RNA–Protein interactions for RNA: ENST00000544585.5

CPSF7-222, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 2

Gene CPSF7, Length 722 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-222ENST00000544585 HNRNPDLO14979 420 aaKnown RBP6.54□□□□□ -1.36
CPSF7-222ENST00000544585 CHADO15335 359 aa6.54□□□□□ -1.36
CPSF7-222ENST00000544585 ADAM12O43184 909 aa6.54□□□□□ -1.36
CPSF7-222ENST00000544585 THAP12O43422 761 aa6.54□□□□□ -1.36
CPSF7-222ENST00000544585 ATG13O75143 517 aa6.54□□□□□ -1.36
CPSF7-222ENST00000544585 B3GAT3O94766 335 aa6.54□□□□□ -1.36
CPSF7-222ENST00000544585 SLITRK3O94933 977 aa6.54□□□□□ -1.36
CPSF7-222ENST00000544585 TDP2O95551 362 aa6.54□□□□□ -1.36
CPSF7-222ENST00000544585 DHRS4L1P0CG22 281 aa6.54□□□□□ -1.36
CPSF7-222ENST00000544585 GCFC2P16383 781 aaKnown RBP6.54□□□□□ -1.36
CPSF7-222ENST00000544585 VIPR1P32241 457 aa6.54□□□□□ -1.36
CPSF7-222ENST00000544585 PTPN7P35236 360 aa6.54□□□□□ -1.36
CPSF7-222ENST00000544585 PIK3CGP48736 1102 aa6.54□□□□□ -1.36
CPSF7-222ENST00000544585 CD97P48960 835 aa6.54□□□□□ -1.36
CPSF7-222ENST00000544585 CTXN1P60606 82 aa6.54□□□□□ -1.36
CPSF7-222ENST00000544585 RPS16P62249 146 aaKnown RBP6.54□□□□□ -1.36
CPSF7-222ENST00000544585 MBTD1Q05BQ5 628 aa6.54□□□□□ -1.36
CPSF7-222ENST00000544585 TBX2Q13207 712 aaPredicted RBP6.54□□□□□ -1.36
CPSF7-222ENST00000544585 ADAM9Q13443 819 aa6.54□□□□□ -1.36
CPSF7-222ENST00000544585 PTPAQ15257 358 aa6.54□□□□□ -1.36
CPSF7-222ENST00000544585 PFKFB4Q16877 469 aa6.54□□□□□ -1.36
CPSF7-222ENST00000544585 FAM187BQ17R55 369 aa6.54□□□□□ -1.36
CPSF7-222ENST00000544585 ZACNQ401N2 412 aa6.54□□□□□ -1.36
CPSF7-222ENST00000544585 FKBP15Q5T1M5 1219 aa6.54□□□□□ -1.36
CPSF7-222ENST00000544585 STPG1Q5TH74 334 aa6.54□□□□□ -1.36
CPSF7-222ENST00000544585 TPGS2Q68CL5 300 aa6.54□□□□□ -1.36
CPSF7-222ENST00000544585 Q6ZUG5 572 aa6.54□□□□□ -1.36
CPSF7-222ENST00000544585 WDR5BQ86VZ2 330 aa6.54□□□□□ -1.36
CPSF7-222ENST00000544585 FAM90A1Q86YD7 464 aa6.54□□□□□ -1.36
CPSF7-222ENST00000544585 IRF2BP1Q8IU81 584 aa6.54□□□□□ -1.36
CPSF7-222ENST00000544585 YAF2Q8IY57 180 aa6.54□□□□□ -1.36
CPSF7-222ENST00000544585 BLIDQ8IZY5 108 aa6.54□□□□□ -1.36
CPSF7-222ENST00000544585 ATG16L2Q8NAA4 619 aa6.54□□□□□ -1.36
CPSF7-222ENST00000544585 STON2Q8WXE9 905 aa6.54□□□□□ -1.36
CPSF7-222ENST00000544585 SNX22Q96L94 193 aa6.54□□□□□ -1.36
CPSF7-222ENST00000544585 TCEANC2Q96MN5 208 aa6.54□□□□□ -1.36
CPSF7-222ENST00000544585 UROC1Q96N76 676 aa6.54□□□□□ -1.36
CPSF7-222ENST00000544585 SYT3Q9BQG1 590 aa6.54□□□□□ -1.36
CPSF7-222ENST00000544585 EIF2AK1Q9BQI3 630 aaKnown RBP6.54□□□□□ -1.36
CPSF7-222ENST00000544585 PAAF1Q9BRP4 392 aa6.54□□□□□ -1.36
CPSF7-222ENST00000544585 ADPGKQ9BRR6 497 aa6.54□□□□□ -1.36
CPSF7-222ENST00000544585 C1orf43Q9BWL3 253 aa6.54□□□□□ -1.36
CPSF7-222ENST00000544585 SLC26A6Q9BXS9 759 aa6.54□□□□□ -1.36
CPSF7-222ENST00000544585 STK33Q9BYT3 514 aa6.54□□□□□ -1.36
CPSF7-222ENST00000544585 TRIM54Q9BYV2 358 aa6.54□□□□□ -1.36
CPSF7-222ENST00000544585 ARRDC1-AS1Q9H2J1 176 aa6.54□□□□□ -1.36
CPSF7-222ENST00000544585 NXF3Q9H4D5 531 aaKnown RBP6.54□□□□□ -1.36
CPSF7-222ENST00000544585 TRPV4Q9HBA0 871 aa6.54□□□□□ -1.36
CPSF7-222ENST00000544585 ANKEF1Q9NU02 776 aa6.54□□□□□ -1.36
CPSF7-222ENST00000544585 SIDT1Q9NXL6 827 aaKnown RBP6.54□□□□□ -1.36
CPSF7-222ENST00000544585 VPS54Q9P1Q0 977 aa6.54□□□□□ -1.36
CPSF7-222ENST00000544585 SLC39A10Q9ULF5 831 aa6.54□□□□□ -1.36
CPSF7-222ENST00000544585 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP6.54□□□□□ -1.36
CPSF7-222ENST00000544585 SDK1Q7Z5N4 2213 aa6.54□□□□□ -1.36
CPSF7-222ENST00000544585 DNAH14Q0VDD8 3507 aa6.54□□□□□ -1.36
CPSF7-222ENST00000544585 FAM208BQ5VWN6 2430 aa6.53□□□□□ -1.36
CPSF7-222ENST00000544585 WDR27A2RRH5 827 aa6.53□□□□□ -1.36
CPSF7-222ENST00000544585 HRKO00198 91 aa6.53□□□□□ -1.36
CPSF7-222ENST00000544585 MSTNO14793 375 aa6.53□□□□□ -1.36
CPSF7-222ENST00000544585 EPB41L2O43491 1005 aaKnown RBP6.53□□□□□ -1.36
CPSF7-222ENST00000544585 ITGA10O75578 1167 aa6.53□□□□□ -1.36
CPSF7-222ENST00000544585 AKAP3O75969 853 aa6.53□□□□□ -1.36
CPSF7-222ENST00000544585 LYPLA2O95372 231 aa6.53□□□□□ -1.36
CPSF7-222ENST00000544585 WNT11O96014 354 aa6.53□□□□□ -1.36
CPSF7-222ENST00000544585 PROCP04070 461 aa6.53□□□□□ -1.36
CPSF7-222ENST00000544585 CD1AP06126 327 aa6.53□□□□□ -1.36
CPSF7-222ENST00000544585 ANXA2P07355 339 aaKnown RBP6.53□□□□□ -1.36
CPSF7-222ENST00000544585 CEBPBP17676 345 aa6.53□□□□□ -1.36
CPSF7-222ENST00000544585 PFKLP17858 780 aa6.53□□□□□ -1.36
CPSF7-222ENST00000544585 GLRA2P23416 452 aa6.53□□□□□ -1.36
CPSF7-222ENST00000544585 FCARP24071 287 aa6.53□□□□□ -1.36
CPSF7-222ENST00000544585 RAP1GAPP47736 663 aa6.53□□□□□ -1.36
CPSF7-222ENST00000544585 ARFIP2P53365 341 aa6.53□□□□□ -1.36
CPSF7-222ENST00000544585 GEMIN4P57678 1058 aaKnown RBP6.53□□□□□ -1.36
CPSF7-222ENST00000544585 SLC13A2Q13183 592 aa6.53□□□□□ -1.36
CPSF7-222ENST00000544585 MTM1Q13496 603 aa6.53□□□□□ -1.36
CPSF7-222ENST00000544585 CAPSQ13938 189 aa6.53□□□□□ -1.36
CPSF7-222ENST00000544585 EIF4HQ15056 248 aaKnown RBP6.53□□□□□ -1.36
CPSF7-222ENST00000544585 SLC5A9Q2M3M2 681 aa6.53□□□□□ -1.36
CPSF7-222ENST00000544585 ADCK5Q3MIX3 580 aa6.53□□□□□ -1.36
CPSF7-222ENST00000544585 EMC10Q5UCC4 262 aa6.53□□□□□ -1.36
CPSF7-222ENST00000544585 DAB2IPQ5VWQ8 1189 aa6.53□□□□□ -1.36
CPSF7-222ENST00000544585 SLC8B1Q6J4K2 584 aa6.53□□□□□ -1.36
CPSF7-222ENST00000544585 VITQ6UXI7 678 aa6.53□□□□□ -1.36
CPSF7-222ENST00000544585 HAUS6Q7Z4H7 955 aa6.53□□□□□ -1.36
CPSF7-222ENST00000544585 RALGPS2Q86X27 583 aaPredicted RBP6.53□□□□□ -1.36
CPSF7-222ENST00000544585 CACNA2D3Q8IZS8 1091 aa6.53□□□□□ -1.36
CPSF7-222ENST00000544585 HASPINQ8TF76 798 aa6.53□□□□□ -1.36
CPSF7-222ENST00000544585 CASKIN2Q8WXE0 1202 aa6.53□□□□□ -1.36
CPSF7-222ENST00000544585 SKA1Q96BD8 255 aa6.53□□□□□ -1.36
CPSF7-222ENST00000544585 LXNQ9BS40 222 aa6.53□□□□□ -1.36
CPSF7-222ENST00000544585 TMEM120AQ9BXJ8 343 aa6.53□□□□□ -1.36
CPSF7-222ENST00000544585 FZD8Q9H461 694 aa6.53□□□□□ -1.36
CPSF7-222ENST00000544585 CYP4F11Q9HBI6 524 aa6.53□□□□□ -1.36
CPSF7-222ENST00000544585 KCNMB3Q9NPA1 279 aa6.53□□□□□ -1.36
CPSF7-222ENST00000544585 SLAMF7Q9NQ25 335 aa6.53□□□□□ -1.36
CPSF7-222ENST00000544585 XPNPEP1Q9NQW7 623 aa6.53□□□□□ -1.36
CPSF7-222ENST00000544585 VPS45Q9NRW7 570 aa6.53□□□□□ -1.36
CPSF7-222ENST00000544585 RXFP3Q9NSD7 469 aa6.53□□□□□ -1.36
CPSF7-222ENST00000544585 GJB4Q9NTQ9 266 aa6.53□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 69.7 ms