPNO95149 360 aaKnown RBP10.16□□□□□ -0.78
LETMD1-234ENST00000552645 CD48P09326 243 aa10.16□□□□□ -0.78
LETMD1-234ENST00000552645 NEFHP12036 1026 aa10.16□□□□□ -0.78
LETMD1-234ENST00000552645 HNRNPLP14866 589 aaKnown RBP eCLIP10.16□□□□□ -0.78
LETMD1-234ENST00000552645 NR1D1P20393 614 aa10.16□□□□□ -0.78
LETMD1-234ENST00000552645 GLDCP23378 1020 aa10.16□□□□□ -0.78
LETMD1-234ENST00000552645 GCKP35557 465 aa10.16□□□□□ -0.78
LETMD1-234ENST00000552645 ACVRL1P37023 503 aa10.16□□□□□ -0.78
LETMD1-234ENST00000552645 NNMTP40261 264 aa10.16□□□□□ -0.78
LETMD1-234ENST00000552645 MDH1P40925 334 aaKnown RBP10.16□□□□□ -0.78
LETMD1-234ENST00000552645 MAPKAPK2P49137 400 aa10.16□□□□□ -0.78
LETMD1-234ENST00000552645 DGKEP52429 567 aa10.16□□□□□ -0.78
LETMD1-234ENST00000552645 MMRN1Q13201 1228 aa10.16□□□□□ -0.78
LETMD1-234ENST00000552645 RIPK1Q13546 671 aa10.16□□□□□ -0.78
LETMD1-234ENST00000552645 STARD3Q14849 445 aa10.16□□□□□ -0.78
LETMD1-234ENST00000552645 POLD3Q15054 466 aaPredicted RBP10.16□□□□□ -0.78
LETMD1-234ENST00000552645 E2F5Q15329 346 aa10.16□□□□□ -0.78
LETMD1-234ENST00000552645 PDCD2Q16342 344 aaPredicted RBP10.16□□□□□ -0.78
LETMD1-234ENST00000552645 CRY1Q16526 586 aa10.16□□□□□ -0.78
LETMD1-234ENST00000552645 DPYSL2Q16555 572 aa10.16□□□□□ -0.78
LETMD1-234ENST00000552645 PTPRNQ16849 979 aa10.16□□□□□ -0.78
LETMD1-234ENST00000552645 HSF5Q4G112 596 aaPredicted RBP10.16□□□□□ -0.78
LETMD1-234ENST00000552645 ANKRD20A8PQ5CZ79 823 aa10.16□□□□□ -0.78
LETMD1-234ENST00000552645 TTC19Q6DKK2 380 aaPredicted RBP10.16□□□□□ -0.78
LETMD1-234ENST00000552645 KIAA1211LQ6NV74 962 aa10.16□□□□□ -0.78
LETMD1-234ENST00000552645 MAML2Q8IZL2 1156 aaPredicted RBP10.16□□□□□ -0.78
LETMD1-234ENST00000552645 RTL3Q8N8U3 475 aaKnown RBP10.16□□□□□ -0.78
LETMD1-234ENST00000552645 PRSS33Q8NF86 280 aa10.16□□□□□ -0.78
LETMD1-234ENST00000552645 TPCN2Q8NHX9 752 aa10.16□□□□□ -0.78
LETMD1-234ENST00000552645 TTC17Q96AE7 1141 aa10.16□□□□□ -0.78
LETMD1-234ENST00000552645 ARL8AQ96BM9 186 aa10.16□□□□□ -0.78
LETMD1-234ENST00000552645 CELF6Q96J87 481 aaKnown RBP10.16□□□□□ -0.78
LETMD1-234ENST00000552645 C2orf49Q9BVC5 232 aaPredicted RBP10.16□□□□□ -0.78
LETMD1-234ENST00000552645 MTG2Q9H4K7 406 aa10.16□□□□□ -0.78
LETMD1-234ENST00000552645 PCDH18Q9HCL0 1135 aa10.16□□□□□ -0.78
LETMD1-234ENST00000552645 ZNF212Q9UDV6 495 aa10.16□□□□□ -0.78
LETMD1-234ENST00000552645 VPS51Q9UID3 782 aa10.16□□□□□ -0.78
LETMD1-234ENST00000552645 SLCO3A1Q9UIG8 710 aa10.16□□□□□ -0.78
LETMD1-234ENST00000552645 SLC25A13Q9UJS0 675 aa10.16□□□□□ -0.78
LETMD1-234ENST00000552645 GUCA1BQ9UMX6 200 aa10.16□□□□□ -0.78
LETMD1-234ENST00000552645 ALG6Q9Y672 507 aa10.16□□□□□ -0.78
LETMD1-234ENST00000552645 NYNRINQ9P2P1 1898 aaKnown RBP10.16□□□□□ -0.78
LETMD1-234ENST00000552645 EML5Q05BV3 1969 aa10.16□□□□□ -0.78
LETMD1-234ENST00000552645 VPS13AQ96RL7 3174 aa10.16□□□□□ -0.78
LETMD1-234ENST00000552645 NPC1O15118 1278 aa10.15□□□□□ -0.78
LETMD1-234ENST00000552645 KRT1P04264 644 aa10.15□□□□□ -0.78
LETMD1-234ENST00000552645 ASLP04424 464 aa10.15□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms