RNA–Protein interactions for RNA: ENST00000539687.5

SPARC-209, Transcript of secreted protein acidic and cysteine rich, humanhuman

TSL 5

Gene SPARC, Length 511 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARC-209ENST00000539687 PBX3P40426 434 aa10.34□□□□□ -0.75
SPARC-209ENST00000539687 KPNA2P52292 529 aaKnown RBP10.34□□□□□ -0.75
SPARC-209ENST00000539687 LIMK2P53671 638 aa10.34□□□□□ -0.75
SPARC-209ENST00000539687 PRKAA2P54646 552 aa10.34□□□□□ -0.75
SPARC-209ENST00000539687 CDH4P55283 916 aa10.34□□□□□ -0.75
SPARC-209ENST00000539687 RAB33AQ14088 237 aa10.34□□□□□ -0.75
SPARC-209ENST00000539687 POLD3Q15054 466 aaPredicted RBP10.34□□□□□ -0.75
SPARC-209ENST00000539687 PABPC1LQ4VXU2 614 aaKnown RBP10.34□□□□□ -0.75
SPARC-209ENST00000539687 MROH9Q5TGP6 573 aa10.34□□□□□ -0.75
SPARC-209ENST00000539687 RAP1GAP2Q684P5 730 aa10.34□□□□□ -0.75
SPARC-209ENST00000539687 FBXL22Q6P050 247 aa10.34□□□□□ -0.75
SPARC-209ENST00000539687 ZNF783Q6ZMS7 281 aa10.34□□□□□ -0.75
SPARC-209ENST00000539687 KIAA0408Q6ZU52 694 aa10.34□□□□□ -0.75
SPARC-209ENST00000539687 CHST9Q7L1S5 443 aa10.34□□□□□ -0.75
SPARC-209ENST00000539687 DDX53Q86TM3 631 aaKnown RBP10.34□□□□□ -0.75
SPARC-209ENST00000539687 KCNMB4Q86W47 210 aa10.34□□□□□ -0.75
SPARC-209ENST00000539687 HERC6Q8IVU3 1022 aa10.34□□□□□ -0.75
SPARC-209ENST00000539687 TP53INP2Q8IXH6 220 aa10.34□□□□□ -0.75
SPARC-209ENST00000539687 SLC39A11Q8N1S5 342 aa10.34□□□□□ -0.75
SPARC-209ENST00000539687 TMEM199Q8N511 208 aa10.34□□□□□ -0.75
SPARC-209ENST00000539687 CNTD1Q8N815 330 aa10.34□□□□□ -0.75
SPARC-209ENST00000539687 ZNF689Q96CS4 500 aaPredicted RBP10.34□□□□□ -0.75
SPARC-209ENST00000539687 C7orf26Q96N11 449 aa10.34□□□□□ -0.75
SPARC-209ENST00000539687 FAM111AQ96PZ2 611 aa10.34□□□□□ -0.75
SPARC-209ENST00000539687 RBBP8Q99708 897 aa10.34□□□□□ -0.75
SPARC-209ENST00000539687 GORASP1Q9BQQ3 440 aa10.34□□□□□ -0.75
SPARC-209ENST00000539687 TSSK1BQ9BXA7 367 aa10.34□□□□□ -0.75
SPARC-209ENST00000539687 POLR1EQ9GZS1 481 aaKnown RBP10.34□□□□□ -0.75
SPARC-209ENST00000539687 C11orf49Q9H6J7 331 aa10.34□□□□□ -0.75
SPARC-209ENST00000539687 ARNT2Q9HBZ2 717 aa10.34□□□□□ -0.75
SPARC-209ENST00000539687 ASB3Q9Y575 518 aa10.34□□□□□ -0.75
SPARC-209ENST00000539687 FNDC1Q4ZHG4 1894 aaPredicted RBP10.34□□□□□ -0.75
SPARC-209ENST00000539687 VWA8A3KMH1 1905 aa10.33□□□□□ -0.76
SPARC-209ENST00000539687 ZCWPW2A0A1B0GU75 182 aa10.33□□□□□ -0.76
SPARC-209ENST00000539687 ZNF840PA6NDX5 716 aa10.33□□□□□ -0.76
SPARC-209ENST00000539687 FOXO6A8MYZ6 492 aa10.33□□□□□ -0.76
SPARC-209ENST00000539687 NT5C1B-RDH14C9J2C7 533 aa10.33□□□□□ -0.76
SPARC-209ENST00000539687 ATP9BO43861 1147 aa10.33□□□□□ -0.76
SPARC-209ENST00000539687 CLDN11O75508 207 aa10.33□□□□□ -0.76
SPARC-209ENST00000539687 UPP2O95045 317 aa10.33□□□□□ -0.76
SPARC-209ENST00000539687 TIMP1P01033 207 aa10.33□□□□□ -0.76
SPARC-209ENST00000539687 EPOP01588 193 aa10.33□□□□□ -0.76
SPARC-209ENST00000539687 HLA-DQB2P05538 268 aa10.33□□□□□ -0.76
SPARC-209ENST00000539687 COL6A2P12110 1019 aa10.33□□□□□ -0.76
SPARC-209ENST00000539687 HOXB8P17481 243 aaPredicted RBP10.33□□□□□ -0.76
SPARC-209ENST00000539687 PFKLP17858 780 aa10.33□□□□□ -0.76
SPARC-209ENST00000539687 GRK2P25098 689 aa10.33□□□□□ -0.76
SPARC-209ENST00000539687 TYK2P29597 1187 aa10.33□□□□□ -0.76
SPARC-209ENST00000539687 OR1E1P30953 314 aa10.33□□□□□ -0.76
SPARC-209ENST00000539687 ADRA1AP35348 466 aa10.33□□□□□ -0.76
SPARC-209ENST00000539687 MAGEA12P43365 314 aa10.33□□□□□ -0.76
SPARC-209ENST00000539687 RASSF2P50749 326 aa10.33□□□□□ -0.76
SPARC-209ENST00000539687 EPHB3P54753 998 aa10.33□□□□□ -0.76
SPARC-209ENST00000539687 PPARDQ03181 441 aa10.33□□□□□ -0.76
SPARC-209ENST00000539687 TAF1BQ53T94 588 aaPredicted RBP10.33□□□□□ -0.76
SPARC-209ENST00000539687 RASIP1Q5U651 963 aa10.33□□□□□ -0.76
SPARC-209ENST00000539687 KIAA0930Q6ICG6 404 aaPredicted RBP10.33□□□□□ -0.76
SPARC-209ENST00000539687 PRSS55Q6UWB4 352 aaPredicted RBP10.33□□□□□ -0.76
SPARC-209ENST00000539687 RSPO2Q6UXX9 243 aaPredicted RBP10.33□□□□□ -0.76
SPARC-209ENST00000539687 LIN28BQ6ZN17 250 aaKnown RBP eCLIP10.33□□□□□ -0.762e-6■■■■□ 20.6
SPARC-209ENST00000539687 STRA8Q7Z7C7 330 aa10.33□□□□□ -0.76
SPARC-209ENST00000539687 C14orf80Q86SX3 495 aa10.33□□□□□ -0.76
SPARC-209ENST00000539687 SETD3Q86TU7 594 aaPredicted RBP10.33□□□□□ -0.76
SPARC-209ENST00000539687 ZNF354CQ86Y25 554 aa10.33□□□□□ -0.76
SPARC-209ENST00000539687 NUDCD3Q8IVD9 361 aa10.33□□□□□ -0.76
SPARC-209ENST00000539687 CNTN4Q8IWV2 1026 aa10.33□□□□□ -0.76
SPARC-209ENST00000539687 TTC9BQ8N6N2 239 aa10.33□□□□□ -0.76
SPARC-209ENST00000539687 CCDC63Q8NA47 563 aa10.33□□□□□ -0.76
SPARC-209ENST00000539687 IPMKQ8NFU5 416 aa10.33□□□□□ -0.76
SPARC-209ENST00000539687 USP33Q8TEY7 942 aa10.33□□□□□ -0.76
SPARC-209ENST00000539687 GIPC2Q8TF65 315 aa10.33□□□□□ -0.76
SPARC-209ENST00000539687 SCG3Q8WXD2 468 aaKnown RBP10.33□□□□□ -0.76
SPARC-209ENST00000539687 E2F7Q96AV8 911 aa10.33□□□□□ -0.76
SPARC-209ENST00000539687 IMP4Q96G21 291 aaKnown RBP10.33□□□□□ -0.76
SPARC-209ENST00000539687 ZNF333Q96JL9 665 aa10.33□□□□□ -0.76
SPARC-209ENST00000539687 FICDQ9BVA6 458 aa10.33□□□□□ -0.76
SPARC-209ENST00000539687 MRPL17Q9NRX2 175 aaKnown RBP10.33□□□□□ -0.76
SPARC-209ENST00000539687 C20orf96Q9NUD7 363 aaPredicted RBP10.33□□□□□ -0.76
SPARC-209ENST00000539687 TXLNGQ9NUQ3 528 aa10.33□□□□□ -0.76
SPARC-209ENST00000539687 PCMTD2Q9NV79 361 aa10.33□□□□□ -0.76
SPARC-209ENST00000539687 MPP6Q9NZW5 540 aa10.33□□□□□ -0.76
SPARC-209ENST00000539687 NUDT5Q9UKK9 219 aa10.33□□□□□ -0.76
SPARC-209ENST00000539687 MAGED2Q9UNF1 606 aaPredicted RBP10.33□□□□□ -0.76
SPARC-209ENST00000539687 ATP11BQ9Y2G3 1177 aa10.33□□□□□ -0.76
SPARC-209ENST00000539687 MTO1Q9Y2Z2 717 aaKnown RBP10.33□□□□□ -0.76
SPARC-209ENST00000539687 TCAF1Q9Y4C2 921 aa10.33□□□□□ -0.76
SPARC-209ENST00000539687 YIPF1Q9Y548 306 aa10.33□□□□□ -0.76
SPARC-209ENST00000539687 NR2E3Q9Y5X4 410 aa10.33□□□□□ -0.76
SPARC-209ENST00000539687 MICAL3Q7RTP6 2002 aa10.33□□□□□ -0.76
SPARC-209ENST00000539687 F5H423 210 aaPredicted RBP10.32□□□□□ -0.76
SPARC-209ENST00000539687 C2CD2LO14523 706 aa10.32□□□□□ -0.76
SPARC-209ENST00000539687 PRRG1O14668 218 aa10.32□□□□□ -0.76
SPARC-209ENST00000539687 KIAA0355O15063 1070 aa10.32□□□□□ -0.76
SPARC-209ENST00000539687 PRAMEF11O60813 436 aa10.32□□□□□ -0.76
SPARC-209ENST00000539687 SIN3BO75182 1162 aa10.32□□□□□ -0.76
SPARC-209ENST00000539687 SNUPNO95149 360 aaKnown RBP10.32□□□□□ -0.76
SPARC-209ENST00000539687 VNN2O95498 520 aa10.32□□□□□ -0.76
SPARC-209ENST00000539687 BPGMP07738 259 aa10.32□□□□□ -0.76
SPARC-209ENST00000539687 HLA-DPA1P20036 260 aa10.32□□□□□ -0.76
SPARC-209ENST00000539687 GJA8P48165 433 aa10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms