RNA–Protein interactions for RNA: ENST00000537024.5

SNHG1-203, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5

Gene SNHG1, Length 532 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-203ENST00000537024 SCAPQ12770 1279 aa4.39□□□□□ -1.71
SNHG1-203ENST00000537024 PTCHD3Q3KNS1 767 aa4.39□□□□□ -1.71
SNHG1-203ENST00000537024 CERCAMQ5T4B2 595 aa4.39□□□□□ -1.71
SNHG1-203ENST00000537024 INTS11Q5TA45 600 aaKnown RBP4.39□□□□□ -1.71
SNHG1-203ENST00000537024 CCDC30Q5VVM6 783 aa4.39□□□□□ -1.71
SNHG1-203ENST00000537024 SPTY2D1Q68D10 685 aaPredicted RBP4.39□□□□□ -1.71
SNHG1-203ENST00000537024 RGS7BPQ6MZT1 257 aaPredicted RBP4.39□□□□□ -1.71
SNHG1-203ENST00000537024 TATDN1Q6P1N9 297 aa4.39□□□□□ -1.71
SNHG1-203ENST00000537024 GLB1LQ6UWU2 654 aa4.39□□□□□ -1.71
SNHG1-203ENST00000537024 MAATS1Q7Z4T9 603 aa4.39□□□□□ -1.71
SNHG1-203ENST00000537024 MAPKAPK5Q8IW41 473 aa4.39□□□□□ -1.71
SNHG1-203ENST00000537024 SLC44A2Q8IWA5 706 aaPredicted RBP4.39□□□□□ -1.71
SNHG1-203ENST00000537024 DBF4BQ8NFT6 615 aa4.39□□□□□ -1.71
SNHG1-203ENST00000537024 ABHD5Q8WTS1 349 aa4.39□□□□□ -1.71
SNHG1-203ENST00000537024 AFG1LQ8WV93 481 aa4.39□□□□□ -1.71
SNHG1-203ENST00000537024 THAP4Q8WY91 577 aa4.39□□□□□ -1.71
SNHG1-203ENST00000537024 LPIN2Q92539 896 aa4.39□□□□□ -1.71
SNHG1-203ENST00000537024 SNX19Q92543 992 aa4.39□□□□□ -1.71
SNHG1-203ENST00000537024 SKA1Q96BD8 255 aa4.39□□□□□ -1.71
SNHG1-203ENST00000537024 SEC62Q99442 399 aaKnown RBP4.39□□□□□ -1.71
SNHG1-203ENST00000537024 IFIH1Q9BYX4 1025 aaKnown RBP4.39□□□□□ -1.71
SNHG1-203ENST00000537024 TRIM5Q9C035 493 aa4.39□□□□□ -1.71
SNHG1-203ENST00000537024 CLMPQ9H6B4 373 aa4.39□□□□□ -1.71
SNHG1-203ENST00000537024 TLE6Q9H808 572 aa4.39□□□□□ -1.71
SNHG1-203ENST00000537024 RIC8AQ9NPQ8 531 aa4.39□□□□□ -1.71
SNHG1-203ENST00000537024 PRDM8Q9NQV8 689 aa4.39□□□□□ -1.71
SNHG1-203ENST00000537024 VPS45Q9NRW7 570 aa4.39□□□□□ -1.71
SNHG1-203ENST00000537024 TRPM5Q9NZQ8 1165 aa4.39□□□□□ -1.71
SNHG1-203ENST00000537024 WNT16Q9UBV4 365 aa4.39□□□□□ -1.71
SNHG1-203ENST00000537024 LPAR3Q9UBY5 353 aa4.39□□□□□ -1.71
SNHG1-203ENST00000537024 ZBTB32Q9Y2Y4 487 aaPredicted RBP4.39□□□□□ -1.71
SNHG1-203ENST00000537024 UTP18Q9Y5J1 556 aaKnown RBP eCLIP4.39□□□□□ -1.712e-26■□□□□ 8.9
SNHG1-203ENST00000537024 ITPR3Q14573 2671 aa4.39□□□□□ -1.71
SNHG1-203ENST00000537024 UBR5O95071 2799 aaPredicted RBP4.39□□□□□ -1.71
SNHG1-203ENST00000537024 ACACAQ13085 2346 aa4.38□□□□□ -1.71
SNHG1-203ENST00000537024 PNMA6EA0A0J9YXQ4 647 aa4.38□□□□□ -1.71
SNHG1-203ENST00000537024 CCDC78A2IDD5 438 aa4.38□□□□□ -1.71
SNHG1-203ENST00000537024 B9A039 149 aa4.38□□□□□ -1.71
SNHG1-203ENST00000537024 J3KTA2 159 aa4.38□□□□□ -1.71
SNHG1-203ENST00000537024 VWA5AO00534 786 aa4.38□□□□□ -1.71
SNHG1-203ENST00000537024 PER2O15055 1255 aa4.38□□□□□ -1.71
SNHG1-203ENST00000537024 WDR46O15213 610 aaKnown RBP4.38□□□□□ -1.71
SNHG1-203ENST00000537024 NARSO43776 548 aaKnown RBP4.38□□□□□ -1.71
SNHG1-203ENST00000537024 FAM155BO75949 473 aa4.38□□□□□ -1.71
SNHG1-203ENST00000537024 PLATP00750 562 aa4.38□□□□□ -1.71
SNHG1-203ENST00000537024 POLBP06746 335 aa4.38□□□□□ -1.71
SNHG1-203ENST00000537024 ANXA6P08133 673 aa4.38□□□□□ -1.71
SNHG1-203ENST00000537024 MMP3P08254 477 aa4.38□□□□□ -1.71
SNHG1-203ENST00000537024 CKMT1AP12532 417 aa4.38□□□□□ -1.71
SNHG1-203ENST00000537024 HGFP14210 728 aa4.38□□□□□ -1.71
SNHG1-203ENST00000537024 HOXB8P17481 243 aaPredicted RBP4.38□□□□□ -1.71
SNHG1-203ENST00000537024 XBP1P17861 261 aa4.38□□□□□ -1.71
SNHG1-203ENST00000537024 TNFAIP3P21580 790 aa4.38□□□□□ -1.71
SNHG1-203ENST00000537024 COMTP21964 271 aa4.38□□□□□ -1.71
SNHG1-203ENST00000537024 CD6P30203 668 aa4.38□□□□□ -1.71
SNHG1-203ENST00000537024 CCR10P46092 362 aa4.38□□□□□ -1.71
SNHG1-203ENST00000537024 NPTX2P47972 431 aa4.38□□□□□ -1.71
SNHG1-203ENST00000537024 AARSP49588 968 aaKnown RBP eCLIP4.38□□□□□ -1.715e-21■□□□□ 9.8
SNHG1-203ENST00000537024 PGDP52209 483 aa4.38□□□□□ -1.71
SNHG1-203ENST00000537024 RPS7P62081 194 aaKnown RBP4.38□□□□□ -1.71
SNHG1-203ENST00000537024 OCA2Q04671 838 aa4.38□□□□□ -1.71
SNHG1-203ENST00000537024 CSTF1Q05048 431 aaKnown RBP4.38□□□□□ -1.71
SNHG1-203ENST00000537024 G3BP1Q13283 466 aaKnown RBP eCLIP4.38□□□□□ -1.71
SNHG1-203ENST00000537024 CUL4BQ13620 913 aa4.38□□□□□ -1.71
SNHG1-203ENST00000537024 DYRK1AQ13627 763 aa4.38□□□□□ -1.71
SNHG1-203ENST00000537024 ATP1A4Q13733 1029 aa4.38□□□□□ -1.71
SNHG1-203ENST00000537024 CCNIQ14094 377 aa4.38□□□□□ -1.71
SNHG1-203ENST00000537024 HLXQ14774 488 aaPredicted RBP4.38□□□□□ -1.71
SNHG1-203ENST00000537024 LPAL2Q16609 132 aa4.38□□□□□ -1.71
SNHG1-203ENST00000537024 CD300EQ496F6 205 aaPredicted RBP4.38□□□□□ -1.71
SNHG1-203ENST00000537024 PDCD4Q53EL6 469 aaKnown RBP4.38□□□□□ -1.71
SNHG1-203ENST00000537024 RBM20Q5T481 1227 aaKnown RBP4.38□□□□□ -1.71
SNHG1-203ENST00000537024 ICE2Q659A1 982 aa4.38□□□□□ -1.71
SNHG1-203ENST00000537024 ABLIM2Q6H8Q1 611 aa4.38□□□□□ -1.71
SNHG1-203ENST00000537024 SNRNP48Q6IEG0 339 aaKnown RBP4.38□□□□□ -1.71
SNHG1-203ENST00000537024 RINT1Q6NUQ1 792 aa4.38□□□□□ -1.71
SNHG1-203ENST00000537024 Q6ZRM9 215 aa4.38□□□□□ -1.71
SNHG1-203ENST00000537024 MICALCLQ6ZW33 695 aa4.38□□□□□ -1.71
SNHG1-203ENST00000537024 HTR3DQ70Z44 454 aa4.38□□□□□ -1.71
SNHG1-203ENST00000537024 RSRC2Q7L4I2 434 aaKnown RBP4.38□□□□□ -1.71
SNHG1-203ENST00000537024 G2E3Q7L622 706 aa4.38□□□□□ -1.71
SNHG1-203ENST00000537024 RAB11FIP2Q7L804 512 aa4.38□□□□□ -1.71
SNHG1-203ENST00000537024 GDF7Q7Z4P5 450 aa4.38□□□□□ -1.71
SNHG1-203ENST00000537024 LRRTM4Q86VH4 590 aa4.38□□□□□ -1.71
SNHG1-203ENST00000537024 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP4.38□□□□□ -1.712e-11■■■■■ 59.4
SNHG1-203ENST00000537024 OR1N1Q8NGS0 311 aa4.38□□□□□ -1.71
SNHG1-203ENST00000537024 OR6Y1Q8NGX8 325 aa4.38□□□□□ -1.71
SNHG1-203ENST00000537024 SCAMP5Q8TAC9 235 aa4.38□□□□□ -1.71
SNHG1-203ENST00000537024 CPT1CQ8TCG5 803 aa4.38□□□□□ -1.71
SNHG1-203ENST00000537024 SH3RF3Q8TEJ3 882 aaPredicted RBP4.38□□□□□ -1.71
SNHG1-203ENST00000537024 TMEM171Q8WVE6 324 aa4.38□□□□□ -1.71
SNHG1-203ENST00000537024 WDR60Q8WVS4 1066 aa4.38□□□□□ -1.71
SNHG1-203ENST00000537024 DNAAF4Q8WXU2 420 aa4.38□□□□□ -1.71
SNHG1-203ENST00000537024 RSC1A1Q92681 617 aa4.38□□□□□ -1.71
SNHG1-203ENST00000537024 RILPL2Q969X0 211 aa4.38□□□□□ -1.71
SNHG1-203ENST00000537024 TRAPPC9Q96Q05 1148 aa4.38□□□□□ -1.71
SNHG1-203ENST00000537024 HIST1H2AAQ96QV6 131 aa4.38□□□□□ -1.71
SNHG1-203ENST00000537024 DDX23Q9BUQ8 820 aaKnown RBP4.38□□□□□ -1.71
SNHG1-203ENST00000537024 TEX13BQ9BXU2 312 aa4.38□□□□□ -1.71
SNHG1-203ENST00000537024 BRD8Q9H0E9 1235 aa4.38□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms