RNA–Protein interactions for RNA: ENST00000550325.5

VDR-208, Transcript of vitamin D receptor, humanhuman

TSL 1 (best) BASIC

Gene VDR, Length 3,925 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VDR-208ENST00000550325 H0YCG3 227 aa12.3□□□□□ -0.44
VDR-208ENST00000550325 KPNA4O00629 521 aaPredicted RBP12.3□□□□□ -0.44
VDR-208ENST00000550325 HSPA8P11142 646 aaKnown RBP12.3□□□□□ -0.44
VDR-208ENST00000550325 PSMB4P28070 264 aa12.3□□□□□ -0.44
VDR-208ENST00000550325 GNL1P36915 607 aaPredicted RBP12.3□□□□□ -0.44
VDR-208ENST00000550325 CASP2P42575 452 aa12.3□□□□□ -0.44
VDR-208ENST00000550325 TGFB2P61812 414 aa12.3□□□□□ -0.44
VDR-208ENST00000550325 RHDQ02161 417 aa12.3□□□□□ -0.44
VDR-208ENST00000550325 FASTKQ14296 549 aaKnown RBP12.3□□□□□ -0.44
VDR-208ENST00000550325 USP10Q14694 798 aaKnown RBP12.3□□□□□ -0.44
VDR-208ENST00000550325 PID1Q7Z2X4 250 aa12.3□□□□□ -0.44
VDR-208ENST00000550325 OR52K1Q8NGK4 314 aa12.3□□□□□ -0.44
VDR-208ENST00000550325 TRPC4APQ8TEL6 797 aa12.3□□□□□ -0.44
VDR-208ENST00000550325 ZDHHC15Q96MV8 337 aa12.3□□□□□ -0.44
VDR-208ENST00000550325 TCF12Q99081 682 aa12.3□□□□□ -0.44
VDR-208ENST00000550325 ZBTB26Q9HCK0 441 aa12.3□□□□□ -0.44
VDR-208ENST00000550325 POLE4Q9NR33 117 aa12.3□□□□□ -0.44
VDR-208ENST00000550325 PKD2L2Q9NZM6 624 aa12.3□□□□□ -0.44
VDR-208ENST00000550325 A6NL46 340 aa12.29□□□□□ -0.44
VDR-208ENST00000550325 C9IYK1 514 aa12.29□□□□□ -0.44
VDR-208ENST00000550325 MRASO14807 208 aa12.29□□□□□ -0.44
VDR-208ENST00000550325 SRP72O76094 671 aaKnown RBP12.29□□□□□ -0.44
VDR-208ENST00000550325 PSAPP07602 524 aa12.29□□□□□ -0.44
VDR-208ENST00000550325 CLCN2P51788 898 aa12.29□□□□□ -0.44
VDR-208ENST00000550325 ZNF143P52747 638 aaPredicted RBP12.29□□□□□ -0.44
VDR-208ENST00000550325 LSM3P62310 102 aaKnown RBP12.29□□□□□ -0.44
VDR-208ENST00000550325 IFRD2Q12894 506 aaPredicted RBP12.29□□□□□ -0.44
VDR-208ENST00000550325 ZNF460Q14592 562 aa12.29□□□□□ -0.44
VDR-208ENST00000550325 PDK2Q15119 407 aa12.29□□□□□ -0.44
VDR-208ENST00000550325 HMBOX1Q6NT76 420 aa12.29□□□□□ -0.44
VDR-208ENST00000550325 DHRS4L2Q6PKH6 230 aa12.29□□□□□ -0.44
VDR-208ENST00000550325 RNF19BQ6ZMZ0 732 aa12.29□□□□□ -0.44
VDR-208ENST00000550325 MCF2L2Q86YR7 1114 aa12.29□□□□□ -0.44
VDR-208ENST00000550325 SCUBE3Q8IX30 993 aa12.29□□□□□ -0.44
VDR-208ENST00000550325 MCUQ8NE86 351 aa12.29□□□□□ -0.44
VDR-208ENST00000550325 ACVR1CQ8NER5 493 aa12.29□□□□□ -0.44
VDR-208ENST00000550325 OR9I1Q8NGQ6 314 aa12.29□□□□□ -0.44
VDR-208ENST00000550325 KCTD4Q8WVF5 259 aa12.29□□□□□ -0.44
VDR-208ENST00000550325 TWNKQ96RR1 684 aa12.29□□□□□ -0.44
VDR-208ENST00000550325 PPP1R16BQ96T49 567 aa12.29□□□□□ -0.44
VDR-208ENST00000550325 CCDC90BQ9GZT6 254 aa12.29□□□□□ -0.44
VDR-208ENST00000550325 SIAEQ9HAT2 523 aa12.29□□□□□ -0.44
VDR-208ENST00000550325 TMX2Q9Y320 296 aa12.29□□□□□ -0.44
VDR-208ENST00000550325 BAIAP3O94812 1187 aa12.29□□□□□ -0.44
VDR-208ENST00000550325 PGAM1P18669 254 aa12.29□□□□□ -0.44
VDR-208ENST00000550325 PLK1P53350 603 aa12.29□□□□□ -0.44
VDR-208ENST00000550325 TPTEP56180 551 aa12.29□□□□□ -0.44
VDR-208ENST00000550325 MOGQ16653 247 aa12.29□□□□□ -0.44
VDR-208ENST00000550325 KIF19Q2TAC6 998 aa12.29□□□□□ -0.44
VDR-208ENST00000550325 FAM183BPQ6ZVS7 135 aa12.29□□□□□ -0.44
VDR-208ENST00000550325 BTLAQ7Z6A9 289 aa12.29□□□□□ -0.44
VDR-208ENST00000550325 IGFN1Q86VF2 1251 aa12.29□□□□□ -0.44
VDR-208ENST00000550325 TMEM174Q8WUU8 243 aa12.29□□□□□ -0.44
VDR-208ENST00000550325 ZNF341Q9BYN7 854 aa12.29□□□□□ -0.44
VDR-208ENST00000550325 ITGB1BP2Q9UKP3 347 aa12.29□□□□□ -0.44
VDR-208ENST00000550325 TCAF2A6NFQ2 919 aa12.29□□□□□ -0.44
VDR-208ENST00000550325 KCNK1O00180 336 aa12.29□□□□□ -0.44
VDR-208ENST00000550325 TSPAN8P19075 237 aa12.29□□□□□ -0.44
VDR-208ENST00000550325 TCEA1P23193 301 aaKnown RBP12.29□□□□□ -0.44
VDR-208ENST00000550325 LRPAP1P30533 357 aa12.29□□□□□ -0.44
VDR-208ENST00000550325 MERTKQ12866 999 aa12.29□□□□□ -0.44
VDR-208ENST00000550325 CCDC14Q49A88 953 aa12.29□□□□□ -0.44
VDR-208ENST00000550325 KIAA2013Q8IYS2 634 aa12.29□□□□□ -0.44
VDR-208ENST00000550325 SLX1AQ9BQ83 275 aa12.29□□□□□ -0.44
VDR-208ENST00000550325 SLC27A5Q9Y2P5 690 aa12.29□□□□□ -0.44
VDR-208ENST00000550325 G3V2L1 256 aa12.28□□□□□ -0.44
VDR-208ENST00000550325 MAN1A2O60476 641 aa12.28□□□□□ -0.44
VDR-208ENST00000550325 EDN1P05305 212 aa12.28□□□□□ -0.44
VDR-208ENST00000550325 MMP10P09238 476 aa12.28□□□□□ -0.44
VDR-208ENST00000550325 TGM2P21980 687 aa12.28□□□□□ -0.44
VDR-208ENST00000550325 PRKAA1Q13131 559 aa12.28□□□□□ -0.44
VDR-208ENST00000550325 KIZQ2M2Z5 673 aa12.28□□□□□ -0.44
VDR-208ENST00000550325 TREML2Q5T2D2 321 aa12.28□□□□□ -0.44
VDR-208ENST00000550325 PRR23BQ6ZRT6 265 aa12.28□□□□□ -0.44
VDR-208ENST00000550325 PIWIL3Q7Z3Z3 882 aaKnown RBP12.28□□□□□ -0.44
VDR-208ENST00000550325 CAMK1DQ8IU85 385 aa12.28□□□□□ -0.44
VDR-208ENST00000550325 Q8N9G6 341 aaPredicted RBP12.28□□□□□ -0.44
VDR-208ENST00000550325 ANKRD36BP1Q96IX9 119 aa12.28□□□□□ -0.44
VDR-208ENST00000550325 PRMT6Q96LA8 375 aaPredicted RBP12.28□□□□□ -0.44
VDR-208ENST00000550325 ANKRD60Q9BZ19 345 aa12.28□□□□□ -0.44
VDR-208ENST00000550325 NOL6Q9H6R4 1146 aaKnown RBP12.28□□□□□ -0.44
VDR-208ENST00000550325 UBP1Q9NZI7 540 aa12.28□□□□□ -0.44
VDR-208ENST00000550325 OAZ3Q9UMX2 235 aa12.28□□□□□ -0.44
VDR-208ENST00000550325 ANKRD12Q6UB98 2062 aa12.28□□□□□ -0.44
VDR-208ENST00000550325 IL10P22301 178 aa12.28□□□□□ -0.44
VDR-208ENST00000550325 PTPN11Q06124 597 aaPredicted RBP12.28□□□□□ -0.44
VDR-208ENST00000550325 NFATC3Q12968 1075 aa12.28□□□□□ -0.44
VDR-208ENST00000550325 STX5Q13190 355 aa12.28□□□□□ -0.44
VDR-208ENST00000550325 SNRNP48Q6IEG0 339 aaKnown RBP12.28□□□□□ -0.44
VDR-208ENST00000550325 FAM160B2Q86V87 743 aa12.28□□□□□ -0.44
VDR-208ENST00000550325 C1orf50Q9BV19 199 aa12.28□□□□□ -0.44
VDR-208ENST00000550325 SPAG4Q9NPE6 437 aa12.28□□□□□ -0.44
VDR-208ENST00000550325 DUS2Q9NX74 493 aaKnown RBP12.28□□□□□ -0.44
VDR-208ENST00000550325 POU2F3Q9UKI9 436 aa12.28□□□□□ -0.44
VDR-208ENST00000550325 TMEM98Q9Y2Y6 226 aa12.28□□□□□ -0.44
VDR-208ENST00000550325 BCLAF3A2AJT9 711 aaKnown RBP12.28□□□□□ -0.44
VDR-208ENST00000550325 PSMD11O00231 422 aa12.28□□□□□ -0.44
VDR-208ENST00000550325 EI24O14681 340 aa12.28□□□□□ -0.44
VDR-208ENST00000550325 GRID2O43424 1007 aa12.28□□□□□ -0.44
VDR-208ENST00000550325 REP15Q6BDI9 236 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms