RNA–Protein interactions for RNA: ENST00000533079.5

CAPN1-223, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 878 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-223ENST00000533079 AFPP02771 609 aaKnown RBP12.73□□□□□ -0.37
CAPN1-223ENST00000533079 CTSLP07711 333 aa12.73□□□□□ -0.37
CAPN1-223ENST00000533079 PFKFB1P16118 471 aa12.73□□□□□ -0.37
CAPN1-223ENST00000533079 CLCN6P51797 869 aa12.73□□□□□ -0.37
CAPN1-223ENST00000533079 PDX1P52945 283 aa12.73□□□□□ -0.37
CAPN1-223ENST00000533079 RPS21P63220 83 aaKnown RBP12.73□□□□□ -0.37
CAPN1-223ENST00000533079 KRT83P78385 493 aa12.73□□□□□ -0.37
CAPN1-223ENST00000533079 EIF4EBP2Q13542 120 aaPredicted RBP12.73□□□□□ -0.37
CAPN1-223ENST00000533079 SPIDRQ14159 915 aa12.73□□□□□ -0.37
CAPN1-223ENST00000533079 FZD2Q14332 565 aa12.73□□□□□ -0.37
CAPN1-223ENST00000533079 LINC00303Q3SY05 128 aa12.73□□□□□ -0.37
CAPN1-223ENST00000533079 ZC3H12AQ5D1E8 599 aaKnown RBP12.73□□□□□ -0.37
CAPN1-223ENST00000533079 COLEC12Q5KU26 742 aa12.73□□□□□ -0.37
CAPN1-223ENST00000533079 USP53Q70EK8 1073 aa12.73□□□□□ -0.37
CAPN1-223ENST00000533079 ERN2Q76MJ5 926 aaKnown RBP12.73□□□□□ -0.37
CAPN1-223ENST00000533079 ELOA2Q8IYF1 753 aaPredicted RBP12.73□□□□□ -0.37
CAPN1-223ENST00000533079 TFAP2BQ92481 460 aa12.73□□□□□ -0.37
CAPN1-223ENST00000533079 ARRDC3Q96B67 414 aa12.73□□□□□ -0.37
CAPN1-223ENST00000533079 ALG14Q96F25 216 aa12.73□□□□□ -0.37
CAPN1-223ENST00000533079 NOX5Q96PH1 765 aa12.73□□□□□ -0.37
CAPN1-223ENST00000533079 IL12RB2Q99665 862 aa12.73□□□□□ -0.37
CAPN1-223ENST00000533079 FEM1AQ9BSK4 669 aa12.73□□□□□ -0.37
CAPN1-223ENST00000533079 BOCQ9BWV1 1114 aa12.73□□□□□ -0.37
CAPN1-223ENST00000533079 GRPEL1Q9HAV7 217 aa12.73□□□□□ -0.37
CAPN1-223ENST00000533079 ZFR2Q9UPR6 939 aaKnown RBP12.73□□□□□ -0.37
CAPN1-223ENST00000533079 PTPN13Q12923 2485 aa12.73□□□□□ -0.37
CAPN1-223ENST00000533079 SYCE3A1L190 88 aa12.72□□□□□ -0.37
CAPN1-223ENST00000533079 TMX2-CTNND1H3BSU7 103 aa12.72□□□□□ -0.37
CAPN1-223ENST00000533079 PLD2O14939 933 aa12.72□□□□□ -0.37
CAPN1-223ENST00000533079 CLDN11O75508 207 aa12.72□□□□□ -0.37
CAPN1-223ENST00000533079 PCDH8O95206 1070 aa12.72□□□□□ -0.37
CAPN1-223ENST00000533079 TRUB2O95900 331 aaKnown RBP12.72□□□□□ -0.37
CAPN1-223ENST00000533079 LIPCP11150 499 aa12.72□□□□□ -0.37
CAPN1-223ENST00000533079 SRCP12931 536 aa12.72□□□□□ -0.37
CAPN1-223ENST00000533079 MYF5P13349 255 aa12.72□□□□□ -0.37
CAPN1-223ENST00000533079 CCR1P32246 355 aa12.72□□□□□ -0.37
CAPN1-223ENST00000533079 CHRNA3P32297 505 aa12.72□□□□□ -0.37
CAPN1-223ENST00000533079 NEK3P51956 506 aa12.72□□□□□ -0.37
CAPN1-223ENST00000533079 CLDN2P57739 230 aa12.72□□□□□ -0.37
CAPN1-223ENST00000533079 FOXR1Q6PIV2 292 aa12.72□□□□□ -0.37
CAPN1-223ENST00000533079 CIR1Q86X95 450 aaPredicted RBP12.72□□□□□ -0.37
CAPN1-223ENST00000533079 DENND6BQ8NEG7 585 aa12.72□□□□□ -0.37
CAPN1-223ENST00000533079 OR2A12Q8NGT7 310 aa12.72□□□□□ -0.37
CAPN1-223ENST00000533079 STK32AQ8WU08 396 aa12.72□□□□□ -0.37
CAPN1-223ENST00000533079 KLK6Q92876 244 aa12.72□□□□□ -0.37
CAPN1-223ENST00000533079 BMFQ96LC9 184 aa12.72□□□□□ -0.37
CAPN1-223ENST00000533079 TIGD1Q96MW7 591 aa12.72□□□□□ -0.37
CAPN1-223ENST00000533079 RPRD1AQ96P16 312 aaPredicted RBP12.72□□□□□ -0.37
CAPN1-223ENST00000533079 C2orf49Q9BVC5 232 aaPredicted RBP12.72□□□□□ -0.37
CAPN1-223ENST00000533079 NUP62CLQ9H1M0 184 aa12.72□□□□□ -0.37
CAPN1-223ENST00000533079 CLSTN2Q9H4D0 955 aa12.72□□□□□ -0.37
CAPN1-223ENST00000533079 SEPT3Q9UH03 358 aa12.72□□□□□ -0.37
CAPN1-223ENST00000533079 MAPK8IP1Q9UQF2 711 aa12.72□□□□□ -0.37
CAPN1-223ENST00000533079 HPSEQ9Y251 543 aa12.72□□□□□ -0.37
CAPN1-223ENST00000533079 OR51B4Q9Y5P0 310 aa12.72□□□□□ -0.37
CAPN1-223ENST00000533079 PIEZO2Q9H5I5 2752 aa12.71□□□□□ -0.37
CAPN1-223ENST00000533079 FPGTO14772 594 aa12.71□□□□□ -0.37
CAPN1-223ENST00000533079 AP1G1O43747 822 aa12.71□□□□□ -0.37
CAPN1-223ENST00000533079 BNIP3LO60238 219 aa12.71□□□□□ -0.37
CAPN1-223ENST00000533079 PPFIA2O75334 1257 aa12.71□□□□□ -0.37
CAPN1-223ENST00000533079 ITGB6P18564 788 aa12.71□□□□□ -0.37
CAPN1-223ENST00000533079 BRD2P25440 801 aaKnown RBP12.71□□□□□ -0.37
CAPN1-223ENST00000533079 YWHAZP63104 245 aaKnown RBP12.71□□□□□ -0.37
CAPN1-223ENST00000533079 DPYDQ12882 1025 aa12.71□□□□□ -0.37
CAPN1-223ENST00000533079 PDE1CQ14123 709 aaPredicted RBP12.71□□□□□ -0.37
CAPN1-223ENST00000533079 DEFB133Q30KQ1 61 aa12.71□□□□□ -0.37
CAPN1-223ENST00000533079 ZNF542PQ5EBM4 170 aa12.71□□□□□ -0.37
CAPN1-223ENST00000533079 SYPL2Q5VXT5 272 aa12.71□□□□□ -0.37
CAPN1-223ENST00000533079 SEL1L3Q68CR1 1132 aa12.71□□□□□ -0.37
CAPN1-223ENST00000533079 OR6B2Q6IFH4 312 aa12.71□□□□□ -0.37
CAPN1-223ENST00000533079 C14orf80Q86SX3 495 aa12.71□□□□□ -0.37
CAPN1-223ENST00000533079 FMR1NBQ8N0W7 255 aaPredicted RBP12.71□□□□□ -0.37
CAPN1-223ENST00000533079 NT5C1BQ96P26 610 aa12.71□□□□□ -0.37
CAPN1-223ENST00000533079 LENG8Q96PV6 779 aaPredicted RBP12.71□□□□□ -0.37
CAPN1-223ENST00000533079 MED15Q96RN5 788 aa12.71□□□□□ -0.37
CAPN1-223ENST00000533079 SLC17A9Q9BYT1 436 aa12.71□□□□□ -0.37
CAPN1-223ENST00000533079 ST7Q9NRC1 585 aa12.71□□□□□ -0.37
CAPN1-223ENST00000533079 SEPT10Q9P0V9 454 aa12.71□□□□□ -0.37
CAPN1-223ENST00000533079 ANKMY1Q9P2S6 941 aa12.71□□□□□ -0.37
CAPN1-223ENST00000533079 SPASTQ9UBP0 616 aa12.71□□□□□ -0.37
CAPN1-223ENST00000533079 IL36AQ9UHA7 158 aa12.71□□□□□ -0.37
CAPN1-223ENST00000533079 IPO11Q9UI26 975 aaKnown RBP12.71□□□□□ -0.37
CAPN1-223ENST00000533079 TBC1D30Q9Y2I9 924 aa12.71□□□□□ -0.37
CAPN1-223ENST00000533079 PCDHB4Q9Y5E5 795 aa12.71□□□□□ -0.37
CAPN1-223ENST00000533079 POM121BA6NF01 834 aa12.7□□□□□ -0.38
CAPN1-223ENST00000533079 NTN3O00634 580 aaPredicted RBP12.7□□□□□ -0.38
CAPN1-223ENST00000533079 MUSKO15146 869 aa12.7□□□□□ -0.38
CAPN1-223ENST00000533079 EFSO43281 561 aa12.7□□□□□ -0.38
CAPN1-223ENST00000533079 KRT10P13645 584 aa12.7□□□□□ -0.38
CAPN1-223ENST00000533079 JUNDP17535 347 aa12.7□□□□□ -0.38
CAPN1-223ENST00000533079 GPD2P43304 727 aa12.7□□□□□ -0.38
CAPN1-223ENST00000533079 NUMBP49757 651 aa12.7□□□□□ -0.38
CAPN1-223ENST00000533079 CDH4P55283 916 aa12.7□□□□□ -0.38
CAPN1-223ENST00000533079 CENPCQ03188 943 aa12.7□□□□□ -0.38
CAPN1-223ENST00000533079 PTK2BQ14289 1009 aa12.7□□□□□ -0.38
CAPN1-223ENST00000533079 PERM1Q5SV97 790 aa12.7□□□□□ -0.38
CAPN1-223ENST00000533079 ESRP1Q6NXG1 681 aaKnown RBP12.7□□□□□ -0.38
CAPN1-223ENST00000533079 FBXL22Q6P050 247 aa12.7□□□□□ -0.38
CAPN1-223ENST00000533079 DCAF4L2Q8NA75 395 aa12.7□□□□□ -0.38
CAPN1-223ENST00000533079 ATP11CQ8NB49 1132 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms