RNA–Protein interactions for RNA: ENST00000528494.5

ATG13-211, Transcript of autophagy related 13, humanhuman

TSL 1 (best) BASIC

Gene ATG13, Length 2,351 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG13-211ENST00000528494 LIN52Q52LA3 116 aa13.02□□□□□ -0.32
ATG13-211ENST00000528494 CENPUQ71F23 418 aa13.02□□□□□ -0.32
ATG13-211ENST00000528494 PID1Q7Z2X4 250 aa13.02□□□□□ -0.32
ATG13-211ENST00000528494 CIR1Q86X95 450 aaPredicted RBP13.02□□□□□ -0.32
ATG13-211ENST00000528494 AGAP3Q96P47 875 aa13.02□□□□□ -0.32
ATG13-211ENST00000528494 CYP2S1Q96SQ9 504 aa13.02□□□□□ -0.32
ATG13-211ENST00000528494 C17orf80Q9BSJ5 609 aa13.02□□□□□ -0.32
ATG13-211ENST00000528494 TMEM109Q9BVC6 243 aa13.02□□□□□ -0.32
ATG13-211ENST00000528494 RNF38Q9H0F5 515 aa13.02□□□□□ -0.32
ATG13-211ENST00000528494 ENTPD7Q9NQZ7 604 aa13.02□□□□□ -0.32
ATG13-211ENST00000528494 PIH1D1Q9NWS0 290 aaKnown RBP13.02□□□□□ -0.32
ATG13-211ENST00000528494 COMMD8Q9NX08 183 aa13.02□□□□□ -0.32
ATG13-211ENST00000528494 HAO1Q9UJM8 370 aa13.02□□□□□ -0.32
ATG13-211ENST00000528494 DNMT3LQ9UJW3 386 aa13.02□□□□□ -0.32
ATG13-211ENST00000528494 CHMP2BQ9UQN3 213 aa13.02□□□□□ -0.32
ATG13-211ENST00000528494 NUP205Q92621 2012 aa13.02□□□□□ -0.33
ATG13-211ENST00000528494 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP13.02□□□□□ -0.33
ATG13-211ENST00000528494 PIAS1O75925 651 aa13.02□□□□□ -0.33
ATG13-211ENST00000528494 CNTN5O94779 1100 aa13.02□□□□□ -0.33
ATG13-211ENST00000528494 ASLP04424 464 aa13.02□□□□□ -0.33
ATG13-211ENST00000528494 IRF1P10914 325 aa13.02□□□□□ -0.33
ATG13-211ENST00000528494 TARSP26639 723 aaKnown RBP13.02□□□□□ -0.33
ATG13-211ENST00000528494 SERPINB6P35237 376 aa13.02□□□□□ -0.33
ATG13-211ENST00000528494 GARSP41250 739 aaKnown RBP13.02□□□□□ -0.33
ATG13-211ENST00000528494 EPHB3P54753 998 aa13.02□□□□□ -0.33
ATG13-211ENST00000528494 ARL4CP56559 192 aa13.02□□□□□ -0.33
ATG13-211ENST00000528494 WASHC5Q12768 1159 aa13.02□□□□□ -0.33
ATG13-211ENST00000528494 KCNJ11Q14654 390 aa13.02□□□□□ -0.33
ATG13-211ENST00000528494 TNFAIP8L3Q5GJ75 292 aa13.02□□□□□ -0.33
ATG13-211ENST00000528494 HECTD3Q5T447 861 aa13.02□□□□□ -0.33
ATG13-211ENST00000528494 ARTNQ5T4W7 220 aa13.02□□□□□ -0.33
ATG13-211ENST00000528494 PLPP4Q5VZY2 271 aa13.02□□□□□ -0.33
ATG13-211ENST00000528494 ZNF567Q8N184 647 aa13.02□□□□□ -0.33
ATG13-211ENST00000528494 ATP6V0D2Q8N8Y2 350 aa13.02□□□□□ -0.33
ATG13-211ENST00000528494 PPFIBP2Q8ND30 876 aa13.02□□□□□ -0.33
ATG13-211ENST00000528494 GRAMD1AQ96CP6 724 aa13.02□□□□□ -0.33
ATG13-211ENST00000528494 MYEOVQ96EZ4 313 aa13.02□□□□□ -0.33
ATG13-211ENST00000528494 BTN2A3PQ96KV6 586 aa13.02□□□□□ -0.33
ATG13-211ENST00000528494 LBHD1Q9BQE6 289 aaPredicted RBP13.02□□□□□ -0.33
ATG13-211ENST00000528494 MYLK2Q9H1R3 596 aa13.02□□□□□ -0.33
ATG13-211ENST00000528494 CATSPERBQ9H7T0 1116 aa13.02□□□□□ -0.33
ATG13-211ENST00000528494 TRPC7Q9HCX4 862 aa13.02□□□□□ -0.33
ATG13-211ENST00000528494 SMPD4Q9NXE4 827 aa13.02□□□□□ -0.33
ATG13-211ENST00000528494 USH1CQ9Y6N9 552 aa13.02□□□□□ -0.33
ATG13-211ENST00000528494 PTPRSQ13332 1948 aa13.02□□□□□ -0.33
ATG13-211ENST00000528494 hCG_2014768A0A024R1R8 64 aa13.01□□□□□ -0.33
ATG13-211ENST00000528494 A0A0A0MRY4 1105 aa13.01□□□□□ -0.33
ATG13-211ENST00000528494 TRDMT1O14717 391 aaKnown RBP13.01□□□□□ -0.33
ATG13-211ENST00000528494 RASGRF2O14827 1237 aa13.01□□□□□ -0.33
ATG13-211ENST00000528494 ARHGEF15O94989 841 aa13.01□□□□□ -0.33
ATG13-211ENST00000528494 HNRNPCP07910 306 aaKnown RBP eCLIP13.01□□□□□ -0.33
ATG13-211ENST00000528494 DNAJB1P25685 340 aa13.01□□□□□ -0.33
ATG13-211ENST00000528494 CCNFP41002 786 aa13.01□□□□□ -0.33
ATG13-211ENST00000528494 GRIA1P42261 906 aa13.01□□□□□ -0.33
ATG13-211ENST00000528494 TMED1Q13445 227 aa13.01□□□□□ -0.33
ATG13-211ENST00000528494 ALFQ53S48 1182 aa13.01□□□□□ -0.33
ATG13-211ENST00000528494 MANEALQ5VSG8 457 aa13.01□□□□□ -0.33
ATG13-211ENST00000528494 FAM109BQ6ICB4 259 aaPredicted RBP13.01□□□□□ -0.33
ATG13-211ENST00000528494 FBXL22Q6P050 247 aa13.01□□□□□ -0.33
ATG13-211ENST00000528494 RFWD3Q6PCD5 774 aa13.01□□□□□ -0.33
ATG13-211ENST00000528494 TCEAL8Q8IYN2 117 aa13.01□□□□□ -0.33
ATG13-211ENST00000528494 PDIK1LQ8N165 341 aa13.01□□□□□ -0.33
ATG13-211ENST00000528494 USP33Q8TEY7 942 aa13.01□□□□□ -0.33
ATG13-211ENST00000528494 CKAP2Q8WWK9 683 aa13.01□□□□□ -0.33
ATG13-211ENST00000528494 HERVK_113Q902F9 699 aa13.01□□□□□ -0.33
ATG13-211ENST00000528494 IGSF8Q969P0 613 aa13.01□□□□□ -0.33
ATG13-211ENST00000528494 MRRFQ96E11 262 aaKnown RBP13.01□□□□□ -0.33
ATG13-211ENST00000528494 SPATA13Q96N96 652 aa13.01□□□□□ -0.33
ATG13-211ENST00000528494 SLC39A8Q9C0K1 460 aa13.01□□□□□ -0.33
ATG13-211ENST00000528494 VPS37BQ9H9H4 285 aa13.01□□□□□ -0.33
ATG13-211ENST00000528494 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP13.01□□□□□ -0.33
ATG13-211ENST00000528494 KLHL8Q9P2G9 620 aaPredicted RBP13.01□□□□□ -0.33
ATG13-211ENST00000528494 SUN2Q9UH99 717 aa13.01□□□□□ -0.33
ATG13-211ENST00000528494 TTLL3Q9Y4R7 772 aa13.01□□□□□ -0.33
ATG13-211ENST00000528494 COL4A4P53420 1690 aaPredicted RBP13.01□□□□□ -0.33
ATG13-211ENST00000528494 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP13.01□□□□□ -0.33
ATG13-211ENST00000528494 STK10O94804 968 aaKnown RBP13.01□□□□□ -0.33
ATG13-211ENST00000528494 LYNP07948 512 aa13.01□□□□□ -0.33
ATG13-211ENST00000528494 MX2P20592 715 aa13.01□□□□□ -0.33
ATG13-211ENST00000528494 BMPR1AP36894 532 aa13.01□□□□□ -0.33
ATG13-211ENST00000528494 ZNF135P52742 658 aaPredicted RBP13.01□□□□□ -0.33
ATG13-211ENST00000528494 GALNT2Q10471 571 aa13.01□□□□□ -0.33
ATG13-211ENST00000528494 KHDC1Q4VXA5 237 aaKnown RBP13.01□□□□□ -0.33
ATG13-211ENST00000528494 DENND1CQ8IV53 801 aa13.01□□□□□ -0.33
ATG13-211ENST00000528494 CFAP52Q8N1V2 620 aa13.01□□□□□ -0.33
ATG13-211ENST00000528494 PYROXD1Q8WU10 500 aa13.01□□□□□ -0.33
ATG13-211ENST00000528494 C1orf74Q96LT6 269 aa13.01□□□□□ -0.33
ATG13-211ENST00000528494 RPRD1AQ96P16 312 aaPredicted RBP13.01□□□□□ -0.33
ATG13-211ENST00000528494 FERMT1Q9BQL6 677 aa13.01□□□□□ -0.33
ATG13-211ENST00000528494 ZNF334Q9HCZ1 680 aaPredicted RBP13.01□□□□□ -0.33
ATG13-211ENST00000528494 SPATA7Q9P0W8 599 aa13.01□□□□□ -0.33
ATG13-211ENST00000528494 FNIP2Q9P278 1114 aa13.01□□□□□ -0.33
ATG13-211ENST00000528494 TMEM120BA0PK00 339 aa13□□□□□ -0.33
ATG13-211ENST00000528494 CHADO15335 359 aa13□□□□□ -0.33
ATG13-211ENST00000528494 JCHAINP01591 159 aa13□□□□□ -0.33
ATG13-211ENST00000528494 ITGA2BP08514 1039 aa13□□□□□ -0.33
ATG13-211ENST00000528494 UBTFL6P0CB48 400 aaPredicted RBP13□□□□□ -0.33
ATG13-211ENST00000528494 ZCCHC18P0CG32 403 aa13□□□□□ -0.33
ATG13-211ENST00000528494 PTPN3P26045 913 aa13□□□□□ -0.33
ATG13-211ENST00000528494 PSMB4P28070 264 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms