RNA–Protein interactions for RNA: ENST00000546304.1

PRKDC-211, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 2

Gene PRKDC, Length 589 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-211ENST00000546304 ARL13BQ3SXY8 428 aa6.53□□□□□ -1.36
PRKDC-211ENST00000546304 MS4A13Q5J8X5 152 aa6.53□□□□□ -1.36
PRKDC-211ENST00000546304 LY6G5CQ5SRR4 150 aa6.53□□□□□ -1.36
PRKDC-211ENST00000546304 ADGRF1Q5T601 910 aa6.53□□□□□ -1.36
PRKDC-211ENST00000546304 RAP1GAP2Q684P5 730 aa6.53□□□□□ -1.36
PRKDC-211ENST00000546304 RFWD3Q6PCD5 774 aa6.53□□□□□ -1.36
PRKDC-211ENST00000546304 CYP4V2Q6ZWL3 525 aaPredicted RBP6.53□□□□□ -1.36
PRKDC-211ENST00000546304 CPNE8Q86YQ8 564 aa6.53□□□□□ -1.36
PRKDC-211ENST00000546304 UBALD2Q8IYN6 164 aa6.53□□□□□ -1.36
PRKDC-211ENST00000546304 ARFGAP1Q8N6T3 406 aa6.53□□□□□ -1.36
PRKDC-211ENST00000546304 HJURPQ8NCD3 748 aaPredicted RBP6.53□□□□□ -1.36
PRKDC-211ENST00000546304 ATRIPQ8WXE1 791 aa6.53□□□□□ -1.36
PRKDC-211ENST00000546304 AZIN2Q96A70 460 aa6.53□□□□□ -1.36
PRKDC-211ENST00000546304 MSANTD3Q96H12 275 aa6.53□□□□□ -1.36
PRKDC-211ENST00000546304 NCAPGQ9BPX3 1015 aa6.53□□□□□ -1.36
PRKDC-211ENST00000546304 DDX50Q9BQ39 737 aaKnown RBP6.53□□□□□ -1.36
PRKDC-211ENST00000546304 SNRNP25Q9BV90 132 aaKnown RBP6.53□□□□□ -1.36
PRKDC-211ENST00000546304 BBS2Q9BXC9 721 aa6.53□□□□□ -1.36
PRKDC-211ENST00000546304 LINC00597Q9H2U6 94 aa6.53□□□□□ -1.36
PRKDC-211ENST00000546304 GOLPH3Q9H4A6 298 aa6.53□□□□□ -1.36
PRKDC-211ENST00000546304 WDCPQ9H6R7 721 aa6.53□□□□□ -1.36
PRKDC-211ENST00000546304 ECT2Q9H8V3 914 aa6.53□□□□□ -1.36
PRKDC-211ENST00000546304 TRPV5Q9NQA5 729 aa6.53□□□□□ -1.36
PRKDC-211ENST00000546304 ANLNQ9NQW6 1124 aa6.53□□□□□ -1.36
PRKDC-211ENST00000546304 ARHGEF3Q9NR81 526 aa6.53□□□□□ -1.36
PRKDC-211ENST00000546304 SPHK2Q9NRA0 654 aa6.53□□□□□ -1.36
PRKDC-211ENST00000546304 GTSE1Q9NYZ3 720 aa6.53□□□□□ -1.36
PRKDC-211ENST00000546304 TRIM10Q9UDY6 481 aa6.53□□□□□ -1.36
PRKDC-211ENST00000546304 SLC12A6Q9UHW9 1150 aa6.53□□□□□ -1.36
PRKDC-211ENST00000546304 FBXL21Q9UKT6 434 aa6.53□□□□□ -1.36
PRKDC-211ENST00000546304 USP18Q9UMW8 372 aa6.53□□□□□ -1.36
PRKDC-211ENST00000546304 NEU3Q9UQ49 428 aa6.53□□□□□ -1.36
PRKDC-211ENST00000546304 HS3ST4Q9Y661 456 aa6.53□□□□□ -1.36
PRKDC-211ENST00000546304 PIAS3Q9Y6X2 628 aa6.53□□□□□ -1.36
PRKDC-211ENST00000546304 VPS13AQ96RL7 3174 aa6.53□□□□□ -1.36
PRKDC-211ENST00000546304 CACNA1HO95180 2353 aa6.53□□□□□ -1.36
PRKDC-211ENST00000546304 SHROOM3Q8TF72 1996 aa6.53□□□□□ -1.36
PRKDC-211ENST00000546304 CKAP5Q14008 2032 aa6.52□□□□□ -1.37
PRKDC-211ENST00000546304 NUP205Q92621 2012 aa6.52□□□□□ -1.37
PRKDC-211ENST00000546304 KMT2EQ8IZD2 1858 aa6.52□□□□□ -1.37
PRKDC-211ENST00000546304 GOLGA6L7A0A1B0GV03 622 aa6.52□□□□□ -1.37
PRKDC-211ENST00000546304 A0A1B0GVM2 712 aa6.52□□□□□ -1.37
PRKDC-211ENST00000546304 GRID2IPA4D2P6 1211 aa6.52□□□□□ -1.37
PRKDC-211ENST00000546304 TCAF2A6NFQ2 919 aa6.52□□□□□ -1.37
PRKDC-211ENST00000546304 SPECC1L-ADORA2AF8WAN1 911 aa6.52□□□□□ -1.37
PRKDC-211ENST00000546304 TRDMT1O14717 391 aaKnown RBP6.52□□□□□ -1.37
PRKDC-211ENST00000546304 DCXO43602 365 aa6.52□□□□□ -1.37
PRKDC-211ENST00000546304 BUB1O43683 1085 aa6.52□□□□□ -1.37
PRKDC-211ENST00000546304 KRT86O43790 486 aa6.52□□□□□ -1.37
PRKDC-211ENST00000546304 SPOPO43791 374 aa6.52□□□□□ -1.37
PRKDC-211ENST00000546304 CACNG3O60359 315 aa6.52□□□□□ -1.37
PRKDC-211ENST00000546304 PENKP01210 267 aaPredicted RBP6.52□□□□□ -1.37
PRKDC-211ENST00000546304 CYBBP04839 570 aa6.52□□□□□ -1.37
PRKDC-211ENST00000546304 TYRP14679 529 aa6.52□□□□□ -1.37
PRKDC-211ENST00000546304 TACR2P21452 398 aa6.52□□□□□ -1.37
PRKDC-211ENST00000546304 IL1R2P27930 398 aa6.52□□□□□ -1.37
PRKDC-211ENST00000546304 HOXD9P28356 352 aaPredicted RBP6.52□□□□□ -1.37
PRKDC-211ENST00000546304 ADRA1BP35368 520 aa6.52□□□□□ -1.37
PRKDC-211ENST00000546304 ARHGAP25P42331 645 aa6.52□□□□□ -1.37
PRKDC-211ENST00000546304 SSR1P43307 286 aaKnown RBP6.52□□□□□ -1.37
PRKDC-211ENST00000546304 SOX9P48436 509 aa6.52□□□□□ -1.37
PRKDC-211ENST00000546304 SGSHP51688 502 aa6.52□□□□□ -1.37
PRKDC-211ENST00000546304 NAP1L1P55209 391 aaKnown RBP6.52□□□□□ -1.37
PRKDC-211ENST00000546304 AUHQ13825 339 aaKnown RBP6.52□□□□□ -1.37
PRKDC-211ENST00000546304 MLF2Q15773 248 aaPredicted RBP6.52□□□□□ -1.37
PRKDC-211ENST00000546304 IFI16Q16666 785 aaKnown RBP6.52□□□□□ -1.37
PRKDC-211ENST00000546304 MSMPQ1L6U9 139 aa6.52□□□□□ -1.37
PRKDC-211ENST00000546304 GAB4Q2WGN9 574 aa6.52□□□□□ -1.37
PRKDC-211ENST00000546304 ANO4Q32M45 955 aa6.52□□□□□ -1.37
PRKDC-211ENST00000546304 RABGAP1LQ5R372 815 aa6.52□□□□□ -1.37
PRKDC-211ENST00000546304 ACBD5Q5T8D3 534 aaPredicted RBP6.52□□□□□ -1.37
PRKDC-211ENST00000546304 MANEALQ5VSG8 457 aa6.52□□□□□ -1.37
PRKDC-211ENST00000546304 FYB2Q5VWT5 728 aa6.52□□□□□ -1.37
PRKDC-211ENST00000546304 SCYL2Q6P3W7 929 aa6.52□□□□□ -1.37
PRKDC-211ENST00000546304 TPGS1Q6ZTW0 290 aa6.52□□□□□ -1.37
PRKDC-211ENST00000546304 TPRG1Q6ZUI0 275 aa6.52□□□□□ -1.37
PRKDC-211ENST00000546304 SLFN11Q7Z7L1 901 aa6.52□□□□□ -1.37
PRKDC-211ENST00000546304 C12orf40Q86WS4 652 aa6.52□□□□□ -1.37
PRKDC-211ENST00000546304 CIR1Q86X95 450 aaPredicted RBP6.52□□□□□ -1.37
PRKDC-211ENST00000546304 TMEM25Q86YD3 366 aa6.52□□□□□ -1.37
PRKDC-211ENST00000546304 LGI2Q8N0V4 545 aa6.52□□□□□ -1.37
PRKDC-211ENST00000546304 TTC8Q8TAM2 541 aa6.52□□□□□ -1.37
PRKDC-211ENST00000546304 CHFRQ96EP1 664 aa6.52□□□□□ -1.37
PRKDC-211ENST00000546304 MYEOVQ96EZ4 313 aa6.52□□□□□ -1.37
PRKDC-211ENST00000546304 P2RY11Q96G91 374 aa6.52□□□□□ -1.37
PRKDC-211ENST00000546304 ZNF830Q96NB3 372 aaPredicted RBP6.52□□□□□ -1.37
PRKDC-211ENST00000546304 RPRD1AQ96P16 312 aaPredicted RBP6.52□□□□□ -1.37
PRKDC-211ENST00000546304 HAPLN3Q96S86 360 aa6.52□□□□□ -1.37
PRKDC-211ENST00000546304 PRMT1Q99873 361 aaKnown RBP6.52□□□□□ -1.37
PRKDC-211ENST00000546304 ZWILCHQ9H900 591 aa6.52□□□□□ -1.37
PRKDC-211ENST00000546304 HEBP1Q9NRV9 189 aa6.52□□□□□ -1.37
PRKDC-211ENST00000546304 STAU2Q9NUL3 570 aaKnown RBP eCLIP6.52□□□□□ -1.37
PRKDC-211ENST00000546304 GPATCH2LQ9NWQ4 482 aa6.52□□□□□ -1.37
PRKDC-211ENST00000546304 PCSK1NQ9UHG2 260 aa6.52□□□□□ -1.37
PRKDC-211ENST00000546304 VANGL2Q9ULK5 521 aa6.52□□□□□ -1.37
PRKDC-211ENST00000546304 FZD10Q9ULW2 581 aa6.52□□□□□ -1.37
PRKDC-211ENST00000546304 CA14Q9ULX7 337 aa6.52□□□□□ -1.37
PRKDC-211ENST00000546304 PPP2R2CQ9Y2T4 447 aa6.52□□□□□ -1.37
PRKDC-211ENST00000546304 SNX10Q9Y5X0 201 aa6.52□□□□□ -1.37
PRKDC-211ENST00000546304 CAPN6Q9Y6Q1 641 aa6.52□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms