RNA–Protein interactions for RNA: ENST00000534720.1

NPIPA1-204, Transcript of nuclear pore complex interacting protein family member A1, human

TSL 5

Gene NPIPA1, Length 1,915 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NPIPA1-204	ENST00000534720	FAM159B	A6NKW6	160 aa		6.63	□□□□□ -1.35
NPIPA1-204	ENST00000534720	FOXO6	A8MYZ6	492 aa		6.63	□□□□□ -1.35
NPIPA1-204	ENST00000534720	TGM5	O43548	720 aa		6.63	□□□□□ -1.35
NPIPA1-204	ENST00000534720	RAMP2	O60895	175 aa		6.63	□□□□□ -1.35
NPIPA1-204	ENST00000534720	NEBL	O76041	1014 aa		6.63	□□□□□ -1.35
NPIPA1-204	ENST00000534720	PEX11B	O96011	259 aa		6.63	□□□□□ -1.35
NPIPA1-204	ENST00000534720	HLA-DQB2	P05538	268 aa		6.63	□□□□□ -1.35
NPIPA1-204	ENST00000534720	ADH1A	P07327	375 aa		6.63	□□□□□ -1.35
NPIPA1-204	ENST00000534720	OR1E1	P30953	314 aa		6.63	□□□□□ -1.35
NPIPA1-204	ENST00000534720	SLC6A4	P31645	630 aa		6.63	□□□□□ -1.35
NPIPA1-204	ENST00000534720	CDH4	P55283	916 aa		6.63	□□□□□ -1.35
NPIPA1-204	ENST00000534720	IL10RB	Q08334	325 aa		6.63	□□□□□ -1.35
NPIPA1-204	ENST00000534720	CDH17	Q12864	832 aa		6.63	□□□□□ -1.35
NPIPA1-204	ENST00000534720	NAB1	Q13506	487 aa		6.63	□□□□□ -1.35
NPIPA1-204	ENST00000534720	FRG1	Q14331	258 aa	Known RBP	6.63	□□□□□ -1.35
NPIPA1-204	ENST00000534720	SPARCL1	Q14515	664 aa		6.63	□□□□□ -1.35
NPIPA1-204	ENST00000534720	POLD3	Q15054	466 aa	Predicted RBP	6.63	□□□□□ -1.35
NPIPA1-204	ENST00000534720	SPANXN3	Q5MJ09	141 aa		6.63	□□□□□ -1.35
NPIPA1-204	ENST00000534720	RABGAP1L	Q5R372	815 aa		6.63	□□□□□ -1.35
NPIPA1-204	ENST00000534720	TTC39B	Q5VTQ0	682 aa	Predicted RBP	6.63	□□□□□ -1.35
NPIPA1-204	ENST00000534720	PTCRA	Q6ISU1	281 aa	Predicted RBP	6.63	□□□□□ -1.35
NPIPA1-204	ENST00000534720	CASC4	Q6P4E1	433 aa		6.63	□□□□□ -1.35
NPIPA1-204	ENST00000534720	ZNF449	Q6P9G9	518 aa		6.63	□□□□□ -1.35
NPIPA1-204	ENST00000534720	OTOP3	Q7RTS5	596 aa		6.63	□□□□□ -1.35
NPIPA1-204	ENST00000534720	TMC7	Q7Z402	723 aa		6.63	□□□□□ -1.35
NPIPA1-204	ENST00000534720	TMEM150A	Q86TG1	271 aa		6.63	□□□□□ -1.35
NPIPA1-204	ENST00000534720	PRPF39	Q86UA1	669 aa	Known RBP	6.63	□□□□□ -1.35
NPIPA1-204	ENST00000534720	LRRC6	Q86X45	466 aa		6.63	□□□□□ -1.35
NPIPA1-204	ENST00000534720	HERC6	Q8IVU3	1022 aa		6.63	□□□□□ -1.35
NPIPA1-204	ENST00000534720	CCDC117	Q8IWD4	279 aa	Predicted RBP	6.63	□□□□□ -1.35
NPIPA1-204	ENST00000534720	CNPY4	Q8N129	248 aa		6.63	□□□□□ -1.35
NPIPA1-204	ENST00000534720	TEX26	Q8N6G2	289 aa		6.63	□□□□□ -1.35
NPIPA1-204	ENST00000534720	BCAS4	Q8TDM0	211 aa		6.63	□□□□□ -1.35
NPIPA1-204	ENST00000534720	NSMCE1	Q8WV22	266 aa		6.63	□□□□□ -1.35
NPIPA1-204	ENST00000534720	TTC17	Q96AE7	1141 aa		6.63	□□□□□ -1.35
NPIPA1-204	ENST00000534720	MRRF	Q96E11	262 aa	Known RBP	6.63	□□□□□ -1.35
NPIPA1-204	ENST00000534720	OXNAD1	Q96HP4	312 aa	Predicted RBP	6.63	□□□□□ -1.35
NPIPA1-204	ENST00000534720	KLHL5	Q96PQ7	755 aa		6.63	□□□□□ -1.35
NPIPA1-204	ENST00000534720	SMC6	Q96SB8	1091 aa		6.63	□□□□□ -1.35
NPIPA1-204	ENST00000534720	DDX50	Q9BQ39	737 aa	Known RBP	6.63	□□□□□ -1.35
NPIPA1-204	ENST00000534720	MCOLN1	Q9GZU1	580 aa		6.63	□□□□□ -1.35
NPIPA1-204	ENST00000534720	RNF38	Q9H0F5	515 aa		6.63	□□□□□ -1.35
NPIPA1-204	ENST00000534720	MAGEH1	Q9H213	219 aa		6.63	□□□□□ -1.35
NPIPA1-204	ENST00000534720	SP110	Q9HB58	689 aa		6.63	□□□□□ -1.35
NPIPA1-204	ENST00000534720	KCNK9	Q9NPC2	374 aa		6.63	□□□□□ -1.35
NPIPA1-204	ENST00000534720	PPAN	Q9NQ55	473 aa	Known RBP	6.63	□□□□□ -1.35
NPIPA1-204	ENST00000534720	SYBU	Q9NX95	663 aa		6.63	□□□□□ -1.35
NPIPA1-204	ENST00000534720	SAMD15	Q9P1V8	674 aa		6.63	□□□□□ -1.35
NPIPA1-204	ENST00000534720	SMG5	Q9UPR3	1016 aa	Known RBP	6.63	□□□□□ -1.35
NPIPA1-204	ENST00000534720	RWDD3	Q9Y3V2	267 aa		6.63	□□□□□ -1.35
NPIPA1-204	ENST00000534720	SLC4A7	Q9Y6M7	1214 aa		6.63	□□□□□ -1.35
NPIPA1-204	ENST00000534720	NUP210	Q8TEM1	1887 aa	Predicted RBP	6.63	□□□□□ -1.35
NPIPA1-204	ENST00000534720	MYOF	Q9NZM1	2061 aa		6.63	□□□□□ -1.35
NPIPA1-204	ENST00000534720	ZC3H11B	A0A1B0GUI2	810 aa	Predicted RBP	6.62	□□□□□ -1.35
NPIPA1-204	ENST00000534720		A0A1W2PPM1	405 aa		6.62	□□□□□ -1.35
NPIPA1-204	ENST00000534720	GMNC	A6NCL1	334 aa		6.62	□□□□□ -1.35
NPIPA1-204	ENST00000534720	FAM47DP	A6NHR8	397 aa		6.62	□□□□□ -1.35
NPIPA1-204	ENST00000534720	CXorf49	A8MYA2	514 aa	Predicted RBP	6.62	□□□□□ -1.35
NPIPA1-204	ENST00000534720	CLDN11	O75508	207 aa		6.62	□□□□□ -1.35
NPIPA1-204	ENST00000534720	FAM155B	O75949	473 aa		6.62	□□□□□ -1.35
NPIPA1-204	ENST00000534720	USP1	O94782	785 aa		6.62	□□□□□ -1.35
NPIPA1-204	ENST00000534720	OLFM2	O95897	454 aa		6.62	□□□□□ -1.35
NPIPA1-204	ENST00000534720	LRG1	P02750	347 aa		6.62	□□□□□ -1.35
NPIPA1-204	ENST00000534720	POLB	P06746	335 aa		6.62	□□□□□ -1.35
NPIPA1-204	ENST00000534720	MBL2	P11226	248 aa	Predicted RBP	6.62	□□□□□ -1.35
NPIPA1-204	ENST00000534720	CORO1A	P31146	461 aa	Known RBP	6.62	□□□□□ -1.35
NPIPA1-204	ENST00000534720	GBP2	P32456	591 aa	Predicted RBP	6.62	□□□□□ -1.35
NPIPA1-204	ENST00000534720	CA8	P35219	290 aa		6.62	□□□□□ -1.35
NPIPA1-204	ENST00000534720	BMPR1A	P36894	532 aa		6.62	□□□□□ -1.35
NPIPA1-204	ENST00000534720	SERPINB9	P50453	376 aa		6.62	□□□□□ -1.35
NPIPA1-204	ENST00000534720	MPP3	Q13368	585 aa		6.62	□□□□□ -1.35
NPIPA1-204	ENST00000534720	SERINC3	Q13530	473 aa		6.62	□□□□□ -1.35
NPIPA1-204	ENST00000534720	CRYM	Q14894	314 aa		6.62	□□□□□ -1.35
NPIPA1-204	ENST00000534720	ADGRF1	Q5T601	910 aa		6.62	□□□□□ -1.35
NPIPA1-204	ENST00000534720	LGSN	Q5TDP6	509 aa		6.62	□□□□□ -1.35
NPIPA1-204	ENST00000534720	MARC1	Q5VT66	337 aa		6.62	□□□□□ -1.35
NPIPA1-204	ENST00000534720	TRMT10B	Q6PF06	316 aa	Known RBP	6.62	□□□□□ -1.35
NPIPA1-204	ENST00000534720	MARK2	Q7KZI7	788 aa	Known RBP	6.62	□□□□□ -1.35
NPIPA1-204	ENST00000534720	CHST9	Q7L1S5	443 aa		6.62	□□□□□ -1.35
NPIPA1-204	ENST00000534720	RTL10	Q7L3V2	364 aa		6.62	□□□□□ -1.35
NPIPA1-204	ENST00000534720	DENND1C	Q8IV53	801 aa		6.62	□□□□□ -1.35
NPIPA1-204	ENST00000534720	CTAGE3P	Q8IX95	158 aa		6.62	□□□□□ -1.35
NPIPA1-204	ENST00000534720	PPM1N	Q8N819	430 aa		6.62	□□□□□ -1.35
NPIPA1-204	ENST00000534720	DNAAF3	Q8N9W5	541 aa		6.62	□□□□□ -1.35
NPIPA1-204	ENST00000534720	ALKBH8	Q96BT7	664 aa	Known RBP	6.62	□□□□□ -1.35
NPIPA1-204	ENST00000534720	MYEOV	Q96EZ4	313 aa		6.62	□□□□□ -1.35
NPIPA1-204	ENST00000534720	ZNF419	Q96HQ0	510 aa	Predicted RBP	6.62	□□□□□ -1.35
NPIPA1-204	ENST00000534720	SGSM3	Q96HU1	749 aa		6.62	□□□□□ -1.35
NPIPA1-204	ENST00000534720	ZNF599	Q96NL3	588 aa		6.62	□□□□□ -1.35
NPIPA1-204	ENST00000534720	TBL1Y	Q9BQ87	522 aa		6.62	□□□□□ -1.35
NPIPA1-204	ENST00000534720	EMILIN2	Q9BXX0	1053 aa		6.62	□□□□□ -1.35
NPIPA1-204	ENST00000534720	IL22	Q9GZX6	179 aa		6.62	□□□□□ -1.35
NPIPA1-204	ENST00000534720	SLC25A51	Q9H1U9	297 aa		6.62	□□□□□ -1.35
NPIPA1-204	ENST00000534720	ZNF334	Q9HCZ1	680 aa	Predicted RBP	6.62	□□□□□ -1.35
NPIPA1-204	ENST00000534720	ENTPD7	Q9NQZ7	604 aa		6.62	□□□□□ -1.35
NPIPA1-204	ENST00000534720	SMYD2	Q9NRG4	433 aa		6.62	□□□□□ -1.35
NPIPA1-204	ENST00000534720	GKN1	Q9NS71	199 aa		6.62	□□□□□ -1.35
NPIPA1-204	ENST00000534720	NKIRAS1	Q9NYS0	192 aa		6.62	□□□□□ -1.35
NPIPA1-204	ENST00000534720	STOML2	Q9UJZ1	356 aa		6.62	□□□□□ -1.35
NPIPA1-204	ENST00000534720	ZFP37	Q9Y6Q3	630 aa	Predicted RBP	6.62	□□□□□ -1.35

Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms