RNA–Protein interactions for RNA: ENST00000547259.1

HDAC7-226, Transcript of histone deacetylase 7, humanhuman

TSL 3

Gene HDAC7, Length 569 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-226ENST00000547259 STIM2Q9P246 746 aa12.38□□□□□ -0.43
HDAC7-226ENST00000547259 RCOR3Q9P2K3 495 aaPredicted RBP12.38□□□□□ -0.43
HDAC7-226ENST00000547259 CABIN1Q9Y6J0 2220 aa12.38□□□□□ -0.43
HDAC7-226ENST00000547259 FAM221BA6H8Z2 402 aa12.37□□□□□ -0.43
HDAC7-226ENST00000547259 ESPNB1AK53 854 aa12.37□□□□□ -0.43
HDAC7-226ENST00000547259 FGF10O15520 208 aaPredicted RBP12.37□□□□□ -0.43
HDAC7-226ENST00000547259 CHRM1P11229 460 aaPredicted RBP12.37□□□□□ -0.43
HDAC7-226ENST00000547259 GABRG2P18507 467 aa12.37□□□□□ -0.43
HDAC7-226ENST00000547259 EPHB2P29323 1055 aa12.37□□□□□ -0.43
HDAC7-226ENST00000547259 IRAK1P51617 712 aa12.37□□□□□ -0.43
HDAC7-226ENST00000547259 SGSHP51688 502 aa12.37□□□□□ -0.43
HDAC7-226ENST00000547259 RPS24P62847 133 aaKnown RBP12.37□□□□□ -0.43
HDAC7-226ENST00000547259 MESP2Q0VG99 397 aa12.37□□□□□ -0.43
HDAC7-226ENST00000547259 MMRN1Q13201 1228 aa12.37□□□□□ -0.43
HDAC7-226ENST00000547259 ZNF211Q13398 564 aaPredicted RBP12.37□□□□□ -0.43
HDAC7-226ENST00000547259 STARD3Q14849 445 aa12.37□□□□□ -0.43
HDAC7-226ENST00000547259 TFDP3Q5H9I0 405 aa12.37□□□□□ -0.43
HDAC7-226ENST00000547259 DCAF12L1Q5VU92 463 aa12.37□□□□□ -0.43
HDAC7-226ENST00000547259 MFSD7Q6UXD7 560 aa12.37□□□□□ -0.43
HDAC7-226ENST00000547259 SPOCD1Q6ZMY3 1216 aa12.37□□□□□ -0.43
HDAC7-226ENST00000547259 METTL3Q86U44 580 aaKnown RBP12.37□□□□□ -0.43
HDAC7-226ENST00000547259 CIR1Q86X95 450 aaPredicted RBP12.37□□□□□ -0.43
HDAC7-226ENST00000547259 RFX6Q8HWS3 928 aa12.37□□□□□ -0.43
HDAC7-226ENST00000547259 ZNF683Q8IZ20 524 aa12.37□□□□□ -0.43
HDAC7-226ENST00000547259 CFAP52Q8N1V2 620 aa12.37□□□□□ -0.43
HDAC7-226ENST00000547259 TRAF3IP1Q8TDR0 691 aaPredicted RBP12.37□□□□□ -0.43
HDAC7-226ENST00000547259 UCMAQ8WVF2 138 aa12.37□□□□□ -0.43
HDAC7-226ENST00000547259 GATA6Q92908 595 aa12.37□□□□□ -0.43
HDAC7-226ENST00000547259 BHMTQ93088 406 aa12.37□□□□□ -0.43
HDAC7-226ENST00000547259 TMA16Q96EY4 203 aaKnown RBP12.37□□□□□ -0.43
HDAC7-226ENST00000547259 MYEOVQ96EZ4 313 aa12.37□□□□□ -0.43
HDAC7-226ENST00000547259 ZNF419Q96HQ0 510 aaPredicted RBP12.37□□□□□ -0.43
HDAC7-226ENST00000547259 CSPG4P5Q96PW8 444 aa12.37□□□□□ -0.43
HDAC7-226ENST00000547259 CARD9Q9H257 536 aa12.37□□□□□ -0.43
HDAC7-226ENST00000547259 CATSPERBQ9H7T0 1116 aa12.37□□□□□ -0.43
HDAC7-226ENST00000547259 CAPN10Q9HC96 672 aa12.37□□□□□ -0.43
HDAC7-226ENST00000547259 DNAAF2Q9NVR5 837 aaKnown RBP12.37□□□□□ -0.43
HDAC7-226ENST00000547259 MPP6Q9NZW5 540 aa12.37□□□□□ -0.43
HDAC7-226ENST00000547259 PPARGC1AQ9UBK2 798 aaKnown RBP12.37□□□□□ -0.43
HDAC7-226ENST00000547259 NEU3Q9UQ49 428 aa12.37□□□□□ -0.43
HDAC7-226ENST00000547259 PCDHB9Q9Y5E1 797 aa12.37□□□□□ -0.43
HDAC7-226ENST00000547259 KNTC1P50748 2209 aa12.36□□□□□ -0.43
HDAC7-226ENST00000547259 IGLV3-10A0A075B6K4 115 aa12.36□□□□□ -0.43
HDAC7-226ENST00000547259 hCG_1818297A0A087WSY0 165 aa12.36□□□□□ -0.43
HDAC7-226ENST00000547259 IGHV1OR15-9A0A0B4J2B8 117 aa12.36□□□□□ -0.43
HDAC7-226ENST00000547259 A0A1B0GVM2 712 aa12.36□□□□□ -0.43
HDAC7-226ENST00000547259 TCAF2A6NFQ2 919 aa12.36□□□□□ -0.43
HDAC7-226ENST00000547259 C3orf70A6NLC5 250 aaPredicted RBP12.36□□□□□ -0.43
HDAC7-226ENST00000547259 ZNF487B1APH4 448 aa12.36□□□□□ -0.43
HDAC7-226ENST00000547259 NEDD8-MDP1E9PL57 170 aa12.36□□□□□ -0.43
HDAC7-226ENST00000547259 TUBB4AP04350 444 aa12.36□□□□□ -0.43
HDAC7-226ENST00000547259 PYGMP11217 842 aa12.36□□□□□ -0.43
HDAC7-226ENST00000547259 TYRP14679 529 aa12.36□□□□□ -0.43
HDAC7-226ENST00000547259 CXCR5P32302 372 aa12.36□□□□□ -0.43
HDAC7-226ENST00000547259 CDKN2BP42772 138 aa12.36□□□□□ -0.43
HDAC7-226ENST00000547259 HCAR3P49019 387 aa12.36□□□□□ -0.43
HDAC7-226ENST00000547259 DGKGP49619 791 aa12.36□□□□□ -0.43
HDAC7-226ENST00000547259 COPS2P61201 443 aa12.36□□□□□ -0.43
HDAC7-226ENST00000547259 PPP2R5EQ16537 467 aa12.36□□□□□ -0.43
HDAC7-226ENST00000547259 C5orf22Q49AR2 442 aa12.36□□□□□ -0.43
HDAC7-226ENST00000547259 ANKRD20A8PQ5CZ79 823 aa12.36□□□□□ -0.43
HDAC7-226ENST00000547259 KAZNQ674X7 775 aa12.36□□□□□ -0.43
HDAC7-226ENST00000547259 AADACL2Q6P093 401 aa12.36□□□□□ -0.43
HDAC7-226ENST00000547259 CHST9Q7L1S5 443 aa12.36□□□□□ -0.43
HDAC7-226ENST00000547259 TFAP2DQ7Z6R9 452 aa12.36□□□□□ -0.43
HDAC7-226ENST00000547259 VSIG1Q86XK7 387 aa12.36□□□□□ -0.43
HDAC7-226ENST00000547259 CCDC117Q8IWD4 279 aaPredicted RBP12.36□□□□□ -0.43
HDAC7-226ENST00000547259 SFTPA1Q8IWL2 248 aa12.36□□□□□ -0.43
HDAC7-226ENST00000547259 RGL4Q8IZJ4 473 aa12.36□□□□□ -0.43
HDAC7-226ENST00000547259 CARNMT1Q8N4J0 409 aa12.36□□□□□ -0.43
HDAC7-226ENST00000547259 MINDY1Q8N5J2 469 aa12.36□□□□□ -0.43
HDAC7-226ENST00000547259 ZCCHC14Q8WYQ9 949 aaKnown RBP12.36□□□□□ -0.43
HDAC7-226ENST00000547259 TSC1Q92574 1164 aa12.36□□□□□ -0.43
HDAC7-226ENST00000547259 ZNF592Q92610 1267 aa12.36□□□□□ -0.43
HDAC7-226ENST00000547259 GABRG3Q99928 467 aa12.36□□□□□ -0.43
HDAC7-226ENST00000547259 TMEM121BQ9BXQ6 578 aaPredicted RBP12.36□□□□□ -0.43
HDAC7-226ENST00000547259 MAK16Q9BXY0 300 aaKnown RBP12.36□□□□□ -0.43
HDAC7-226ENST00000547259 PLK2Q9NYY3 685 aa12.36□□□□□ -0.43
HDAC7-226ENST00000547259 SNX12Q9UMY4 172 aa12.36□□□□□ -0.43
HDAC7-226ENST00000547259 NYNRINQ9P2P1 1898 aaKnown RBP12.36□□□□□ -0.43
HDAC7-226ENST00000547259 A0A1W2PQF6 199 aa12.35□□□□□ -0.43
HDAC7-226ENST00000547259 SRRM3A6NNA2 597 aaPredicted RBP12.35□□□□□ -0.43
HDAC7-226ENST00000547259 DRGXA6NNA5 263 aa12.35□□□□□ -0.43
HDAC7-226ENST00000547259 CEP104O60308 925 aa12.35□□□□□ -0.43
HDAC7-226ENST00000547259 CLDN11O75508 207 aa12.35□□□□□ -0.43
HDAC7-226ENST00000547259 CNTN5O94779 1100 aa12.35□□□□□ -0.43
HDAC7-226ENST00000547259 LUC7L3O95232 432 aaKnown RBP12.35□□□□□ -0.43
HDAC7-226ENST00000547259 RHOQP17081 205 aa12.35□□□□□ -0.43
HDAC7-226ENST00000547259 ERCC2P18074 760 aa12.35□□□□□ -0.43
HDAC7-226ENST00000547259 SPINK2P20155 84 aa12.35□□□□□ -0.43
HDAC7-226ENST00000547259 AMPD1P23109 780 aa12.35□□□□□ -0.43
HDAC7-226ENST00000547259 OXTRP30559 389 aa12.35□□□□□ -0.43
HDAC7-226ENST00000547259 PTPN7P35236 360 aa12.35□□□□□ -0.43
HDAC7-226ENST00000547259 CDH4P55283 916 aa12.35□□□□□ -0.43
HDAC7-226ENST00000547259 CDH18Q13634 790 aa12.35□□□□□ -0.43
HDAC7-226ENST00000547259 DPYSQ14117 519 aa12.35□□□□□ -0.43
HDAC7-226ENST00000547259 TFDP2Q14188 446 aa12.35□□□□□ -0.43
HDAC7-226ENST00000547259 LLGL1Q15334 1064 aa12.35□□□□□ -0.43
HDAC7-226ENST00000547259 PLEKHG6Q3KR16 790 aa12.35□□□□□ -0.43
HDAC7-226ENST00000547259 ALFQ53S48 1182 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms