RNA–Protein interactions for RNA: ENST00000552590.6

PRIM1-208, Transcript of DNA primase subunit 1, humanhuman

TSL 5

Gene PRIM1, Length 1,459 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRIM1-208ENST00000552590 NCKAP1LP55160 1127 aa8.57□□□□□ -1.04
PRIM1-208ENST00000552590 ZFP36L1Q07352 338 aaKnown RBP8.57□□□□□ -1.04
PRIM1-208ENST00000552590 FZD2Q14332 565 aa8.57□□□□□ -1.04
PRIM1-208ENST00000552590 Q6ZSR6 202 aa8.57□□□□□ -1.04
PRIM1-208ENST00000552590 C8orf86Q6ZUL3 223 aa8.57□□□□□ -1.04
PRIM1-208ENST00000552590 DPH6Q7L8W6 267 aa8.57□□□□□ -1.04
PRIM1-208ENST00000552590 KIAA0907Q7Z7F0 614 aaPredicted RBP8.57□□□□□ -1.04
PRIM1-208ENST00000552590 NT5DC4Q86YG4 428 aa8.57□□□□□ -1.04
PRIM1-208ENST00000552590 DENND1CQ8IV53 801 aa8.57□□□□□ -1.04
PRIM1-208ENST00000552590 UNC5BQ8IZJ1 945 aa8.57□□□□□ -1.04
PRIM1-208ENST00000552590 AHI1Q8N157 1196 aa8.57□□□□□ -1.04
PRIM1-208ENST00000552590 STK40Q8N2I9 435 aa8.57□□□□□ -1.04
PRIM1-208ENST00000552590 SPATA3Q8NHX4 192 aa8.57□□□□□ -1.04
PRIM1-208ENST00000552590 TMEM159Q96B96 161 aa8.57□□□□□ -1.04
PRIM1-208ENST00000552590 MRPL45Q9BRJ2 306 aaKnown RBP8.57□□□□□ -1.04
PRIM1-208ENST00000552590 SEMA6CQ9H3T2 930 aa8.57□□□□□ -1.04
PRIM1-208ENST00000552590 NMUR1Q9HB89 426 aa8.57□□□□□ -1.04
PRIM1-208ENST00000552590 LUZP4Q9P127 313 aa8.57□□□□□ -1.04
PRIM1-208ENST00000552590 KCNG1Q9UIX4 513 aa8.57□□□□□ -1.04
PRIM1-208ENST00000552590 TLK1Q9UKI8 766 aa8.57□□□□□ -1.04
PRIM1-208ENST00000552590 AGO2Q9UKV8 859 aaKnown RBP8.57□□□□□ -1.04
PRIM1-208ENST00000552590 DNM3Q9UQ16 869 aa8.57□□□□□ -1.04
PRIM1-208ENST00000552590 MXRA5Q9NR99 2828 aa8.56□□□□□ -1.04
PRIM1-208ENST00000552590 VWA3AA6NCI4 1184 aa8.56□□□□□ -1.04
PRIM1-208ENST00000552590 ADARB2-AS1A8MUL3 147 aa8.56□□□□□ -1.04
PRIM1-208ENST00000552590 TTC34A8MYJ7 566 aa8.56□□□□□ -1.04
PRIM1-208ENST00000552590 PLRG1O43660 514 aaKnown RBP8.56□□□□□ -1.04
PRIM1-208ENST00000552590 GCATO75600 419 aa8.56□□□□□ -1.04
PRIM1-208ENST00000552590 IL18RAPO95256 599 aa8.56□□□□□ -1.04
PRIM1-208ENST00000552590 SNRPB2P08579 225 aaKnown RBP8.56□□□□□ -1.04
PRIM1-208ENST00000552590 FAM157BP0CG42 384 aa8.56□□□□□ -1.04
PRIM1-208ENST00000552590 CD99P14209 185 aa8.56□□□□□ -1.04
PRIM1-208ENST00000552590 CD70P32970 193 aa8.56□□□□□ -1.04
PRIM1-208ENST00000552590 ST8SIA6P61647 398 aa8.56□□□□□ -1.04
PRIM1-208ENST00000552590 RBP5P82980 135 aa8.56□□□□□ -1.04
PRIM1-208ENST00000552590 C1orf61Q13536 156 aa8.56□□□□□ -1.04
PRIM1-208ENST00000552590 GNL2Q13823 731 aaKnown RBP8.56□□□□□ -1.04
PRIM1-208ENST00000552590 C16orf72Q14CZ0 275 aa8.56□□□□□ -1.04
PRIM1-208ENST00000552590 ZRANB3Q5FWF4 1079 aa8.56□□□□□ -1.04
PRIM1-208ENST00000552590 CEP135Q66GS9 1140 aa8.56□□□□□ -1.04
PRIM1-208ENST00000552590 GCNT7Q6ZNI0 430 aa8.56□□□□□ -1.04
PRIM1-208ENST00000552590 PTAR1Q7Z6K3 402 aaPredicted RBP8.56□□□□□ -1.04
PRIM1-208ENST00000552590 SYT9Q86SS6 491 aa8.56□□□□□ -1.04
PRIM1-208ENST00000552590 B3GNT4Q9C0J1 378 aa8.56□□□□□ -1.04
PRIM1-208ENST00000552590 SNX25Q9H3E2 840 aa8.56□□□□□ -1.04
PRIM1-208ENST00000552590 LRRN3Q9H3W5 708 aa8.56□□□□□ -1.04
PRIM1-208ENST00000552590 GPN2Q9H9Y4 310 aaPredicted RBP8.56□□□□□ -1.04
PRIM1-208ENST00000552590 CYP4F12Q9HCS2 524 aa8.56□□□□□ -1.04
PRIM1-208ENST00000552590 ZDHHC3Q9NYG2 299 aa8.56□□□□□ -1.04
PRIM1-208ENST00000552590 GULP1Q9UBP9 304 aa8.56□□□□□ -1.04
PRIM1-208ENST00000552590 ITGA11Q9UKX5 1188 aa8.56□□□□□ -1.04
PRIM1-208ENST00000552590 TRPM6Q9BX84 2022 aa8.55□□□□□ -1.04
PRIM1-208ENST00000552590 NPHP3-ACAD11A0A0J9YXS1 232 aa8.55□□□□□ -1.04
PRIM1-208ENST00000552590 A0A1W2PNR3 127 aa8.55□□□□□ -1.04
PRIM1-208ENST00000552590 A0A1W2PQH9 124 aa8.55□□□□□ -1.04
PRIM1-208ENST00000552590 RAD1O60671 282 aa8.55□□□□□ -1.04
PRIM1-208ENST00000552590 CBX6O95503 412 aa8.55□□□□□ -1.04
PRIM1-208ENST00000552590 COPB1P53618 953 aaKnown RBP8.55□□□□□ -1.04
PRIM1-208ENST00000552590 ADKP55263 362 aaKnown RBP8.55□□□□□ -1.04
PRIM1-208ENST00000552590 KRTAP10-9P60411 292 aa8.55□□□□□ -1.04
PRIM1-208ENST00000552590 KRT32Q14532 448 aa8.55□□□□□ -1.04
PRIM1-208ENST00000552590 ARSJQ5FYB0 599 aaPredicted RBP8.55□□□□□ -1.04
PRIM1-208ENST00000552590 PHF19Q5T6S3 580 aa8.55□□□□□ -1.04
PRIM1-208ENST00000552590 KLHDC10Q6PID8 442 aa8.55□□□□□ -1.04
PRIM1-208ENST00000552590 TAOK1Q7L7X3 1001 aa8.55□□□□□ -1.04
PRIM1-208ENST00000552590 KCNK18Q7Z418 384 aa8.55□□□□□ -1.04
PRIM1-208ENST00000552590 CDH24Q86UP0 819 aa8.55□□□□□ -1.04
PRIM1-208ENST00000552590 CPXM2Q8N436 756 aa8.55□□□□□ -1.04
PRIM1-208ENST00000552590 DDX51Q8N8A6 666 aaKnown RBP eCLIP8.55□□□□□ -1.04
PRIM1-208ENST00000552590 GLIS1Q8NBF1 620 aa8.55□□□□□ -1.04
PRIM1-208ENST00000552590 WFDC5Q8TCV5 224 aa8.55□□□□□ -1.04
PRIM1-208ENST00000552590 CACTINQ8WUQ7 758 aaKnown RBP8.55□□□□□ -1.04
PRIM1-208ENST00000552590 C19orf60Q96EN9 201 aa8.55□□□□□ -1.04
PRIM1-208ENST00000552590 HPDLQ96IR7 371 aa8.55□□□□□ -1.04
PRIM1-208ENST00000552590 MRGPRX3Q96LB0 322 aa8.55□□□□□ -1.04
PRIM1-208ENST00000552590 KRTAP4-11Q9BYQ6 195 aa8.55□□□□□ -1.04
PRIM1-208ENST00000552590 AGXT2Q9BYV1 514 aa8.55□□□□□ -1.04
PRIM1-208ENST00000552590 DCLK3Q9C098 648 aa8.55□□□□□ -1.04
PRIM1-208ENST00000552590 IKZF4Q9H2S9 585 aa8.55□□□□□ -1.04
PRIM1-208ENST00000552590 TCEAL2Q9H3H9 227 aaPredicted RBP8.55□□□□□ -1.04
PRIM1-208ENST00000552590 RWDD1Q9H446 243 aaPredicted RBP8.55□□□□□ -1.04
PRIM1-208ENST00000552590 DMAP1Q9NPF5 467 aaPredicted RBP8.55□□□□□ -1.04
PRIM1-208ENST00000552590 MTPAPQ9NVV4 582 aaKnown RBP eCLIP8.55□□□□□ -1.04
PRIM1-208ENST00000552590 COMMD8Q9NX08 183 aa8.55□□□□□ -1.04
PRIM1-208ENST00000552590 KCTD3Q9Y597 815 aa8.55□□□□□ -1.04
PRIM1-208ENST00000552590 RNF215Q9Y6U7 377 aa8.55□□□□□ -1.04
PRIM1-208ENST00000552590 NYNRINQ9P2P1 1898 aaKnown RBP8.55□□□□□ -1.04
PRIM1-208ENST00000552590 MYO7BQ6PIF6 2116 aa8.54□□□□□ -1.04
PRIM1-208ENST00000552590 LOC101059948A0A1B0GTJ6 334 aa8.54□□□□□ -1.04
PRIM1-208ENST00000552590 A6NJY4 79 aa8.54□□□□□ -1.04
PRIM1-208ENST00000552590 KIAA1324LA8MWY0 1029 aaPredicted RBP8.54□□□□□ -1.04
PRIM1-208ENST00000552590 H0YCG3 227 aa8.54□□□□□ -1.04
PRIM1-208ENST00000552590 KRT86O43790 486 aa8.54□□□□□ -1.04
PRIM1-208ENST00000552590 PRICKLE3O43900 615 aaPredicted RBP8.54□□□□□ -1.04
PRIM1-208ENST00000552590 BEST1O76090 585 aa8.54□□□□□ -1.04
PRIM1-208ENST00000552590 ALBP02768 609 aa8.54□□□□□ -1.04
PRIM1-208ENST00000552590 XBP1P17861 261 aa8.54□□□□□ -1.04
PRIM1-208ENST00000552590 TCN2P20062 427 aa8.54□□□□□ -1.04
PRIM1-208ENST00000552590 MZF1P28698 734 aaPredicted RBP8.54□□□□□ -1.04
PRIM1-208ENST00000552590 AKT2P31751 481 aa8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms