RNA–Protein interactions for RNA: ENST00000538827.5

CD4-208, Transcript of CD4 molecule, humanhuman

TSL 1 (best)

Gene CD4, Length 985 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD4-208ENST00000538827 RPP25Q9BUL9 199 aaKnown RBP14.42□□□□□ -0.1
CD4-208ENST00000538827 TRMT61BQ9BVS5 477 aaKnown RBP14.42□□□□□ -0.1
CD4-208ENST00000538827 PHF7Q9BWX1 381 aaPredicted RBP14.42□□□□□ -0.1
CD4-208ENST00000538827 BRD9Q9H8M2 597 aa14.42□□□□□ -0.1
CD4-208ENST00000538827 ECT2Q9H8V3 914 aa14.42□□□□□ -0.1
CD4-208ENST00000538827 FAM114A2Q9NRY5 505 aa14.42□□□□□ -0.1
CD4-208ENST00000538827 GGA2Q9UJY4 613 aa14.42□□□□□ -0.1
CD4-208ENST00000538827 NEU2Q9Y3R4 380 aa14.42□□□□□ -0.1
CD4-208ENST00000538827 C5orf60A6NFR6 353 aa14.41□□□□□ -0.1
CD4-208ENST00000538827 DNALI1O14645 258 aaPredicted RBP14.41□□□□□ -0.1
CD4-208ENST00000538827 KDELR3O43731 214 aa14.41□□□□□ -0.1
CD4-208ENST00000538827 CACNG3O60359 315 aa14.41□□□□□ -0.1
CD4-208ENST00000538827 OPHN1O60890 802 aa14.41□□□□□ -0.1
CD4-208ENST00000538827 HLA-DQB2P05538 268 aa14.41□□□□□ -0.1
CD4-208ENST00000538827 CCNB1P14635 433 aa14.41□□□□□ -0.1
CD4-208ENST00000538827 PSMB4P28070 264 aa14.41□□□□□ -0.1
CD4-208ENST00000538827 LMAN1P49257 510 aa14.41□□□□□ -0.1
CD4-208ENST00000538827 DGKGP49619 791 aa14.41□□□□□ -0.1
CD4-208ENST00000538827 VSNL1P62760 191 aa14.41□□□□□ -0.1
CD4-208ENST00000538827 IFI35P80217 286 aaPredicted RBP14.41□□□□□ -0.1
CD4-208ENST00000538827 ZXDAP98168 799 aa14.41□□□□□ -0.1
CD4-208ENST00000538827 NR1H3Q13133 447 aa14.41□□□□□ -0.1
CD4-208ENST00000538827 RUNX3Q13761 415 aa14.41□□□□□ -0.1
CD4-208ENST00000538827 LBRQ14739 615 aaKnown RBP14.41□□□□□ -0.1
CD4-208ENST00000538827 PLEKHG6Q3KR16 790 aa14.41□□□□□ -0.1
CD4-208ENST00000538827 FUT11Q495W5 492 aa14.41□□□□□ -0.1
CD4-208ENST00000538827 RNF43Q68DV7 783 aa14.41□□□□□ -0.1
CD4-208ENST00000538827 ITPRIPL1Q6GPH6 555 aa14.41□□□□□ -0.1
CD4-208ENST00000538827 ASTLQ6HA08 431 aaPredicted RBP14.41□□□□□ -0.1
CD4-208ENST00000538827 GRAMD4Q6IC98 578 aa14.41□□□□□ -0.1
CD4-208ENST00000538827 LINGO4Q6UY18 593 aa14.41□□□□□ -0.1
CD4-208ENST00000538827 BBS5Q8N3I7 341 aa14.41□□□□□ -0.1
CD4-208ENST00000538827 MAML1Q92585 1016 aa14.41□□□□□ -0.1
CD4-208ENST00000538827 RUBCNQ92622 972 aa14.41□□□□□ -0.1
CD4-208ENST00000538827 FAM83CQ9BQN1 747 aa14.41□□□□□ -0.1
CD4-208ENST00000538827 FEM1AQ9BSK4 669 aa14.41□□□□□ -0.1
CD4-208ENST00000538827 C2orf49Q9BVC5 232 aaPredicted RBP14.41□□□□□ -0.1
CD4-208ENST00000538827 CINPQ9BW66 212 aaPredicted RBP14.41□□□□□ -0.1
CD4-208ENST00000538827 PDFQ9HBH1 243 aa14.41□□□□□ -0.1
CD4-208ENST00000538827 NT5MQ9NPB1 228 aa14.41□□□□□ -0.1
CD4-208ENST00000538827 RAB6BQ9NRW1 208 aa14.41□□□□□ -0.1
CD4-208ENST00000538827 RBM22Q9NW64 420 aaKnown RBP eCLIP14.41□□□□□ -0.1
CD4-208ENST00000538827 VPS51Q9UID3 782 aa14.41□□□□□ -0.1
CD4-208ENST00000538827 ACTL7AQ9Y615 435 aa14.41□□□□□ -0.1
CD4-208ENST00000538827 E7EVH7 732 aa14.4□□□□□ -0.1
CD4-208ENST00000538827 CHADO15335 359 aa14.4□□□□□ -0.1
CD4-208ENST00000538827 ZBTB24O43167 697 aaPredicted RBP14.4□□□□□ -0.1
CD4-208ENST00000538827 GCATO75600 419 aa14.4□□□□□ -0.1
CD4-208ENST00000538827 NFKB1P19838 968 aa14.4□□□□□ -0.1
CD4-208ENST00000538827 MCM3P25205 808 aa14.4□□□□□ -0.1
CD4-208ENST00000538827 HLA-FP30511 346 aa14.4□□□□□ -0.1
CD4-208ENST00000538827 MMP13P45452 471 aa14.4□□□□□ -0.1
CD4-208ENST00000538827 CARSP49589 748 aaKnown RBP14.4□□□□□ -0.1
CD4-208ENST00000538827 ITGA8P53708 1063 aa14.4□□□□□ -0.1
CD4-208ENST00000538827 ARF5P84085 180 aa14.4□□□□□ -0.1
CD4-208ENST00000538827 ITKQ08881 620 aa14.4□□□□□ -0.1
CD4-208ENST00000538827 TRADDQ15628 312 aa14.4□□□□□ -0.1
CD4-208ENST00000538827 SYCP2LQ5T4T6 812 aa14.4□□□□□ -0.1
CD4-208ENST00000538827 MARC1Q5VT66 337 aa14.4□□□□□ -0.1
CD4-208ENST00000538827 C4orf22Q6V702 233 aa14.4□□□□□ -0.1
CD4-208ENST00000538827 AHI1Q8N157 1196 aa14.4□□□□□ -0.1
CD4-208ENST00000538827 BBOF1Q8ND07 529 aa14.4□□□□□ -0.1
CD4-208ENST00000538827 CSGALNACT1Q8TDX6 532 aa14.4□□□□□ -0.1
CD4-208ENST00000538827 VAT1Q99536 393 aa14.4□□□□□ -0.1
CD4-208ENST00000538827 ACE2Q9BYF1 805 aaPredicted RBP14.4□□□□□ -0.1
CD4-208ENST00000538827 PARD6BQ9BYG5 372 aa14.4□□□□□ -0.1
CD4-208ENST00000538827 GBA3Q9H227 469 aa14.4□□□□□ -0.1
CD4-208ENST00000538827 GDF3Q9NR23 364 aa14.4□□□□□ -0.1
CD4-208ENST00000538827 GTSE1Q9NYZ3 720 aa14.4□□□□□ -0.1
CD4-208ENST00000538827 SLC25A13Q9UJS0 675 aa14.4□□□□□ -0.1
CD4-208ENST00000538827 TRHDEQ9UKU6 1024 aa14.4□□□□□ -0.1
CD4-208ENST00000538827 COL4A2P08572 1712 aa14.4□□□□□ -0.1
CD4-208ENST00000538827 ANHXE9PGG2 379 aa14.39□□□□□ -0.11
CD4-208ENST00000538827 TRIM24O15164 1050 aa14.39□□□□□ -0.11
CD4-208ENST00000538827 TULP3O75386 442 aa14.39□□□□□ -0.11
CD4-208ENST00000538827 SEC31AO94979 1220 aaKnown RBP14.39□□□□□ -0.11
CD4-208ENST00000538827 METTL18O95568 372 aa14.39□□□□□ -0.11
CD4-208ENST00000538827 AVPR2P30518 371 aa14.39□□□□□ -0.11
CD4-208ENST00000538827 FDFT1P37268 417 aa14.39□□□□□ -0.11
CD4-208ENST00000538827 RENBPP51606 427 aa14.39□□□□□ -0.11
CD4-208ENST00000538827 MAXP61244 160 aa14.39□□□□□ -0.11
CD4-208ENST00000538827 SLC10A7Q0GE19 358 aa14.39□□□□□ -0.11
CD4-208ENST00000538827 CUL1Q13616 776 aa14.39□□□□□ -0.11
CD4-208ENST00000538827 SLC12A1Q13621 1099 aa14.39□□□□□ -0.11
CD4-208ENST00000538827 ITPRIPL2Q3MIP1 535 aa14.39□□□□□ -0.11
CD4-208ENST00000538827 TEX44Q53QW1 395 aa14.39□□□□□ -0.11
CD4-208ENST00000538827 RETSATQ6NUM9 610 aa14.39□□□□□ -0.11
CD4-208ENST00000538827 PLCD3Q8N3E9 789 aa14.39□□□□□ -0.11
CD4-208ENST00000538827 WFIKKN2Q8TEU8 576 aa14.39□□□□□ -0.11
CD4-208ENST00000538827 ALG14Q96F25 216 aa14.39□□□□□ -0.11
CD4-208ENST00000538827 ZNF599Q96NL3 588 aa14.39□□□□□ -0.11
CD4-208ENST00000538827 IL12RB2Q99665 862 aa14.39□□□□□ -0.11
CD4-208ENST00000538827 SLC2A11Q9BYW1 496 aa14.39□□□□□ -0.11
CD4-208ENST00000538827 HAUS2Q9NVX0 235 aa14.39□□□□□ -0.11
CD4-208ENST00000538827 GRHL1Q9NZI5 618 aa14.39□□□□□ -0.11
CD4-208ENST00000538827 WHRNQ9P202 907 aa14.39□□□□□ -0.11
CD4-208ENST00000538827 LIMD1Q9UGP4 676 aa14.39□□□□□ -0.11
CD4-208ENST00000538827 SEPT3Q9UH03 358 aa14.39□□□□□ -0.11
CD4-208ENST00000538827 ANAPC5Q9UJX4 755 aa14.39□□□□□ -0.11
CD4-208ENST00000538827 INTS6Q9UL03 887 aaKnown RBP14.39□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms